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The map label for this gene is cspG [H]

Identifier: 157963078

GI number: 157963078

Start: 3999616

End: 3999825

Strand: Direct

Name: cspG [H]

Synonym: Spea_3261

Alternate gene names: 157963078

Gene position: 3999616-3999825 (Clockwise)

Preceding gene: 157963077

Following gene: 157963079

Centisome position: 77.29

GC content: 43.81

Gene sequence:

>210_bases
ATGTCTAATACAACTGGTATCGTAAAATGGTTTAACGAAGAGAAAGGTTTTGGTTTCATTACTCAAGACAACGGCGGCGC
TGACGTATTCGTTCACTTCCGTGCAATCACTTCAGACGGCTTCAAGACTTTGGCTGAAGGCCAGAAAGTATCTTTCGAAG
TAGAGCAAGGTCAAAAAGGCCTTCAAGCAGCTAACGTAATCGCGCTGTAA

Upstream 100 bases:

>100_bases
GTTTTCCCTTATCTTCATCATCACATTAAATAATTCAATTTTTCAGTGCATCGCATAATGCGACAATTTTTTATGAATTT
AAATATATAAGGGACACAAC

Downstream 100 bases:

>100_bases
CTTCGTAAGTTGACGTAAATGGTTTTATAACCATTTACGTCATTTCAAACTAACGCCAAAACACTAACGTTAGTAAATCA
ACTTCAACAAAAATGCTTTA

Product: cold-shock DNA-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 69; Mature: 68

Protein sequence:

>69_residues
MSNTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAITSDGFKTLAEGQKVSFEVEQGQKGLQAANVIAL

Sequences:

>Translated_69_residues
MSNTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAITSDGFKTLAEGQKVSFEVEQGQKGLQAANVIAL
>Mature_68_residues
SNTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAITSDGFKTLAEGQKVSFEVEQGQKGLQAANVIAL

Specific function: Unknown

COG id: COG1278

COG function: function code K; Cold shock proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CSD (cold-shock) domain [H]

Homologues:

Organism=Escherichia coli, GI1786841, Length=69, Percent_Identity=68.1159420289855, Blast_Score=97, Evalue=2e-22,
Organism=Escherichia coli, GI2367114, Length=70, Percent_Identity=65.7142857142857, Blast_Score=94, Evalue=1e-21,
Organism=Escherichia coli, GI1789979, Length=65, Percent_Identity=67.6923076923077, Blast_Score=94, Evalue=2e-21,
Organism=Escherichia coli, GI1788126, Length=69, Percent_Identity=63.768115942029, Blast_Score=90, Evalue=3e-20,
Organism=Escherichia coli, GI1787839, Length=68, Percent_Identity=63.2352941176471, Blast_Score=88, Evalue=1e-19,
Organism=Escherichia coli, GI1787834, Length=70, Percent_Identity=62.8571428571429, Blast_Score=88, Evalue=1e-19,
Organism=Escherichia coli, GI1787107, Length=64, Percent_Identity=50, Blast_Score=75, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24658520, Length=61, Percent_Identity=45.9016393442623, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019844
- InterPro:   IPR012156
- InterPro:   IPR011129
- InterPro:   IPR002059
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF00313 CSD [H]

EC number: NA

Molecular weight: Translated: 7481; Mature: 7350

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS00352 COLD_SHOCK

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAITSDGFKTLAEGQKVSFEVEQGQKG
CCCCCCEEEEECCCCCCEEEEECCCCCEEEEEEEEECCCCCHHHCCCCEEEEEECCCCCC
LQAANVIAL
CCCEEEEEC
>Mature Secondary Structure 
SNTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAITSDGFKTLAEGQKVSFEVEQGQKG
CCCCCEEEEECCCCCCEEEEECCCCCEEEEEEEEECCCCCHHHCCCCEEEEEECCCCCC
LQAANVIAL
CCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10483731 [H]