| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yghU [H]
Identifier: 157963057
GI number: 157963057
Start: 3975003
End: 3975860
Strand: Direct
Name: yghU [H]
Synonym: Spea_3240
Alternate gene names: 157963057
Gene position: 3975003-3975860 (Clockwise)
Preceding gene: 157963056
Following gene: 157963060
Centisome position: 76.82
GC content: 48.95
Gene sequence:
>858_bases ATGACGAAGCAATACACCCCCGCGAAAGTTTGGAGCATGGATATCGAAAATGGAGGCGAGTGGGCCAGTATTAACCGCCC CGACTCAGGTGCTAGGCATGAGCAAGCATTGCCAGCGGGGAAACAGCCACTGCAGCTGCACTCTTTAGCTACACCAAATG GCCAAAAGGTCACCATCATGTTGGAAGAGTTGTTAGCTAAAGGCGTTAAAGCTGCTGAGTATGACGCCTATAAAATCAAT ATTGGCGAGAGTGAGCAGTTCAGCTCAGGTTTTGTCGATATTAATCCCAACTCGAAAATACCTGCGCTACTTGATACCTC AACGAATGAGCCTATACGTGTCTTTGAGTCAGGAAATATCCTGCTGTATTTAGCCGAGAAGTTTGGTCACTTTTTACCGA CCGAGCTAGCCGCTAAAACCGAGGTGATGAATTGGCTATTTTGGCTACAAGGCTCAGCCCCCTATCTTGGTGGCGGTTTC GGCCATTTCTATGCCTATGCACCAGAAAAGTTTGAATACCCTATTAACCGTTTCGCTATGGAAACCAAGCGCCAACTCGA TGTGCTCGATAAGCAGCTTGCCAATAATCAGTTCATCGGCGGCAGTGAATACAGTATCGCCGATATCGCAATCTGGCCTT GGTATGGCAACTTAGTCTTAGGTAACTTGTACGAAGCCGCTGAGTTTTTAGATGTCTCTAGCTACAAACATCTACAGCGC TGGGCAAAACAGATAAGCGAGCGCGACGCCGTTAAGCGCGGCCGTATCGTTAACCGCTCATGGGGCGAGGAGTGGGAGCA ACTGAGGGAGCGCCACTGCGCCGAAGATATCGATGCAGTGCTAAACAAAAAGCCATAG
Upstream 100 bases:
>100_bases ATAAATTGACCCGATATCAATATCCATAGCGCTCGGTACTCAAAACCGTTCGACTCGTATTACAACGCAATTGACGGGGC TAATCCCCATAGGACATGAC
Downstream 100 bases:
>100_bases GGCTATCACAAATACAGAAAAGGCGCTAAGTGAGCATACCAAGCGCCTTTTGAATAACAATATCAATTAAACAACTAGCT ACCAACACCACTGCGGCTTA
Product: putative glutathione S-transferase YghU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MTKQYTPAKVWSMDIENGGEWASINRPDSGARHEQALPAGKQPLQLHSLATPNGQKVTIMLEELLAKGVKAAEYDAYKIN IGESEQFSSGFVDINPNSKIPALLDTSTNEPIRVFESGNILLYLAEKFGHFLPTELAAKTEVMNWLFWLQGSAPYLGGGF GHFYAYAPEKFEYPINRFAMETKRQLDVLDKQLANNQFIGGSEYSIADIAIWPWYGNLVLGNLYEAAEFLDVSSYKHLQR WAKQISERDAVKRGRIVNRSWGEEWEQLRERHCAEDIDAVLNKKP
Sequences:
>Translated_285_residues MTKQYTPAKVWSMDIENGGEWASINRPDSGARHEQALPAGKQPLQLHSLATPNGQKVTIMLEELLAKGVKAAEYDAYKIN IGESEQFSSGFVDINPNSKIPALLDTSTNEPIRVFESGNILLYLAEKFGHFLPTELAAKTEVMNWLFWLQGSAPYLGGGF GHFYAYAPEKFEYPINRFAMETKRQLDVLDKQLANNQFIGGSEYSIADIAIWPWYGNLVLGNLYEAAEFLDVSSYKHLQR WAKQISERDAVKRGRIVNRSWGEEWEQLRERHCAEDIDAVLNKKP >Mature_284_residues TKQYTPAKVWSMDIENGGEWASINRPDSGARHEQALPAGKQPLQLHSLATPNGQKVTIMLEELLAKGVKAAEYDAYKINI GESEQFSSGFVDINPNSKIPALLDTSTNEPIRVFESGNILLYLAEKFGHFLPTELAAKTEVMNWLFWLQGSAPYLGGGFG HFYAYAPEKFEYPINRFAMETKRQLDVLDKQLANNQFIGGSEYSIADIAIWPWYGNLVLGNLYEAAEFLDVSSYKHLQRW AKQISERDAVKRGRIVNRSWGEEWEQLRERHCAEDIDAVLNKKP
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87082195, Length=275, Percent_Identity=70.5454545454545, Blast_Score=408, Evalue=1e-115, Organism=Escherichia coli, GI1788640, Length=211, Percent_Identity=38.8625592417062, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI87081789, Length=169, Percent_Identity=27.810650887574, Blast_Score=61, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6324100, Length=257, Percent_Identity=26.8482490272374, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 32318; Mature: 32187
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKQYTPAKVWSMDIENGGEWASINRPDSGARHEQALPAGKQPLQLHSLATPNGQKVTIM CCCCCCCCEEEEEECCCCCCEEECCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCEEEEE LEELLAKGVKAAEYDAYKINIGESEQFSSGFVDINPNSKIPALLDTSTNEPIRVFESGNI HHHHHHCCCCCCCCCEEEEECCCCCHHCCCCEEECCCCCCCEEEECCCCCCEEEEECCCE LLYLAEKFGHFLPTELAAKTEVMNWLFWLQGSAPYLGGGFGHFYAYAPEKFEYPINRFAM EEEEEHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCHHCCCHHHHHH ETKRQLDVLDKQLANNQFIGGSEYSIADIAIWPWYGNLVLGNLYEAAEFLDVSSYKHLQR HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH WAKQISERDAVKRGRIVNRSWGEEWEQLRERHCAEDIDAVLNKKP HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TKQYTPAKVWSMDIENGGEWASINRPDSGARHEQALPAGKQPLQLHSLATPNGQKVTIM CCCCCCCEEEEEECCCCCCEEECCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCEEEEE LEELLAKGVKAAEYDAYKINIGESEQFSSGFVDINPNSKIPALLDTSTNEPIRVFESGNI HHHHHHCCCCCCCCCEEEEECCCCCHHCCCCEEECCCCCCCEEEECCCCCCEEEEECCCE LLYLAEKFGHFLPTELAAKTEVMNWLFWLQGSAPYLGGGFGHFYAYAPEKFEYPINRFAM EEEEEHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCHHCCCHHHHHH ETKRQLDVLDKQLANNQFIGGSEYSIADIAIWPWYGNLVLGNLYEAAEFLDVSSYKHLQR HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH WAKQISERDAVKRGRIVNRSWGEEWEQLRERHCAEDIDAVLNKKP HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]