Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is yghU [H]

Identifier: 157963057

GI number: 157963057

Start: 3975003

End: 3975860

Strand: Direct

Name: yghU [H]

Synonym: Spea_3240

Alternate gene names: 157963057

Gene position: 3975003-3975860 (Clockwise)

Preceding gene: 157963056

Following gene: 157963060

Centisome position: 76.82

GC content: 48.95

Gene sequence:

>858_bases
ATGACGAAGCAATACACCCCCGCGAAAGTTTGGAGCATGGATATCGAAAATGGAGGCGAGTGGGCCAGTATTAACCGCCC
CGACTCAGGTGCTAGGCATGAGCAAGCATTGCCAGCGGGGAAACAGCCACTGCAGCTGCACTCTTTAGCTACACCAAATG
GCCAAAAGGTCACCATCATGTTGGAAGAGTTGTTAGCTAAAGGCGTTAAAGCTGCTGAGTATGACGCCTATAAAATCAAT
ATTGGCGAGAGTGAGCAGTTCAGCTCAGGTTTTGTCGATATTAATCCCAACTCGAAAATACCTGCGCTACTTGATACCTC
AACGAATGAGCCTATACGTGTCTTTGAGTCAGGAAATATCCTGCTGTATTTAGCCGAGAAGTTTGGTCACTTTTTACCGA
CCGAGCTAGCCGCTAAAACCGAGGTGATGAATTGGCTATTTTGGCTACAAGGCTCAGCCCCCTATCTTGGTGGCGGTTTC
GGCCATTTCTATGCCTATGCACCAGAAAAGTTTGAATACCCTATTAACCGTTTCGCTATGGAAACCAAGCGCCAACTCGA
TGTGCTCGATAAGCAGCTTGCCAATAATCAGTTCATCGGCGGCAGTGAATACAGTATCGCCGATATCGCAATCTGGCCTT
GGTATGGCAACTTAGTCTTAGGTAACTTGTACGAAGCCGCTGAGTTTTTAGATGTCTCTAGCTACAAACATCTACAGCGC
TGGGCAAAACAGATAAGCGAGCGCGACGCCGTTAAGCGCGGCCGTATCGTTAACCGCTCATGGGGCGAGGAGTGGGAGCA
ACTGAGGGAGCGCCACTGCGCCGAAGATATCGATGCAGTGCTAAACAAAAAGCCATAG

Upstream 100 bases:

>100_bases
ATAAATTGACCCGATATCAATATCCATAGCGCTCGGTACTCAAAACCGTTCGACTCGTATTACAACGCAATTGACGGGGC
TAATCCCCATAGGACATGAC

Downstream 100 bases:

>100_bases
GGCTATCACAAATACAGAAAAGGCGCTAAGTGAGCATACCAAGCGCCTTTTGAATAACAATATCAATTAAACAACTAGCT
ACCAACACCACTGCGGCTTA

Product: putative glutathione S-transferase YghU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MTKQYTPAKVWSMDIENGGEWASINRPDSGARHEQALPAGKQPLQLHSLATPNGQKVTIMLEELLAKGVKAAEYDAYKIN
IGESEQFSSGFVDINPNSKIPALLDTSTNEPIRVFESGNILLYLAEKFGHFLPTELAAKTEVMNWLFWLQGSAPYLGGGF
GHFYAYAPEKFEYPINRFAMETKRQLDVLDKQLANNQFIGGSEYSIADIAIWPWYGNLVLGNLYEAAEFLDVSSYKHLQR
WAKQISERDAVKRGRIVNRSWGEEWEQLRERHCAEDIDAVLNKKP

Sequences:

>Translated_285_residues
MTKQYTPAKVWSMDIENGGEWASINRPDSGARHEQALPAGKQPLQLHSLATPNGQKVTIMLEELLAKGVKAAEYDAYKIN
IGESEQFSSGFVDINPNSKIPALLDTSTNEPIRVFESGNILLYLAEKFGHFLPTELAAKTEVMNWLFWLQGSAPYLGGGF
GHFYAYAPEKFEYPINRFAMETKRQLDVLDKQLANNQFIGGSEYSIADIAIWPWYGNLVLGNLYEAAEFLDVSSYKHLQR
WAKQISERDAVKRGRIVNRSWGEEWEQLRERHCAEDIDAVLNKKP
>Mature_284_residues
TKQYTPAKVWSMDIENGGEWASINRPDSGARHEQALPAGKQPLQLHSLATPNGQKVTIMLEELLAKGVKAAEYDAYKINI
GESEQFSSGFVDINPNSKIPALLDTSTNEPIRVFESGNILLYLAEKFGHFLPTELAAKTEVMNWLFWLQGSAPYLGGGFG
HFYAYAPEKFEYPINRFAMETKRQLDVLDKQLANNQFIGGSEYSIADIAIWPWYGNLVLGNLYEAAEFLDVSSYKHLQRW
AKQISERDAVKRGRIVNRSWGEEWEQLRERHCAEDIDAVLNKKP

Specific function: Unknown

COG id: COG0625

COG function: function code O; Glutathione S-transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI87082195, Length=275, Percent_Identity=70.5454545454545, Blast_Score=408, Evalue=1e-115,
Organism=Escherichia coli, GI1788640, Length=211, Percent_Identity=38.8625592417062, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI87081789, Length=169, Percent_Identity=27.810650887574, Blast_Score=61, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI6324100, Length=257, Percent_Identity=26.8482490272374, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 32318; Mature: 32187

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKQYTPAKVWSMDIENGGEWASINRPDSGARHEQALPAGKQPLQLHSLATPNGQKVTIM
CCCCCCCCEEEEEECCCCCCEEECCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCEEEEE
LEELLAKGVKAAEYDAYKINIGESEQFSSGFVDINPNSKIPALLDTSTNEPIRVFESGNI
HHHHHHCCCCCCCCCEEEEECCCCCHHCCCCEEECCCCCCCEEEECCCCCCEEEEECCCE
LLYLAEKFGHFLPTELAAKTEVMNWLFWLQGSAPYLGGGFGHFYAYAPEKFEYPINRFAM
EEEEEHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCHHCCCHHHHHH
ETKRQLDVLDKQLANNQFIGGSEYSIADIAIWPWYGNLVLGNLYEAAEFLDVSSYKHLQR
HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
WAKQISERDAVKRGRIVNRSWGEEWEQLRERHCAEDIDAVLNKKP
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TKQYTPAKVWSMDIENGGEWASINRPDSGARHEQALPAGKQPLQLHSLATPNGQKVTIM
CCCCCCCEEEEEECCCCCCEEECCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCEEEEE
LEELLAKGVKAAEYDAYKINIGESEQFSSGFVDINPNSKIPALLDTSTNEPIRVFESGNI
HHHHHHCCCCCCCCCEEEEECCCCCHHCCCCEEECCCCCCCEEEECCCCCCEEEEECCCE
LLYLAEKFGHFLPTELAAKTEVMNWLFWLQGSAPYLGGGFGHFYAYAPEKFEYPINRFAM
EEEEEHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCHHCCCHHHHHH
ETKRQLDVLDKQLANNQFIGGSEYSIADIAIWPWYGNLVLGNLYEAAEFLDVSSYKHLQR
HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
WAKQISERDAVKRGRIVNRSWGEEWEQLRERHCAEDIDAVLNKKP
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]