| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962996
Identifier: 157962996
GI number: 157962996
Start: 3899146
End: 3899550
Strand: Direct
Name: 157962996
Synonym: Spea_3179
Alternate gene names: NA
Gene position: 3899146-3899550 (Clockwise)
Preceding gene: 157962995
Following gene: 157962997
Centisome position: 75.35
GC content: 44.2
Gene sequence:
>405_bases ATGAACGATATCATTGAGCAACTGCAAGAGATGAGTGAAACGGTTCCCGTACCGTTAGAGCTAGCGACATTTGAGCAAAT TGTTGAAGTGGAAGAAGAAATTCTTATTCCACTGCCTATGGAGCTGAAAGAATACTTACTCTATGCCAGTGATGTAATTT GTGGCAGCTTAGAACCTGTTACAGCAAGCGACCCTAACTCGCATACTTACTTGTCAGAAGTGACCTCGTATGCATGGTCG ATTGGCTTGCCGCGTGAGTTTGTGCCTATTTGTCAGCAAGGTGATAACTTCTTCTTTATTAGCCAAGAAGGCCAGATTCA GTTATGGCAAGATGGCGAAATTGACGAAGAAGAAACTTGGGAGTCATTTTGGGACTGGGCCGAAGACGTATGGATGCGTA GCTAA
Upstream 100 bases:
>100_bases AGACGCTGAAGATTAAATTAGCGCACTAACCTGCACTTCCTGCTAATTTGCGGTTATACTCCGCCCCAATAGTCTATACA GCCAGATACCCCGAAAACTT
Downstream 100 bases:
>100_bases CTTAATCGACACATTAATTAGTTAACTTTTAGCAGCATAGCGACACATTTATTAAGGAAACAAGATGTCTAAAGAACTTG GTTTAAATGCCATTGAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MNDIIEQLQEMSETVPVPLELATFEQIVEVEEEILIPLPMELKEYLLYASDVICGSLEPVTASDPNSHTYLSEVTSYAWS IGLPREFVPICQQGDNFFFISQEGQIQLWQDGEIDEEETWESFWDWAEDVWMRS
Sequences:
>Translated_134_residues MNDIIEQLQEMSETVPVPLELATFEQIVEVEEEILIPLPMELKEYLLYASDVICGSLEPVTASDPNSHTYLSEVTSYAWS IGLPREFVPICQQGDNFFFISQEGQIQLWQDGEIDEEETWESFWDWAEDVWMRS >Mature_134_residues MNDIIEQLQEMSETVPVPLELATFEQIVEVEEEILIPLPMELKEYLLYASDVICGSLEPVTASDPNSHTYLSEVTSYAWS IGLPREFVPICQQGDNFFFISQEGQIQLWQDGEIDEEETWESFWDWAEDVWMRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15584; Mature: 15584
Theoretical pI: Translated: 3.32; Mature: 3.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDIIEQLQEMSETVPVPLELATFEQIVEVEEEILIPLPMELKEYLLYASDVICGSLEPV CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC TASDPNSHTYLSEVTSYAWSIGLPREFVPICQQGDNFFFISQEGQIQLWQDGEIDEEETW CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCEEEECCCCCCHHHHH ESFWDWAEDVWMRS HHHHHHHHHHHCCC >Mature Secondary Structure MNDIIEQLQEMSETVPVPLELATFEQIVEVEEEILIPLPMELKEYLLYASDVICGSLEPV CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC TASDPNSHTYLSEVTSYAWSIGLPREFVPICQQGDNFFFISQEGQIQLWQDGEIDEEETW CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCEEEECCCCCCHHHHH ESFWDWAEDVWMRS HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA