Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962990

Identifier: 157962990

GI number: 157962990

Start: 3886779

End: 3887720

Strand: Direct

Name: 157962990

Synonym: Spea_3173

Alternate gene names: NA

Gene position: 3886779-3887720 (Clockwise)

Preceding gene: 157962989

Following gene: 157962992

Centisome position: 75.11

GC content: 44.69

Gene sequence:

>942_bases
ATGAAACTCTCATTCATTAGTACACTCATGGCAAGTACGCTTTTTTTAACCAATATAGTTATTGCAGGCGAAGCTATCGA
ACAACAGCAGACCGTTCAAGGCAATCCGTTAGTTAAAGTCAAAGTGCAACGCGGGAGTGTTACCTTTAAGTCTTGGGATA
AGAATGAGATAGCGGTAAAGGGAACCCTTGACGACCTCAGCGAAGGTTTCACCTTTTCAGTCAAAGGTAACAATGTCACC
ATTGAGGACACCCTGCCCCGTCAATACAGTGGTAATAACACTGAGGGCTCAGAGTTAGTCATCACTCTTCCTCGCAAGCT
TAAGCTTGAAGCAGAGGGCGTATCGGCAAACTACAGTCTAGATAACCTCCAAGGAGCACTAGAGGTAAGCTCCGTCAGCG
GCAATATCAAAGCCACAACTCTTAGTGACAAGACCATGTTGCAAACCGTATCAGGTGATATTTTGACTCGAGGTTTAACA
GGTAAGAGTCAGCTGCAAACGGTTTCTGGTGATATAAAAGATACCCAAAGCACGGGCACATTAAGCTATCAAATGGTGAG
CGGTGAATTAACGACCGATACTCAGGCCAGTAAAGTTTCCATAGAATCAGTTTCAGGCGATTCAACCATTGCACTTGGCA
GTATTGATACTCTGTCTGTCAAAACCGTGAGTGGTGATGTGGAACTGTCACTCAACAGCTTACAAAACCGCGCCAAATTG
GGCAGTGTCAGTGGTGATATCGAGATGCGATTTCTTGGCGATACCGATGTGAGCTTCAATATTAACGGCGGCCCCAGTGG
CAAGATCAATAATAAGTTAACCGACGACAAGGTGACAAAAGAGAAATACTCGCCCCAAAGCTACTTAAAGTTCCAAACCG
GTGATGGCCTCGCAGAACTCAATGCTTCTACTATTAGCGGTAAAATTGAGTTACTGAAGTAA

Upstream 100 bases:

>100_bases
AACTTTGGCAACTCTGGCTTTGGACTCAACAAAGAGAAATAGAGTTATTACAACAAGGCCAGACACTGCCAGTTAACCCA
TTACCTCAAGGAGCTTTAAT

Downstream 100 bases:

>100_bases
TTAAATTATAACTTTTCAGGGATTAAACAGATGCAGCTAGTAAAGAATCAGCTGCATCATATAATGTATAATATATAAAT
AATATTATTAGTTCACGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MKLSFISTLMASTLFLTNIVIAGEAIEQQQTVQGNPLVKVKVQRGSVTFKSWDKNEIAVKGTLDDLSEGFTFSVKGNNVT
IEDTLPRQYSGNNTEGSELVITLPRKLKLEAEGVSANYSLDNLQGALEVSSVSGNIKATTLSDKTMLQTVSGDILTRGLT
GKSQLQTVSGDIKDTQSTGTLSYQMVSGELTTDTQASKVSIESVSGDSTIALGSIDTLSVKTVSGDVELSLNSLQNRAKL
GSVSGDIEMRFLGDTDVSFNINGGPSGKINNKLTDDKVTKEKYSPQSYLKFQTGDGLAELNASTISGKIELLK

Sequences:

>Translated_313_residues
MKLSFISTLMASTLFLTNIVIAGEAIEQQQTVQGNPLVKVKVQRGSVTFKSWDKNEIAVKGTLDDLSEGFTFSVKGNNVT
IEDTLPRQYSGNNTEGSELVITLPRKLKLEAEGVSANYSLDNLQGALEVSSVSGNIKATTLSDKTMLQTVSGDILTRGLT
GKSQLQTVSGDIKDTQSTGTLSYQMVSGELTTDTQASKVSIESVSGDSTIALGSIDTLSVKTVSGDVELSLNSLQNRAKL
GSVSGDIEMRFLGDTDVSFNINGGPSGKINNKLTDDKVTKEKYSPQSYLKFQTGDGLAELNASTISGKIELLK
>Mature_313_residues
MKLSFISTLMASTLFLTNIVIAGEAIEQQQTVQGNPLVKVKVQRGSVTFKSWDKNEIAVKGTLDDLSEGFTFSVKGNNVT
IEDTLPRQYSGNNTEGSELVITLPRKLKLEAEGVSANYSLDNLQGALEVSSVSGNIKATTLSDKTMLQTVSGDILTRGLT
GKSQLQTVSGDIKDTQSTGTLSYQMVSGELTTDTQASKVSIESVSGDSTIALGSIDTLSVKTVSGDVELSLNSLQNRAKL
GSVSGDIEMRFLGDTDVSFNINGGPSGKINNKLTDDKVTKEKYSPQSYLKFQTGDGLAELNASTISGKIELLK

Specific function: Unknown

COG id: COG3595

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33311; Mature: 33311

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSFISTLMASTLFLTNIVIAGEAIEQQQTVQGNPLVKVKVQRGSVTFKSWDKNEIAVK
CCHHHHHHHHHHHHHHHHHEEECCHHHHHHHCCCCCEEEEEEECCEEEEECCCCCCEEEE
GTLDDLSEGFTFSVKGNNVTIEDTLPRQYSGNNTEGSELVITLPRKLKLEAEGVSANYSL
ECHHHHHCCCEEEEECCEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCH
DNLQGALEVSSVSGNIKATTLSDKTMLQTVSGDILTRGLTGKSQLQTVSGDIKDTQSTGT
HHCCCEEEEEECCCCEEEEEECCHHHHHHHCCCCEEECCCCHHHHHEECCCCCCCCCCCE
LSYQMVSGELTTDTQASKVSIESVSGDSTIALGSIDTLSVKTVSGDVELSLNSLQNRAKL
EEEEEEECEECCCCCCCEEEEEECCCCCEEEEECCCEEEEEEECCCEEEEHHHHHHHHHC
GSVSGDIEMRFLGDTDVSFNINGGPSGKINNKLTDDKVTKEKYSPQSYLKFQTGDGLAEL
CCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCEEC
NASTISGKIELLK
CCEEECCEEEEEC
>Mature Secondary Structure
MKLSFISTLMASTLFLTNIVIAGEAIEQQQTVQGNPLVKVKVQRGSVTFKSWDKNEIAVK
CCHHHHHHHHHHHHHHHHHEEECCHHHHHHHCCCCCEEEEEEECCEEEEECCCCCCEEEE
GTLDDLSEGFTFSVKGNNVTIEDTLPRQYSGNNTEGSELVITLPRKLKLEAEGVSANYSL
ECHHHHHCCCEEEEECCEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCH
DNLQGALEVSSVSGNIKATTLSDKTMLQTVSGDILTRGLTGKSQLQTVSGDIKDTQSTGT
HHCCCEEEEEECCCCEEEEEECCHHHHHHHCCCCEEECCCCHHHHHEECCCCCCCCCCCE
LSYQMVSGELTTDTQASKVSIESVSGDSTIALGSIDTLSVKTVSGDVELSLNSLQNRAKL
EEEEEEECEECCCCCCCEEEEEECCCCCEEEEECCCEEEEEEECCCEEEEHHHHHHHHHC
GSVSGDIEMRFLGDTDVSFNINGGPSGKINNKLTDDKVTKEKYSPQSYLKFQTGDGLAEL
CCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCEEC
NASTISGKIELLK
CCEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA