Click here to switch to the map view.

The map label for this gene is yhbY [C]

Identifier: 157962887

GI number: 157962887

Start: 3764754

End: 3765053

Strand: Direct

Name: yhbY [C]

Synonym: Spea_3069

Alternate gene names: 157962887

Gene position: 3764754-3765053 (Clockwise)

Preceding gene: 157962874

Following gene: 157962899

Centisome position: 72.75

GC content: 41.33

Gene sequence:

>300_bases
ATGAACTTAACAACCAAACAAAAACAGCACTTAAAAGGCTTAGCGCACAGTCTCAAGCCTGTAGTGATGCTTGGTGGCAA
CGGCTTGACTGAGGGAGTGCTGGCTGAAATTGATAATGCACTTTCACATCATGAATTGATTAAAGTGAAAGTAGCCTCTG
GTGACAGAGAGCTTAAAAACGCTATCGTAGATGCCATTGTACGTGAAACTAAAGCTGAAAAAGTACAGCTTATCGGTCAC
GTTTTAGTACTGTTCCGTCAGTCTGAAGAAATGAAAATTGCTGTGCCTAAGGCAAAGTAA

Upstream 100 bases:

>100_bases
CTGACATTTAAAATCCGCAACAAAATTGAGAGTTACACAAAGCCTATATAAGGGTAGAATAGCGGGTTTTCAACAGTAAC
TCAGCATAAAGTTGGTATAA

Downstream 100 bases:

>100_bases
TTAACAAAGATCTCTTCATTCACATGAAAGATGCCTTTGTAAGATAAATAAAAAGAGCCGCTGTTTATACAGCGGCTCTT
TTTTTGTCTGCTTTATGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MNLTTKQKQHLKGLAHSLKPVVMLGGNGLTEGVLAEIDNALSHHELIKVKVASGDRELKNAIVDAIVRETKAEKVQLIGH
VLVLFRQSEEMKIAVPKAK

Sequences:

>Translated_99_residues
MNLTTKQKQHLKGLAHSLKPVVMLGGNGLTEGVLAEIDNALSHHELIKVKVASGDRELKNAIVDAIVRETKAEKVQLIGH
VLVLFRQSEEMKIAVPKAK
>Mature_99_residues
MNLTTKQKQHLKGLAHSLKPVVMLGGNGLTEGVLAEIDNALSHHELIKVKVASGDRELKNAIVDAIVRETKAEKVQLIGH
VLVLFRQSEEMKIAVPKAK

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=97, Percent_Identity=71.1340206185567, Blast_Score=140, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 10825; Mature: 10825

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS01301 UPF0044

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTTKQKQHLKGLAHSLKPVVMLGGNGLTEGVLAEIDNALSHHELIKVKVASGDRELKN
CCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHH
AIVDAIVRETKAEKVQLIGHVLVLFRQSEEMKIAVPKAK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCC
>Mature Secondary Structure
MNLTTKQKQHLKGLAHSLKPVVMLGGNGLTEGVLAEIDNALSHHELIKVKVASGDRELKN
CCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHH
AIVDAIVRETKAEKVQLIGHVLVLFRQSEEMKIAVPKAK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]