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The map label for this gene is yhbU [H]

Identifier: 157962837

GI number: 157962837

Start: 3700778

End: 3701779

Strand: Direct

Name: yhbU [H]

Synonym: Spea_3019

Alternate gene names: 157962837

Gene position: 3700778-3701779 (Clockwise)

Preceding gene: 157962835

Following gene: 157962838

Centisome position: 71.52

GC content: 48.5

Gene sequence:

>1002_bases
ATGGAATTACTGTGCCCCGCGGGAAATCTCGCATCCCTAAAAACCGCCCTTAATGCAGGTGCTGATGCGGTCTACCTCGG
TCTGAAGGACGATACCAATGCACGGTCGTTTGCAGGTTTAAATTTTACCCCTAAGAAACTTCAGCAAGCCGCCGAATATA
CAAAGAAGTGTGGCAAGAAGATATTTTTGACCATCAATACATTTCCTAAACCCGGTGAAGAAAGCCGCTGGTATCAAGCA
ATTGATCTTGCTGCAGATACAGGCGTTGACGCATTAATCATGGCGGACTTATCTTTACTCGATTACGCCCACAGTAAATA
CCCGCACCTGCCCTTACACCTTTCGGTACAAGCAAGCGCCACTAACTTAGGTGCACTTAAGCTTTATAAGGAAGAATTTA
ATATCGAGCGTGCCGTGCTGCCACGGGTTTTATCGATGAAGCAAGTGCGCGACTTGGCCAAGGTCACTCCAGTAGATTTA
GAAGTTTTTGCTTTCGGCAGCTTATGTATTATGGCTGAAGGCCGCTGCCACTTATCTTCTTATGTGACGGGGCAATCCCC
CAACACTGGCGGCTCCTGCTCTCCAGCAAAGCATGTTCGTTGGCAGGAAGTGGGAAGCGATCGTTTAACCCTACTAAATG
ATGTACTAATCGACAAGTCAGGCTTAGATGAGCAGATGGGTTACCCTGTGGTATGTAAAGGCCGTTACACCACGACTGAA
AATAATACGCCAAGCCATATTCTTGAGTCACCTACAAGCCTTAACACCCTAAGCTTGCTGCCTGAACTTGCCAAAGCCAA
CGTGGTGTCGCTAAAGATTGAAGGCCGTCAACGTAGTCCTGCCTATGTAGAGCAAGTCACCAAAGTATGGCGCGCTGCTA
TCGATAGCTACATGTCTGCCCCCGAGAAATACCAGACACAGCGGGAGTGGGATCTTGCACTAGCAAAAGTCTCCGAAGGG
CAAACTACCACACTTGGCGCATACGAGCGCAACTGGCAATAG

Upstream 100 bases:

>100_bases
GAATATTACCTAGATTTTATGATCACAAACCTGTTTTACATCAAAAATATGATCTTCATTCCCTTTTAAACTCCTGTTTC
AATATTTTTGGAGCATCCAT

Downstream 100 bases:

>100_bases
TCATAGGCTAAAAAGGACAAATAATGAAAATCTCACTTGGCCCATTGCAGTATTGCTGGGAAAAACAAAAAGTTAATACT
TTTTACGACCAAGTCGCCCA

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MELLCPAGNLASLKTALNAGADAVYLGLKDDTNARSFAGLNFTPKKLQQAAEYTKKCGKKIFLTINTFPKPGEESRWYQA
IDLAADTGVDALIMADLSLLDYAHSKYPHLPLHLSVQASATNLGALKLYKEEFNIERAVLPRVLSMKQVRDLAKVTPVDL
EVFAFGSLCIMAEGRCHLSSYVTGQSPNTGGSCSPAKHVRWQEVGSDRLTLLNDVLIDKSGLDEQMGYPVVCKGRYTTTE
NNTPSHILESPTSLNTLSLLPELAKANVVSLKIEGRQRSPAYVEQVTKVWRAAIDSYMSAPEKYQTQREWDLALAKVSEG
QTTTLGAYERNWQ

Sequences:

>Translated_333_residues
MELLCPAGNLASLKTALNAGADAVYLGLKDDTNARSFAGLNFTPKKLQQAAEYTKKCGKKIFLTINTFPKPGEESRWYQA
IDLAADTGVDALIMADLSLLDYAHSKYPHLPLHLSVQASATNLGALKLYKEEFNIERAVLPRVLSMKQVRDLAKVTPVDL
EVFAFGSLCIMAEGRCHLSSYVTGQSPNTGGSCSPAKHVRWQEVGSDRLTLLNDVLIDKSGLDEQMGYPVVCKGRYTTTE
NNTPSHILESPTSLNTLSLLPELAKANVVSLKIEGRQRSPAYVEQVTKVWRAAIDSYMSAPEKYQTQREWDLALAKVSEG
QTTTLGAYERNWQ
>Mature_333_residues
MELLCPAGNLASLKTALNAGADAVYLGLKDDTNARSFAGLNFTPKKLQQAAEYTKKCGKKIFLTINTFPKPGEESRWYQA
IDLAADTGVDALIMADLSLLDYAHSKYPHLPLHLSVQASATNLGALKLYKEEFNIERAVLPRVLSMKQVRDLAKVTPVDL
EVFAFGSLCIMAEGRCHLSSYVTGQSPNTGGSCSPAKHVRWQEVGSDRLTLLNDVLIDKSGLDEQMGYPVVCKGRYTTTE
NNTPSHILESPTSLNTLSLLPELAKANVVSLKIEGRQRSPAYVEQVTKVWRAAIDSYMSAPEKYQTQREWDLALAKVSEG
QTTTLGAYERNWQ

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1789548, Length=333, Percent_Identity=59.7597597597598, Blast_Score=415, Evalue=1e-117,
Organism=Escherichia coli, GI1788397, Length=322, Percent_Identity=31.3664596273292, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI87081910, Length=325, Percent_Identity=29.2307692307692, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 36660; Mature: 36660

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: PS00141 ASP_PROTEASE ; PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLCPAGNLASLKTALNAGADAVYLGLKDDTNARSFAGLNFTPKKLQQAAEYTKKCGKK
CCEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHCCCE
IFLTINTFPKPGEESRWYQAIDLAADTGVDALIMADLSLLDYAHSKYPHLPLHLSVQASA
EEEEEECCCCCCCCCCHHHHEEHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECC
TNLGALKLYKEEFNIERAVLPRVLSMKQVRDLAKVTPVDLEVFAFGSLCIMAEGRCHLSS
CCCCHHEEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCEEEHH
YVTGQSPNTGGSCSPAKHVRWQEVGSDRLTLLNDVLIDKSGLDEQMGYPVVCKGRYTTTE
EECCCCCCCCCCCCHHHCCCHHHCCCCHHHHHHHHHHCCCCCHHHCCCCEEECCEEECCC
NNTPSHILESPTSLNTLSLLPELAKANVVSLKIEGRQRSPAYVEQVTKVWRAAIDSYMSA
CCCCHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC
PEKYQTQREWDLALAKVSEGQTTTLGAYERNWQ
CHHHHHHHHHHHHHEEECCCCCEEECCCCCCCC
>Mature Secondary Structure
MELLCPAGNLASLKTALNAGADAVYLGLKDDTNARSFAGLNFTPKKLQQAAEYTKKCGKK
CCEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHCCCE
IFLTINTFPKPGEESRWYQAIDLAADTGVDALIMADLSLLDYAHSKYPHLPLHLSVQASA
EEEEEECCCCCCCCCCHHHHEEHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECC
TNLGALKLYKEEFNIERAVLPRVLSMKQVRDLAKVTPVDLEVFAFGSLCIMAEGRCHLSS
CCCCHHEEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCEEEHH
YVTGQSPNTGGSCSPAKHVRWQEVGSDRLTLLNDVLIDKSGLDEQMGYPVVCKGRYTTTE
EECCCCCCCCCCCCHHHCCCHHHCCCCHHHHHHHHHHCCCCCHHHCCCCEEECCEEECCC
NNTPSHILESPTSLNTLSLLPELAKANVVSLKIEGRQRSPAYVEQVTKVWRAAIDSYMSA
CCCCHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC
PEKYQTQREWDLALAKVSEGQTTTLGAYERNWQ
CHHHHHHHHHHHHHEEECCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]