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The map label for this gene is ybgC [C]

Identifier: 157962826

GI number: 157962826

Start: 3687751

End: 3688227

Strand: Direct

Name: ybgC [C]

Synonym: Spea_3008

Alternate gene names: 157962826

Gene position: 3687751-3688227 (Clockwise)

Preceding gene: 157962821

Following gene: 157962829

Centisome position: 71.27

GC content: 43.82

Gene sequence:

>477_bases
ATGTCGCAAACTCATACCATGCAAGCTAATACTTCTGATACCAAGTCCGTGCAATACAGTAAGACCTACAGTTTTCCCGT
GCAGATTTATTATGAAGATACTGATTTTTCAGGTGTGGTTTACCACCCAAACTTTCTAAAATACTTTGAACGCGCCCGTG
AACACGTCATTGGAGCAAACGACTTAGCCAGCTTATGGGATGAACATGACTTAGGCTTCGCGGTATATCGCAGCGACATG
CTATGTCACGACGGTGTGGAGTTTGCCGATATTATCGATATTAGAACCAAGTTCTATTTTGAGAGTAAGTACCGTACGGT
TTGGTTGCAGGAGATCTGGCGCCCTAATGGAAAAAAACCCGCCGTAACCGCGCAGGTTGAGATGATCTGCATGAATAAGA
AACGTCAACTGAGCCCTATGCCAGCGCAGTTAATTGCTCGCTTAGGTGAAGCTTTTTCTGAAGCTGTTATTTTTTAA

Upstream 100 bases:

>100_bases
TGAGGTAGCTTGGGTATATCAGTTAGTCGTTTACAGATTATTTACTGTGATAGACTGATAACCCAATACCCTACACTGAC
AAAAATAAAGCTAAATCACT

Downstream 100 bases:

>100_bases
GATCTTTTCCAATTAGGCTTTGATAAAAGCGTTACCAATACTGATGAAAAAGGTAAGTCTCAAATTGCTAGATTATCGAC
ATAACCGACTTACCTTTTCT

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: L-Pal System-Associated Acyl-CoA Thioesterase; 4-Hydroxybenzoyl-CoA Thioesterase; Thioesterase Family Protein; Thioesterase Superfamily; Thioesterase; Pol-Pal System-Associated Acyl-CoA Thioesterase

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSQTHTMQANTSDTKSVQYSKTYSFPVQIYYEDTDFSGVVYHPNFLKYFERAREHVIGANDLASLWDEHDLGFAVYRSDM
LCHDGVEFADIIDIRTKFYFESKYRTVWLQEIWRPNGKKPAVTAQVEMICMNKKRQLSPMPAQLIARLGEAFSEAVIF

Sequences:

>Translated_158_residues
MSQTHTMQANTSDTKSVQYSKTYSFPVQIYYEDTDFSGVVYHPNFLKYFERAREHVIGANDLASLWDEHDLGFAVYRSDM
LCHDGVEFADIIDIRTKFYFESKYRTVWLQEIWRPNGKKPAVTAQVEMICMNKKRQLSPMPAQLIARLGEAFSEAVIF
>Mature_157_residues
SQTHTMQANTSDTKSVQYSKTYSFPVQIYYEDTDFSGVVYHPNFLKYFERAREHVIGANDLASLWDEHDLGFAVYRSDML
CHDGVEFADIIDIRTKFYFESKYRTVWLQEIWRPNGKKPAVTAQVEMICMNKKRQLSPMPAQLIARLGEAFSEAVIF

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18410; Mature: 18279

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTHTMQANTSDTKSVQYSKTYSFPVQIYYEDTDFSGVVYHPNFLKYFERAREHVIGAN
CCCCCCEECCCCCCCCEEEEEEECCEEEEEEECCCCCEEEECCHHHHHHHHHHHHCCCCH
DLASLWDEHDLGFAVYRSDMLCHDGVEFADIIDIRTKFYFESKYRTVWLQEIWRPNGKKP
HHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHEEECCCHHEEEHHHHHCCCCCCC
AVTAQVEMICMNKKRQLSPMPAQLIARLGEAFSEAVIF
EEEHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQTHTMQANTSDTKSVQYSKTYSFPVQIYYEDTDFSGVVYHPNFLKYFERAREHVIGAN
CCCCCEECCCCCCCCEEEEEEECCEEEEEEECCCCCEEEECCHHHHHHHHHHHHCCCCH
DLASLWDEHDLGFAVYRSDMLCHDGVEFADIIDIRTKFYFESKYRTVWLQEIWRPNGKKP
HHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHEEECCCHHEEEHHHHHCCCCCCC
AVTAQVEMICMNKKRQLSPMPAQLIARLGEAFSEAVIF
EEEHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA