Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962781

Identifier: 157962781

GI number: 157962781

Start: 3627371

End: 3628447

Strand: Direct

Name: 157962781

Synonym: Spea_2963

Alternate gene names: NA

Gene position: 3627371-3628447 (Clockwise)

Preceding gene: 157962778

Following gene: 157962782

Centisome position: 70.1

GC content: 45.4

Gene sequence:

>1077_bases
ATGAAACAATTAAAATTAACCCCAATTACCATCGCTATCGCCACAGGCTTGATGCTATCGGGTTGCGGGTCAGACAGTGA
TTCTAATGAGCCAGAACAAGCTCTGTTCAGCCTTGGCGTTTCAGATAATCCTGCAGACGCTAACATAGTCAATGTGGCTT
TTAAGCAGGTTATTCTAAAGAACAGTGAGGGCGCGTTCTCATTCGATGTCTCAACTGGGGATGATGGTTTACAACATGTC
GACCTATTAAGCTTCCAGGGTCAAGATGTTGAAACATTAGTTAGCGGTCAATCTGTTCCCGTAGGTGAATACCAGATGTG
TATTTACATGGAAAATAACACCATCTCTAGCGATGAAAGCTCTTATGTATTAAGTGGTGCAACAGAAGATGAAAATGGTG
ACTTTGTTGGCGGTGACATTGAAGGCTTAGTCACTAACAGTAACGGCTCTTGTGGTGGTGTCGGGGCCGATGAAGATAAC
ACAGGTCGCCTCTTCTTTAATAAATCCTTTACAATCGCGGCTGGTAACAACAATTTTGTTGCCGAGTTTAACCTAGCTAA
AGGCCTGCAAGCTCCCCACGGCAATAAAGAATACTGGACACTAAAACCAACTTCCGTACAGCTGGTTAATGCCTCTGACG
TTGGTGCAATTAAAGGCCAGATAAGTCAAGCGACAATGGATAATTGTGAGGCTGCTGCAGGCGGTTCAGAGTTTAGCCCT
GCGGTTTACCTTTACCCAAGTGAAACAGCACTGGATCAGATGGCAGACTTTAGAACGGGTCCAAATGTCTTAACTCAGGT
AGCACCAATCACATCGGCGAGAGTTAACCCAATCCTTGATGGCAGCGATAATGTCACTGGCTATGAATACGAATTTGGTT
TTGTGGTCGCCGACACCTATAGCCTTGGTTACACCTGCCTAGCGCAAAATGATGATCCAGAAGAGTCTAACGTCCGTGAA
CCTGAAGATGGTAGCGCGCCGTTTTTTATCGACTCTGCTGAGCAAGACGTCACTGTTACTCTAGGTGAAACGACTACACG
TCATTTTCCTGAGTCATTTGAGCCTGTCACGCCTTAA

Upstream 100 bases:

>100_bases
CAGCATTAGGCTTGAAGCAGATTTATTTTATTCAAAACCTACACTGCTTATTAGGCAAGGACTATACTCAATTATCAGAA
AAAATTGCTTTGGAGCACAG

Downstream 100 bases:

>100_bases
CTCAATGTGACAGTTACAATCACTATAAAGGGGCTTAGCGCCCCTTTTCTGCCACTTATAGAACCGCCCCCTCCCGCTGT
AAGCTAACGCCGCCAACAAA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKQLKLTPITIAIATGLMLSGCGSDSDSNEPEQALFSLGVSDNPADANIVNVAFKQVILKNSEGAFSFDVSTGDDGLQHV
DLLSFQGQDVETLVSGQSVPVGEYQMCIYMENNTISSDESSYVLSGATEDENGDFVGGDIEGLVTNSNGSCGGVGADEDN
TGRLFFNKSFTIAAGNNNFVAEFNLAKGLQAPHGNKEYWTLKPTSVQLVNASDVGAIKGQISQATMDNCEAAAGGSEFSP
AVYLYPSETALDQMADFRTGPNVLTQVAPITSARVNPILDGSDNVTGYEYEFGFVVADTYSLGYTCLAQNDDPEESNVRE
PEDGSAPFFIDSAEQDVTVTLGETTTRHFPESFEPVTP

Sequences:

>Translated_358_residues
MKQLKLTPITIAIATGLMLSGCGSDSDSNEPEQALFSLGVSDNPADANIVNVAFKQVILKNSEGAFSFDVSTGDDGLQHV
DLLSFQGQDVETLVSGQSVPVGEYQMCIYMENNTISSDESSYVLSGATEDENGDFVGGDIEGLVTNSNGSCGGVGADEDN
TGRLFFNKSFTIAAGNNNFVAEFNLAKGLQAPHGNKEYWTLKPTSVQLVNASDVGAIKGQISQATMDNCEAAAGGSEFSP
AVYLYPSETALDQMADFRTGPNVLTQVAPITSARVNPILDGSDNVTGYEYEFGFVVADTYSLGYTCLAQNDDPEESNVRE
PEDGSAPFFIDSAEQDVTVTLGETTTRHFPESFEPVTP
>Mature_358_residues
MKQLKLTPITIAIATGLMLSGCGSDSDSNEPEQALFSLGVSDNPADANIVNVAFKQVILKNSEGAFSFDVSTGDDGLQHV
DLLSFQGQDVETLVSGQSVPVGEYQMCIYMENNTISSDESSYVLSGATEDENGDFVGGDIEGLVTNSNGSCGGVGADEDN
TGRLFFNKSFTIAAGNNNFVAEFNLAKGLQAPHGNKEYWTLKPTSVQLVNASDVGAIKGQISQATMDNCEAAAGGSEFSP
AVYLYPSETALDQMADFRTGPNVLTQVAPITSARVNPILDGSDNVTGYEYEFGFVVADTYSLGYTCLAQNDDPEESNVRE
PEDGSAPFFIDSAEQDVTVTLGETTTRHFPESFEPVTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37977; Mature: 37977

Theoretical pI: Translated: 3.68; Mature: 3.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLKLTPITIAIATGLMLSGCGSDSDSNEPEQALFSLGVSDNPADANIVNVAFKQVILK
CCCEEECEEEEEEECCCEEECCCCCCCCCCHHHHHEECCCCCCCCCCHHHHHHHHHHHEE
NSEGAFSFDVSTGDDGLQHVDLLSFQGQDVETLVSGQSVPVGEYQMCIYMENNTISSDES
CCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCCC
SYVLSGATEDENGDFVGGDIEGLVTNSNGSCGGVGADEDNTGRLFFNKSFTIAAGNNNFV
CEEEECCCCCCCCCEECCCEEEEEECCCCCCCCCCCCCCCCCEEEEECEEEEEECCCCEE
AEFNLAKGLQAPHGNKEYWTLKPTSVQLVNASDVGAIKGQISQATMDNCEAAAGGSEFSP
EEEEHHCCCCCCCCCCCEEEECCCEEEEECCCCCCHHHCCHHHHHHHCCHHCCCCCCCCC
AVYLYPSETALDQMADFRTGPNVLTQVAPITSARVNPILDGSDNVTGYEYEFGFVVADTY
EEEEECCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEECCCCCCCEEEEEEEEEEEEEC
SLGYTCLAQNDDPEESNVREPEDGSAPFFIDSAEQDVTVTLGETTTRHFPESFEPVTP
CCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCHHCCCCCCCCCCC
>Mature Secondary Structure
MKQLKLTPITIAIATGLMLSGCGSDSDSNEPEQALFSLGVSDNPADANIVNVAFKQVILK
CCCEEECEEEEEEECCCEEECCCCCCCCCCHHHHHEECCCCCCCCCCHHHHHHHHHHHEE
NSEGAFSFDVSTGDDGLQHVDLLSFQGQDVETLVSGQSVPVGEYQMCIYMENNTISSDES
CCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCCC
SYVLSGATEDENGDFVGGDIEGLVTNSNGSCGGVGADEDNTGRLFFNKSFTIAAGNNNFV
CEEEECCCCCCCCCEECCCEEEEEECCCCCCCCCCCCCCCCCEEEEECEEEEEECCCCEE
AEFNLAKGLQAPHGNKEYWTLKPTSVQLVNASDVGAIKGQISQATMDNCEAAAGGSEFSP
EEEEHHCCCCCCCCCCCEEEECCCEEEEECCCCCCHHHCCHHHHHHHCCHHCCCCCCCCC
AVYLYPSETALDQMADFRTGPNVLTQVAPITSARVNPILDGSDNVTGYEYEFGFVVADTY
EEEEECCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEECCCCCCCEEEEEEEEEEEEEC
SLGYTCLAQNDDPEESNVREPEDGSAPFFIDSAEQDVTVTLGETTTRHFPESFEPVTP
CCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA