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The map label for this gene is yraR [H]

Identifier: 157962762

GI number: 157962762

Start: 3604973

End: 3605695

Strand: Direct

Name: yraR [H]

Synonym: Spea_2944

Alternate gene names: 157962762

Gene position: 3604973-3605695 (Clockwise)

Preceding gene: 157962761

Following gene: 157962763

Centisome position: 69.67

GC content: 47.58

Gene sequence:

>723_bases
ATGAACGCTGCGATCATAGGTGCCACAGGACTTATCGGACAACTTCTGCTACAGAAGTTAATCGACTCGGGTCAATATGA
AAATATTCTTCTGCTGGGTAGAAGTCAGCCGCACTACCGTAATGAGCATAGCGCAAACGTCTGTTTCATCTCGTGCCAGC
TAAGTGAGCTCCCCACTCTAGAGTTACCCTTTAGCATCGATCACGCCTTTTGTTGCCTAGGCACTACGATTAAAAAAGCC
GGTAGCCAAGTCGCATTTATCGCTGTAGATAAAGTTGCCTGTATCGATTTTATTGCCAAGTGCCAGGCCACGAATAACTA
TGTGGTTACGGCGCTCGGGGCCAACAGTCAATCAAAGACCTTCTATAATCGCGTCAAGGGTGAAACTCAAGAGGCGCTTG
CTGAACTGCTAAACCAAAGCCAAACGCCAACATCGGCTAAACGCTTGTGGCTGTTTCAACCAAGCTTACTATTGGGTAAG
CGTAGCGAAGCTCGATTGCTTGAAGATATTGGTAAACAGCTATTTAGACTTATCTCGCCTATGTTTATCGGCCCACTCAA
GCAGTATCGACCTATCGAGGCCGAGAAAGTCGCCAGCGCCATGCTAGCTCATGCCCTGTCTGTACAAGCTAAGTCAGTAC
AAGCCTTGCCTACACAAGACAGGTCTACACAAGTGACGTCAACTCAGCTTGTCACCCTAGTTTCTAATCGCGAGATGCTC
TAA

Upstream 100 bases:

>100_bases
TAGGCTTTTTTTGTTTGCCCTGCCCCATAAGTAAATAGTATTTGCTTCCCAGTACACACTCTCTAAACTGACACTATTAA
CCCTCTTAGCTAAGACTGAA

Downstream 100 bases:

>100_bases
CTCACACTCCTGCGCATCCAATACTCTGGGACTAGAGCTGGCGGCTATTGACTCACCACCTATGAGATCATTTAAAATAG
CCGCCCTTAATAGATGTTAC

Product: nucleoside-diphosphate-sugar epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MNAAIIGATGLIGQLLLQKLIDSGQYENILLLGRSQPHYRNEHSANVCFISCQLSELPTLELPFSIDHAFCCLGTTIKKA
GSQVAFIAVDKVACIDFIAKCQATNNYVVTALGANSQSKTFYNRVKGETQEALAELLNQSQTPTSAKRLWLFQPSLLLGK
RSEARLLEDIGKQLFRLISPMFIGPLKQYRPIEAEKVASAMLAHALSVQAKSVQALPTQDRSTQVTSTQLVTLVSNREML

Sequences:

>Translated_240_residues
MNAAIIGATGLIGQLLLQKLIDSGQYENILLLGRSQPHYRNEHSANVCFISCQLSELPTLELPFSIDHAFCCLGTTIKKA
GSQVAFIAVDKVACIDFIAKCQATNNYVVTALGANSQSKTFYNRVKGETQEALAELLNQSQTPTSAKRLWLFQPSLLLGK
RSEARLLEDIGKQLFRLISPMFIGPLKQYRPIEAEKVASAMLAHALSVQAKSVQALPTQDRSTQVTSTQLVTLVSNREML
>Mature_240_residues
MNAAIIGATGLIGQLLLQKLIDSGQYENILLLGRSQPHYRNEHSANVCFISCQLSELPTLELPFSIDHAFCCLGTTIKKA
GSQVAFIAVDKVACIDFIAKCQATNNYVVTALGANSQSKTFYNRVKGETQEALAELLNQSQTPTSAKRLWLFQPSLLLGK
RSEARLLEDIGKQLFRLISPMFIGPLKQYRPIEAEKVASAMLAHALSVQAKSVQALPTQDRSTQVTSTQLVTLVSNREML

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YER004W [H]

Homologues:

Organism=Homo sapiens, GI148728172, Length=181, Percent_Identity=29.8342541436464, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI148728168, Length=181, Percent_Identity=29.8342541436464, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI148728164, Length=181, Percent_Identity=29.8342541436464, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI148728166, Length=181, Percent_Identity=29.8342541436464, Blast_Score=74, Evalue=8e-14,
Organism=Escherichia coli, GI87082218, Length=223, Percent_Identity=34.0807174887892, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: NA

Molecular weight: Translated: 26324; Mature: 26324

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAAIIGATGLIGQLLLQKLIDSGQYENILLLGRSQPHYRNEHSANVCFISCQLSELPTL
CCCEEECHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCE
ELPFSIDHAFCCLGTTIKKAGSQVAFIAVDKVACIDFIAKCQATNNYVVTALGANSQSKT
ECCCCCCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCHHH
FYNRVKGETQEALAELLNQSQTPTSAKRLWLFQPSLLLGKRSEARLLEDIGKQLFRLISP
HHHHHCCCHHHHHHHHHCCCCCCCHHHEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHH
MFIGPLKQYRPIEAEKVASAMLAHALSVQAKSVQALPTQDRSTQVTSTQLVTLVSNREML
HHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHEEEEECCCCCC
>Mature Secondary Structure
MNAAIIGATGLIGQLLLQKLIDSGQYENILLLGRSQPHYRNEHSANVCFISCQLSELPTL
CCCEEECHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCE
ELPFSIDHAFCCLGTTIKKAGSQVAFIAVDKVACIDFIAKCQATNNYVVTALGANSQSKT
ECCCCCCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCHHH
FYNRVKGETQEALAELLNQSQTPTSAKRLWLFQPSLLLGKRSEARLLEDIGKQLFRLISP
HHHHHCCCHHHHHHHHHCCCCCCCHHHEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHH
MFIGPLKQYRPIEAEKVASAMLAHALSVQAKSVQALPTQDRSTQVTSTQLVTLVSNREML
HHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]