| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is queF [H]
Identifier: 157962721
GI number: 157962721
Start: 3538038
End: 3538910
Strand: Direct
Name: queF [H]
Synonym: Spea_2902
Alternate gene names: 157962721
Gene position: 3538038-3538910 (Clockwise)
Preceding gene: 157962719
Following gene: 157962723
Centisome position: 68.37
GC content: 44.44
Gene sequence:
>873_bases ATGGAAACCGTATTGATGACACAACATCATGATCCCTATAGTAACGCCCCCGAACTTTCTGAATTAACATTAGGAAAGTC GACAGGTTATCAAGAGCAGTATGATGCATCTTTACTTCAAGGCGTGCCGCGTAAGTTAAACCGTGATGCAATAGGCCTCA CTCAAGAGTTGCCATTTCATGGCTGTGATATCTGGACAGGCTACGAGCTCTCTTGGTTAAACGCTAAAGGCAAACCTATG GTTGCCATCGCCGAGTTCAGCCTAAGTTTTGACAGTAAAAACCTTATTGAGTCTAAGTCATTCAAGCTGTATTTAAACAG CTACAATCAGACACGATTCGAAAACGCACAAGCGGTACAGGAACGACTAGTCCAAGACTTAAGTGCCTGTGCTATGGGTG ATGTTACCGTTAAGGTTATCGAGCCTAAACAGTTCAGCCACCAGCGCATTGTTGAGCTACCGGGTACTTGCATCGACGAT CTTGATATTGAGGTTGATGACTATAGCTTCAACCCTGACTACTTAGTTGAAAGCGTCGATAATAAAGCGATTGTTGCAGA AACGCTGACATCTAACCTGCTTAAATCAAACTGCTTGATCACCTCGCAACCTGACTGGGGCACTGTGATGATCCGCTATC AAGGGCCAAAGATTGATCGTGAGAAGTTGCTGAGATACCTCATCTCATTCAGACAACATAACGAGTTTCACGAGCAATGT GTTGAGCGTATTTTTGTTGATCTCAAACGCTTCTGCCAATGTGCCAAGCTGACGGTTTATGCCCGTTATACTCGCCGTGG TGGTTTAGATATCAATCCATATCGTAGCGATTTTGAACACCCGGCTGAAAATCAACGTCTCGCCAGACAATAA
Upstream 100 bases:
>100_bases AACGTAGGCTTGTTGATATTTAGATAAAAAAAGATCTAAAGCGGGTAAAGAAGACACTGAAGACAGTTCCAAATCAGTTA TAATAGGGGTCTATTTTGAC
Downstream 100 bases:
>100_bases TCGAACTCCAAGCAAAGACCTGTAACGCCCTGCATTACAGGTCTTTTTTATTAAGTTCAAAGCTAAAACTAAGCCTGTGT TCGCCGTGTTATCGCTTGAT
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues METVLMTQHHDPYSNAPELSELTLGKSTGYQEQYDASLLQGVPRKLNRDAIGLTQELPFHGCDIWTGYELSWLNAKGKPM VAIAEFSLSFDSKNLIESKSFKLYLNSYNQTRFENAQAVQERLVQDLSACAMGDVTVKVIEPKQFSHQRIVELPGTCIDD LDIEVDDYSFNPDYLVESVDNKAIVAETLTSNLLKSNCLITSQPDWGTVMIRYQGPKIDREKLLRYLISFRQHNEFHEQC VERIFVDLKRFCQCAKLTVYARYTRRGGLDINPYRSDFEHPAENQRLARQ
Sequences:
>Translated_290_residues METVLMTQHHDPYSNAPELSELTLGKSTGYQEQYDASLLQGVPRKLNRDAIGLTQELPFHGCDIWTGYELSWLNAKGKPM VAIAEFSLSFDSKNLIESKSFKLYLNSYNQTRFENAQAVQERLVQDLSACAMGDVTVKVIEPKQFSHQRIVELPGTCIDD LDIEVDDYSFNPDYLVESVDNKAIVAETLTSNLLKSNCLITSQPDWGTVMIRYQGPKIDREKLLRYLISFRQHNEFHEQC VERIFVDLKRFCQCAKLTVYARYTRRGGLDINPYRSDFEHPAENQRLARQ >Mature_290_residues METVLMTQHHDPYSNAPELSELTLGKSTGYQEQYDASLLQGVPRKLNRDAIGLTQELPFHGCDIWTGYELSWLNAKGKPM VAIAEFSLSFDSKNLIESKSFKLYLNSYNQTRFENAQAVQERLVQDLSACAMGDVTVKVIEPKQFSHQRIVELPGTCIDD LDIEVDDYSFNPDYLVESVDNKAIVAETLTSNLLKSNCLITSQPDWGTVMIRYQGPKIDREKLLRYLISFRQHNEFHEQC VERIFVDLKRFCQCAKLTVYARYTRRGGLDINPYRSDFEHPAENQRLARQ
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) [H]
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789158, Length=279, Percent_Identity=62.3655913978495, Blast_Score=355, Evalue=1e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016428 - InterPro: IPR020602 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =1.7.1.13 [H]
Molecular weight: Translated: 33375; Mature: 33375
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METVLMTQHHDPYSNAPELSELTLGKSTGYQEQYDASLLQGVPRKLNRDAIGLTQELPFH CCCEEEECCCCCCCCCCCHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GCDIWTGYELSWLNAKGKPMVAIAEFSLSFDSKNLIESKSFKLYLNSYNQTRFENAQAVQ CCCEECCCEEEEECCCCCCEEEEEEEEECCCCCHHHCCCCEEEEEECCCCHHHHHHHHHH ERLVQDLSACAMGDVTVKVIEPKQFSHQRIVELPGTCIDDLDIEVDDYSFNPDYLVESVD HHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCEEECCCCCCHHHHHHCCC NKAIVAETLTSNLLKSNCLITSQPDWGTVMIRYQGPKIDREKLLRYLISFRQHNEFHEQC CCEEHHHHHHHHHHHCCCEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHH VERIFVDLKRFCQCAKLTVYARYTRRGGLDINPYRSDFEHPAENQRLARQ HHHHHHHHHHHHHHHHHHEEEEEHHCCCCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure METVLMTQHHDPYSNAPELSELTLGKSTGYQEQYDASLLQGVPRKLNRDAIGLTQELPFH CCCEEEECCCCCCCCCCCHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GCDIWTGYELSWLNAKGKPMVAIAEFSLSFDSKNLIESKSFKLYLNSYNQTRFENAQAVQ CCCEECCCEEEEECCCCCCEEEEEEEEECCCCCHHHCCCCEEEEEECCCCHHHHHHHHHH ERLVQDLSACAMGDVTVKVIEPKQFSHQRIVELPGTCIDDLDIEVDDYSFNPDYLVESVD HHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCEEECCCCCCHHHHHHCCC NKAIVAETLTSNLLKSNCLITSQPDWGTVMIRYQGPKIDREKLLRYLISFRQHNEFHEQC CCEEHHHHHHHHHHHCCCEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHH VERIFVDLKRFCQCAKLTVYARYTRRGGLDINPYRSDFEHPAENQRLARQ HHHHHHHHHHHHHHHHHHEEEEEHHCCCCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]