| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962582
Identifier: 157962582
GI number: 157962582
Start: 3374543
End: 3374851
Strand: Direct
Name: 157962582
Synonym: Spea_2761
Alternate gene names: NA
Gene position: 3374543-3374851 (Clockwise)
Preceding gene: 157962581
Following gene: 157962583
Centisome position: 65.21
GC content: 44.34
Gene sequence:
>309_bases ATGCTGAGCTGCAGCCAACATGATTACATAGAGCTGGTGTGTATTTTTAATTACCCTATCAAACTCACTATGAAAAATGG TGACTCGATTAGCGGTAAGGCGCTGGATACATGCAGAAATACACAAAAACAGCACTGCATAAAACTTGTCTGCAAACAAC AGAACTGTATAAAAGGGAGCCACAGCCAAAGCAGCCCTGAAACTCAGCTCTCGGATGAAGCCGAGCACCGACTAATCGTA CTCGATGATATAGCCAGTATGCAGGTCTGTGTCGATAACCCCCACCTAGATCGCATAGAACTTGGTTAA
Upstream 100 bases:
>100_bases GCAGGCCTTTTTTATTAAATTTATATTCTAATTTGGGGCTAATCCGCTACCCTTATAATTACCCACTTCATCAAATACCA ATCTGCATAAGGTCACAAAT
Downstream 100 bases:
>100_bases CCTCCAATATATAAAACTTTTGCCTTTCCCTAAATTCCCTGCTGCTCTATGCTGTTAGCAAATAAAACTAATTAATTTGG TTAGTTAGCTGACTAACTTG
Product: transcriptional antiterminator, Rof
Products: NA
Alternate protein names: Modulator Of Rho-Dependent Transcription Termination
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MLSCSQHDYIELVCIFNYPIKLTMKNGDSISGKALDTCRNTQKQHCIKLVCKQQNCIKGSHSQSSPETQLSDEAEHRLIV LDDIASMQVCVDNPHLDRIELG
Sequences:
>Translated_102_residues MLSCSQHDYIELVCIFNYPIKLTMKNGDSISGKALDTCRNTQKQHCIKLVCKQQNCIKGSHSQSSPETQLSDEAEHRLIV LDDIASMQVCVDNPHLDRIELG >Mature_102_residues MLSCSQHDYIELVCIFNYPIKLTMKNGDSISGKALDTCRNTQKQHCIKLVCKQQNCIKGSHSQSSPETQLSDEAEHRLIV LDDIASMQVCVDNPHLDRIELG
Specific function: Unknown
COG id: COG4568
COG function: function code K; Transcriptional antiterminator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11474; Mature: 11474
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 6.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSCSQHDYIELVCIFNYPIKLTMKNGDSISGKALDTCRNTQKQHCIKLVCKQQNCIKGS CCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCC HSQSSPETQLSDEAEHRLIVLDDIASMQVCVDNPHLDRIELG CCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEECC >Mature Secondary Structure MLSCSQHDYIELVCIFNYPIKLTMKNGDSISGKALDTCRNTQKQHCIKLVCKQQNCIKGS CCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCC HSQSSPETQLSDEAEHRLIVLDDIASMQVCVDNPHLDRIELG CCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA