Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is feoB [H]
Identifier: 157962511
GI number: 157962511
Start: 3278172
End: 3280466
Strand: Reverse
Name: feoB [H]
Synonym: Spea_2690
Alternate gene names: 157962511
Gene position: 3280466-3278172 (Counterclockwise)
Preceding gene: 157962512
Following gene: 157962510
Centisome position: 63.4
GC content: 45.14
Gene sequence:
>2295_bases ATGGCTAAACAATTTAACTGTGTCACAGTCGGTAACCCAAACGCGGGTAAATCTACACTATTCAATGCACTTACCGGTTC TAACCAGCAAGTAGGTAACTGGTCAGGTGTAACCGTTGAGAAAAAGACAGGACAATTTGCCCTACAGGGGACAGATGTTT TCTTAACCGATCTCCCTGGCATTTATGATCTACTTCCTGCGGGTAATAGCTGTGATTGTTCTTTAGATGAGCAAATTGCC CAGCAATATTTAGCGGACCAGCCTATCGACGGCATTATCAACTTGGTTGATGCGACGAACATTGAGCGCCATTTATACCT AACAGTGCAGCTACGTGAACTGGGTATTCCGTTAGTGGTTGTGCTGAACAAGATTGATGCGGCGCTAGAGCGTGGTATTA AGATTGACGTTGCTAAAATGAGCGAAGAGCTAGGTTGCCCTGTGGTAGCAGTCTGTTCTCGTGAAGAAAAAGACATTGAA AAGGTCAAGGAGCAATTTGTTGCTCTGCTTGATGGCAAAGTCTCTGAAGCGCCATTAGTACTTAATTACGACACTGAAAT CGAATCAGGTGTTACTAGCTTATTAGCTAAAGATGACTCATTAAGCCGCGGCCGCGCACTCGCTATGCTAGCTAATGGTT TAGGTTGTGGTAAATGTAAGAATAGCCAAATGATTGGTGAAGTTGAACAATACTCTCAAGCATTATCTAGCCAAGGCAAA GATATTGAGATAATGGTTGCAACGACACGTTTTGATTTTGTTGAGCGTGTATTCACTGGCTCAGTTGATAGCGATAATCG TGAAACCTTTACTGATAAGCTCGATAAAATTGTGCTGCATCCAGTCGCGGGCATTCCTGTTTTCCTATTTGTTATGTATT TAATGTTCATGTTCAGCATTAACGTGGGCAGTTCATTTATCGATTTCTTCGATATAACCGCTGGTGCATTGTTTGTTGAT CACCTAGGTGCATTCATGACAAGCCTAGGTTCGCCAACTTGGTTAGTCACCATTGTTGCTGGTGGCGTAGGTCAAGGAAT TCAAACTGTTGCGACCTTTATTCCTGTGATTGCTGCGTTATTCTTAGCTCTTTCGGTGCTCGAAGGTTCAGGCTACATGG CGCGTGCAGCGTTTGTGGTCGATGGTCTAATGCGCCGTATAGGCCTACCGGGCCGTGCCTTTGTACCTATGATTGTTGGT TTTGGTTGTTCAGTTCCTGCGATTATGGCAACACGTACTCTAGGCAGTGAGCGCGAACGTATCGTTACCGGTATGATGGC ACCGTTTATGTCATGTGGTGCTAGATTGCCTGTATATGCGCTGTTTGCTGCGGCTTTCTTCCCTGAATCTGGCCAAAACC TAGTATTCTTACTGTATATCATTGGTATCTTCGCCGCTATCGGTACAGGTCTGTTGTTACGCTCAACATTACTACCAGGC TCAAGCAGCGCTGTTGTTATGGAGTTGCCTAGCTACGAGAAGCCAAAGTTCAAGACGGTAATGGCGCGTACAGGTAAGCG TACCAAGAGCTTTATTATGGGTGCGGGTAAAACCATTGTTATTGTAGTGACCCTTCTAAACTTCGTTAATGCGATTGGTA TTGATGGTTCATTTGGTCACGAAGACAGCTCTGAATCTGTGCTAAGTGTTGCCAGTCAAAAGGTCACACCTTTGTTTTCG CCTATGGGTGTTGAGCAAGATAACTGGCCTGCAACTGTAGGTATTATCACAGGTATCTTCGCTAAAGAAGCGGTAGTGGG TACCTTAAATAGTCTTTACTCAGATGGTGGCGCCGGTGATGAAGAGCTAGCACCGTTTAGCGAAACATTGACTGAAGCGC TAGGGACGATTCCAGAAAACTTATTTGGTATTGCTCCTGATGATCCACTATCTATCTCTGTGGGGGATGTTTCATCAGTA GAAGCTGCATCGGAAGAGCTAGAAGTTGATACATCAACATTTGGTGCGCTGCAAGCTGGTTTTGCTGGCGTAACAGCAGC ATTTGCTTACCTATTGTTTGTTCTATTATACACACCATGTGTGGCGGCAATGGGAGCGCTAGTTAACGAGTTTGGTGGAC GCTGGGCAGCCTTTGCTGGTCTGTGGACATTCGCTCTAGCTTATGGCGTTGCTACTGTGTTCTACCAGGCGGCTACGTTT GCGCAGCACCCACTGCAATCAAGCCTTTGGATTGGCTTCTTCGCTATCGCTTTAGTCGTGTTCTATATTTGGCTGAAGCA GAAGGGTAAGAAAACCCAAACTATTATTCCAGGCATTAAAGTGATTACTGGATAA
Upstream 100 bases:
>100_bases CGCAGGGCACCGATGGGATCTGGTGTTGAGTTGGATATCCGTGGCAGTAAATTATGTATGCGTCGCGATTTAGCAGATAT TATTGAGGTTGAAAAAGCGA
Downstream 100 bases:
>100_bases CGCGAATAGCGTATAATGTTATCAGGTAATAAAAGCAGCGATGATTCGCTGCTTTTTGCTCTATAAATGCTTATGCGATA GACATAAGCGAGTGTTTTTA
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 764; Mature: 763
Protein sequence:
>764_residues MAKQFNCVTVGNPNAGKSTLFNALTGSNQQVGNWSGVTVEKKTGQFALQGTDVFLTDLPGIYDLLPAGNSCDCSLDEQIA QQYLADQPIDGIINLVDATNIERHLYLTVQLRELGIPLVVVLNKIDAALERGIKIDVAKMSEELGCPVVAVCSREEKDIE KVKEQFVALLDGKVSEAPLVLNYDTEIESGVTSLLAKDDSLSRGRALAMLANGLGCGKCKNSQMIGEVEQYSQALSSQGK DIEIMVATTRFDFVERVFTGSVDSDNRETFTDKLDKIVLHPVAGIPVFLFVMYLMFMFSINVGSSFIDFFDITAGALFVD HLGAFMTSLGSPTWLVTIVAGGVGQGIQTVATFIPVIAALFLALSVLEGSGYMARAAFVVDGLMRRIGLPGRAFVPMIVG FGCSVPAIMATRTLGSERERIVTGMMAPFMSCGARLPVYALFAAAFFPESGQNLVFLLYIIGIFAAIGTGLLLRSTLLPG SSSAVVMELPSYEKPKFKTVMARTGKRTKSFIMGAGKTIVIVVTLLNFVNAIGIDGSFGHEDSSESVLSVASQKVTPLFS PMGVEQDNWPATVGIITGIFAKEAVVGTLNSLYSDGGAGDEELAPFSETLTEALGTIPENLFGIAPDDPLSISVGDVSSV EAASEELEVDTSTFGALQAGFAGVTAAFAYLLFVLLYTPCVAAMGALVNEFGGRWAAFAGLWTFALAYGVATVFYQAATF AQHPLQSSLWIGFFAIALVVFYIWLKQKGKKTQTIIPGIKVITG
Sequences:
>Translated_764_residues MAKQFNCVTVGNPNAGKSTLFNALTGSNQQVGNWSGVTVEKKTGQFALQGTDVFLTDLPGIYDLLPAGNSCDCSLDEQIA QQYLADQPIDGIINLVDATNIERHLYLTVQLRELGIPLVVVLNKIDAALERGIKIDVAKMSEELGCPVVAVCSREEKDIE KVKEQFVALLDGKVSEAPLVLNYDTEIESGVTSLLAKDDSLSRGRALAMLANGLGCGKCKNSQMIGEVEQYSQALSSQGK DIEIMVATTRFDFVERVFTGSVDSDNRETFTDKLDKIVLHPVAGIPVFLFVMYLMFMFSINVGSSFIDFFDITAGALFVD HLGAFMTSLGSPTWLVTIVAGGVGQGIQTVATFIPVIAALFLALSVLEGSGYMARAAFVVDGLMRRIGLPGRAFVPMIVG FGCSVPAIMATRTLGSERERIVTGMMAPFMSCGARLPVYALFAAAFFPESGQNLVFLLYIIGIFAAIGTGLLLRSTLLPG SSSAVVMELPSYEKPKFKTVMARTGKRTKSFIMGAGKTIVIVVTLLNFVNAIGIDGSFGHEDSSESVLSVASQKVTPLFS PMGVEQDNWPATVGIITGIFAKEAVVGTLNSLYSDGGAGDEELAPFSETLTEALGTIPENLFGIAPDDPLSISVGDVSSV EAASEELEVDTSTFGALQAGFAGVTAAFAYLLFVLLYTPCVAAMGALVNEFGGRWAAFAGLWTFALAYGVATVFYQAATF AQHPLQSSLWIGFFAIALVVFYIWLKQKGKKTQTIIPGIKVITG >Mature_763_residues AKQFNCVTVGNPNAGKSTLFNALTGSNQQVGNWSGVTVEKKTGQFALQGTDVFLTDLPGIYDLLPAGNSCDCSLDEQIAQ QYLADQPIDGIINLVDATNIERHLYLTVQLRELGIPLVVVLNKIDAALERGIKIDVAKMSEELGCPVVAVCSREEKDIEK VKEQFVALLDGKVSEAPLVLNYDTEIESGVTSLLAKDDSLSRGRALAMLANGLGCGKCKNSQMIGEVEQYSQALSSQGKD IEIMVATTRFDFVERVFTGSVDSDNRETFTDKLDKIVLHPVAGIPVFLFVMYLMFMFSINVGSSFIDFFDITAGALFVDH LGAFMTSLGSPTWLVTIVAGGVGQGIQTVATFIPVIAALFLALSVLEGSGYMARAAFVVDGLMRRIGLPGRAFVPMIVGF GCSVPAIMATRTLGSERERIVTGMMAPFMSCGARLPVYALFAAAFFPESGQNLVFLLYIIGIFAAIGTGLLLRSTLLPGS SSAVVMELPSYEKPKFKTVMARTGKRTKSFIMGAGKTIVIVVTLLNFVNAIGIDGSFGHEDSSESVLSVASQKVTPLFSP MGVEQDNWPATVGIITGIFAKEAVVGTLNSLYSDGGAGDEELAPFSETLTEALGTIPENLFGIAPDDPLSISVGDVSSVE AASEELEVDTSTFGALQAGFAGVTAAFAYLLFVLLYTPCVAAMGALVNEFGGRWAAFAGLWTFALAYGVATVFYQAATFA QHPLQSSLWIGFFAIALVVFYIWLKQKGKKTQTIIPGIKVITG
Specific function: Fe(2+) uptake system, probably driven by GTP [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoB (TC 9.A.8) family [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=752, Percent_Identity=42.686170212766, Blast_Score=537, Evalue=1e-154,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 81445; Mature: 81314
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKQFNCVTVGNPNAGKSTLFNALTGSNQQVGNWSGVTVEKKTGQFALQGTDVFLTDLPG CCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEECCCEEEECCCC IYDLLPAGNSCDCSLDEQIAQQYLADQPIDGIINLVDATNIERHLYLTVQLRELGIPLVV HHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEHHHCCCCHHH VLNKIDAALERGIKIDVAKMSEELGCPVVAVCSREEKDIEKVKEQFVALLDGKVSEAPLV HHHHHHHHHHCCCEEEHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEE LNYDTEIESGVTSLLAKDDSLSRGRALAMLANGLGCGKCKNSQMIGEVEQYSQALSSQGK EEECCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC DIEIMVATTRFDFVERVFTGSVDSDNRETFTDKLDKIVLHPVAGIPVFLFVMYLMFMFSI CEEEEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH NVGSSFIDFFDITAGALFVDHLGAFMTSLGSPTWLVTIVAGGVGQGIQTVATFIPVIAAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHH FLALSVLEGSGYMARAAFVVDGLMRRIGLPGRAFVPMIVGFGCSVPAIMATRTLGSERER HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHH IVTGMMAPFMSCGARLPVYALFAAAFFPESGQNLVFLLYIIGIFAAIGTGLLLRSTLLPG HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC SSSAVVMELPSYEKPKFKTVMARTGKRTKSFIMGAGKTIVIVVTLLNFVNAIGIDGSFGH CCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC EDSSESVLSVASQKVTPLFSPMGVEQDNWPATVGIITGIFAKEAVVGTLNSLYSDGGAGD CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC EELAPFSETLTEALGTIPENLFGIAPDDPLSISVGDVSSVEAASEELEVDTSTFGALQAG CCCCCHHHHHHHHHHCCCHHHCCCCCCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHH FAGVTAAFAYLLFVLLYTPCVAAMGALVNEFGGRWAAFAGLWTFALAYGVATVFYQAATF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AQHPLQSSLWIGFFAIALVVFYIWLKQKGKKTQTIIPGIKVITG HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEECC >Mature Secondary Structure AKQFNCVTVGNPNAGKSTLFNALTGSNQQVGNWSGVTVEKKTGQFALQGTDVFLTDLPG CCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEECCCEEEECCCC IYDLLPAGNSCDCSLDEQIAQQYLADQPIDGIINLVDATNIERHLYLTVQLRELGIPLVV HHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEHHHCCCCHHH VLNKIDAALERGIKIDVAKMSEELGCPVVAVCSREEKDIEKVKEQFVALLDGKVSEAPLV HHHHHHHHHHCCCEEEHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEE LNYDTEIESGVTSLLAKDDSLSRGRALAMLANGLGCGKCKNSQMIGEVEQYSQALSSQGK EEECCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC DIEIMVATTRFDFVERVFTGSVDSDNRETFTDKLDKIVLHPVAGIPVFLFVMYLMFMFSI CEEEEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH NVGSSFIDFFDITAGALFVDHLGAFMTSLGSPTWLVTIVAGGVGQGIQTVATFIPVIAAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHH FLALSVLEGSGYMARAAFVVDGLMRRIGLPGRAFVPMIVGFGCSVPAIMATRTLGSERER HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHH IVTGMMAPFMSCGARLPVYALFAAAFFPESGQNLVFLLYIIGIFAAIGTGLLLRSTLLPG HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC SSSAVVMELPSYEKPKFKTVMARTGKRTKSFIMGAGKTIVIVVTLLNFVNAIGIDGSFGH CCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC EDSSESVLSVASQKVTPLFSPMGVEQDNWPATVGIITGIFAKEAVVGTLNSLYSDGGAGD CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC EELAPFSETLTEALGTIPENLFGIAPDDPLSISVGDVSSVEAASEELEVDTSTFGALQAG CCCCCHHHHHHHHHHCCCHHHCCCCCCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHH FAGVTAAFAYLLFVLLYTPCVAAMGALVNEFGGRWAAFAGLWTFALAYGVATVFYQAATF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AQHPLQSSLWIGFFAIALVVFYIWLKQKGKKTQTIIPGIKVITG HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA