Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is folD [H]
Identifier: 157962504
GI number: 157962504
Start: 3270626
End: 3271480
Strand: Direct
Name: folD [H]
Synonym: Spea_2683
Alternate gene names: 157962504
Gene position: 3270626-3271480 (Clockwise)
Preceding gene: 157962497
Following gene: 157962506
Centisome position: 63.21
GC content: 45.85
Gene sequence:
>855_bases ATGACAGCCCAAAACATCGATGGTAAAGCTATTGCTCAATCCATTCGAACGCAACTCAAAGATAAAGTCACTGCCCGCAA AGAGGCAGGAAAAAGAGTCCCTGGTTTAGCCGTAATTCTTGTTGGAGCCGATCCAGCTTCACAAGTTTATGTCGGTAGCA AACGTAAGGCCTGTGAAGAAGTCGGTTTTATCTCTCGCTCTTATGATTTAGACAGCAGCACTTCTGAAGACGCACTCTTA TCATTAATTGATGAATGTAACGAAGACCCCACGATTGATGGCATCTTGGTACAATTACCGCTTCCTGAACATATTGAAGA ATCGAAAGTCATTGAGCGTATTCGTCCAGATAAAGATGTAGACGGTTTCCATCCTTATAATGTCGGTCGCTTAGCCCAGC GCATTCCGGTGTTGCGTTCGTGTACACCTATGGGGATCATGACACTGCTAAAATCGACTGGTGTCGATACCTTTGGCTTA GATGCCGTTGTTGTCGGCGCATCTAATATTGTCGGCCGCCCAATGTCGCTAGAGCTATTATTAGCAGGCTGTACAACCAC AACGTGTCACCGCTTTACTCGAAATCTAGAAGATAAAGTTAGAAGTGCAGATTTAGTCGTTGTTGCAGTTGGTAAGCCGG GCTTTATTCCTGGTGATTGGATTAAACCTGGCGCAATCGTTATCGATGTGGGTATCAACCGCTTAGAGAGTGGTCAGCTT GTAGGTGATGTCGAATTTGATGTTGCTTCTCAGCACGCGAGTTTCATTACACCTGTTCCTGGTGGCGTCGGCCCAATGAC TATCGCAAGCCTGTTAGAAAACACGCTATATGCCTGCGAGCAGTATCACGACTAA
Upstream 100 bases:
>100_bases GAATTGTTTGTTAACAGTCTAAATCAATGACACCTTTAGCCTGTCCTGTTAAAATGTCGCCGTTTTCCATTATCGCGCCG TATAAAGGACACCACCCCCA
Downstream 100 bases:
>100_bases TAGAAGGTTCTAGGTTCTAGGTTCTAGGTTCTAGGTTCTAGCAAAATATTTCAGACCTAGTTACTAAAAGAGATACCAGA CCTTTCCATCCATGGGGTGT
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTAQNIDGKAIAQSIRTQLKDKVTARKEAGKRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLDSSTSEDALL SLIDECNEDPTIDGILVQLPLPEHIEESKVIERIRPDKDVDGFHPYNVGRLAQRIPVLRSCTPMGIMTLLKSTGVDTFGL DAVVVGASNIVGRPMSLELLLAGCTTTTCHRFTRNLEDKVRSADLVVVAVGKPGFIPGDWIKPGAIVIDVGINRLESGQL VGDVEFDVASQHASFITPVPGGVGPMTIASLLENTLYACEQYHD
Sequences:
>Translated_284_residues MTAQNIDGKAIAQSIRTQLKDKVTARKEAGKRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLDSSTSEDALL SLIDECNEDPTIDGILVQLPLPEHIEESKVIERIRPDKDVDGFHPYNVGRLAQRIPVLRSCTPMGIMTLLKSTGVDTFGL DAVVVGASNIVGRPMSLELLLAGCTTTTCHRFTRNLEDKVRSADLVVVAVGKPGFIPGDWIKPGAIVIDVGINRLESGQL VGDVEFDVASQHASFITPVPGGVGPMTIASLLENTLYACEQYHD >Mature_283_residues TAQNIDGKAIAQSIRTQLKDKVTARKEAGKRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLDSSTSEDALLS LIDECNEDPTIDGILVQLPLPEHIEESKVIERIRPDKDVDGFHPYNVGRLAQRIPVLRSCTPMGIMTLLKSTGVDTFGLD AVVVGASNIVGRPMSLELLLAGCTTTTCHRFTRNLEDKVRSADLVVVAVGKPGFIPGDWIKPGAIVIDVGINRLESGQLV GDVEFDVASQHASFITPVPGGVGPMTIASLLENTLYACEQYHD
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=298, Percent_Identity=44.6308724832215, Blast_Score=227, Evalue=1e-59, Organism=Homo sapiens, GI94721354, Length=291, Percent_Identity=43.6426116838488, Blast_Score=216, Evalue=2e-56, Organism=Homo sapiens, GI222418558, Length=291, Percent_Identity=41.9243986254296, Blast_Score=215, Evalue=4e-56, Organism=Homo sapiens, GI36796743, Length=198, Percent_Identity=30.3030303030303, Blast_Score=82, Evalue=4e-16, Organism=Escherichia coli, GI1786741, Length=284, Percent_Identity=71.830985915493, Blast_Score=425, Evalue=1e-120, Organism=Caenorhabditis elegans, GI17568735, Length=289, Percent_Identity=39.4463667820069, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6321643, Length=301, Percent_Identity=43.1893687707641, Blast_Score=231, Evalue=9e-62, Organism=Saccharomyces cerevisiae, GI6319558, Length=285, Percent_Identity=44.5614035087719, Blast_Score=226, Evalue=3e-60, Organism=Saccharomyces cerevisiae, GI6322933, Length=311, Percent_Identity=27.6527331189711, Blast_Score=84, Evalue=4e-17, Organism=Drosophila melanogaster, GI17136818, Length=297, Percent_Identity=48.8215488215488, Blast_Score=261, Evalue=3e-70, Organism=Drosophila melanogaster, GI17136816, Length=297, Percent_Identity=48.8215488215488, Blast_Score=261, Evalue=4e-70, Organism=Drosophila melanogaster, GI24645718, Length=290, Percent_Identity=43.7931034482759, Blast_Score=225, Evalue=3e-59, Organism=Drosophila melanogaster, GI17137370, Length=290, Percent_Identity=43.7931034482759, Blast_Score=225, Evalue=3e-59, Organism=Drosophila melanogaster, GI62472483, Length=290, Percent_Identity=43.7931034482759, Blast_Score=224, Evalue=4e-59, Organism=Drosophila melanogaster, GI45551871, Length=290, Percent_Identity=43.7931034482759, Blast_Score=224, Evalue=4e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 30494; Mature: 30363
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQNIDGKAIAQSIRTQLKDKVTARKEAGKRVPGLAVILVGADPASQVYVGSKRKACEE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCHHHHHHH VGFISRSYDLDSSTSEDALLSLIDECNEDPTIDGILVQLPLPEHIEESKVIERIRPDKDV HHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCC DGFHPYNVGRLAQRIPVLRSCTPMGIMTLLKSTGVDTFGLDAVVVGASNIVGRPMSLELL CCCCCCCHHHHHHHCHHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCHHHHCCCCEEEEE LAGCTTTTCHRFTRNLEDKVRSADLVVVAVGKPGFIPGDWIKPGAIVIDVGINRLESGQL EECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCE VGDVEFDVASQHASFITPVPGGVGPMTIASLLENTLYACEQYHD EEEEEHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TAQNIDGKAIAQSIRTQLKDKVTARKEAGKRVPGLAVILVGADPASQVYVGSKRKACEE CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCHHHHHHH VGFISRSYDLDSSTSEDALLSLIDECNEDPTIDGILVQLPLPEHIEESKVIERIRPDKDV HHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCC DGFHPYNVGRLAQRIPVLRSCTPMGIMTLLKSTGVDTFGLDAVVVGASNIVGRPMSLELL CCCCCCCHHHHHHHCHHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCHHHHCCCCEEEEE LAGCTTTTCHRFTRNLEDKVRSADLVVVAVGKPGFIPGDWIKPGAIVIDVGINRLESGQL EECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCE VGDVEFDVASQHASFITPVPGGVGPMTIASLLENTLYACEQYHD EEEEEHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA