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The map label for this gene is ycjF [C]

Identifier: 157962486

GI number: 157962486

Start: 3248391

End: 3249503

Strand: Reverse

Name: ycjF [C]

Synonym: Spea_2665

Alternate gene names: 157962486

Gene position: 3249503-3248391 (Counterclockwise)

Preceding gene: 157962487

Following gene: 157962485

Centisome position: 62.8

GC content: 45.37

Gene sequence:

>1113_bases
ATGTCACAAGGTGATAATTCCATAAGAAAGCAGCAGCGATTTGACAGCGATGCCAATGAGCCTGAATCGAAACTTGCTCA
CTCTGTTAGCTTCGAGGCGCAGGTCGATTTTATTGAGGCTGAAGCGGAGCCTGAGCTAGAGCTTAAAGCAAATGCAGAGC
TTGATTCGCTGGTCGAGCAGCGTTTATCCAATTTCGAATCAATAGCCCCACAGAAACCTGGCAAAACCAAGCGTAACTGG
CTTGCCAGGATCAGTTTAACGGGCGTTGCTATCGTTATCGCAGTAGAAGCATTTCTTGGTCTACAGGCTGCTTTTGTGCA
AAGCAGTTGGTTATTTGGGCTTTACGCCAGTGTGACTGGGGTCGTATTACTTTGGGCCGCCAAGGTGACTTTTGTTGAAT
GGCGTAAGTTAAAGGCGCTTAAGCATATCGAAGACACACAAACTGTCGGCAAGCGTCTAGTTCACAGTATGCAGATGGGG
GAGGCCGATCCCTTTATCGATGAGATAGTCGCAAAATTGCCAAAGACTGCAGAACTGACAAAGTTTCAACAAAATAACAC
GCCAGAGCATAACGATGCCGAGAAATTGATGTTGTTCGACTCTATCGTGTTAACCGAACGAGATTTAGTGGCTAAGAAAA
TCGTACGCCGATTTGCCCAGGAGTCAGCGTTGCTATTGGCTGCTAGCCCTCTAGCAGTATTGGACATGGCGATTATTCTT
TGGCGTAACCAGAGCATGATCAATAAGATTGCCGATTGCTATGGGATAGAGTTGGGTTACTGGAGCAGAATAAAGCTTAT
TCGTAGCATTATTGGCAATATTATCTATGCAGGTTCCAGTGAGATTATTACCGATTTAGGCACTCAGTTATTGTCGGTAG
AAATGTCTGGTAAGTTATCGGCTAGACTTGGGCAAGGGCTAGGTGGTGGATTACTAACGGCAAGGCTCGGCTATCAAGCG
ATGGCATTATGTCGTCCGCTTGAGTTTAATCAACAATCAAAGCCTAAGCTTTCAGGGATCCATAAAGAGCTGCTACTCAG
TTTAAAAGAGCTATCATCGAGTGTACTGTCTAAAACCGTTAAGGCGGAGAAGGCCAAAGTCCATAAAGATTAA

Upstream 100 bases:

>100_bases
CCCAGCGCAGTAATGCCGACTTTGAACATATTCGATTAGATCATGTGTTGCAGTACTTGCTGGGCGATAAATTAAAGTGA
TTTTTAGTAAGTGAGTTTTT

Downstream 100 bases:

>100_bases
CTCTTTTTAAAAGCTAAACTGGAGTATTTAAGCTACAACTTACTACAGCGAAAGCTCAATAAGATTAGACGAATCACAGA
AAGCTCTGTTCATAATAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MSQGDNSIRKQQRFDSDANEPESKLAHSVSFEAQVDFIEAEAEPELELKANAELDSLVEQRLSNFESIAPQKPGKTKRNW
LARISLTGVAIVIAVEAFLGLQAAFVQSSWLFGLYASVTGVVLLWAAKVTFVEWRKLKALKHIEDTQTVGKRLVHSMQMG
EADPFIDEIVAKLPKTAELTKFQQNNTPEHNDAEKLMLFDSIVLTERDLVAKKIVRRFAQESALLLAASPLAVLDMAIIL
WRNQSMINKIADCYGIELGYWSRIKLIRSIIGNIIYAGSSEIITDLGTQLLSVEMSGKLSARLGQGLGGGLLTARLGYQA
MALCRPLEFNQQSKPKLSGIHKELLLSLKELSSSVLSKTVKAEKAKVHKD

Sequences:

>Translated_370_residues
MSQGDNSIRKQQRFDSDANEPESKLAHSVSFEAQVDFIEAEAEPELELKANAELDSLVEQRLSNFESIAPQKPGKTKRNW
LARISLTGVAIVIAVEAFLGLQAAFVQSSWLFGLYASVTGVVLLWAAKVTFVEWRKLKALKHIEDTQTVGKRLVHSMQMG
EADPFIDEIVAKLPKTAELTKFQQNNTPEHNDAEKLMLFDSIVLTERDLVAKKIVRRFAQESALLLAASPLAVLDMAIIL
WRNQSMINKIADCYGIELGYWSRIKLIRSIIGNIIYAGSSEIITDLGTQLLSVEMSGKLSARLGQGLGGGLLTARLGYQA
MALCRPLEFNQQSKPKLSGIHKELLLSLKELSSSVLSKTVKAEKAKVHKD
>Mature_369_residues
SQGDNSIRKQQRFDSDANEPESKLAHSVSFEAQVDFIEAEAEPELELKANAELDSLVEQRLSNFESIAPQKPGKTKRNWL
ARISLTGVAIVIAVEAFLGLQAAFVQSSWLFGLYASVTGVVLLWAAKVTFVEWRKLKALKHIEDTQTVGKRLVHSMQMGE
ADPFIDEIVAKLPKTAELTKFQQNNTPEHNDAEKLMLFDSIVLTERDLVAKKIVRRFAQESALLLAASPLAVLDMAIILW
RNQSMINKIADCYGIELGYWSRIKLIRSIIGNIIYAGSSEIITDLGTQLLSVEMSGKLSARLGQGLGGGLLTARLGYQAM
ALCRPLEFNQQSKPKLSGIHKELLLSLKELSSSVLSKTVKAEKAKVHKD

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family [H]

Homologues:

Organism=Escherichia coli, GI1787582, Length=203, Percent_Identity=39.4088669950739, Blast_Score=155, Evalue=4e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021147
- InterPro:   IPR006507 [H]

Pfam domain/function: PF05128 DUF697 [H]

EC number: NA

Molecular weight: Translated: 40960; Mature: 40829

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQGDNSIRKQQRFDSDANEPESKLAHSVSFEAQVDFIEAEAEPELELKANAELDSLVEQ
CCCCCHHHHHHHHCCCCCCCHHHHHHHHCCHHHEEEEEECCCCCCEEEECCCCHHHHHHH
RLSNFESIAPQKPGKTKRNWLARISLTGVAIVIAVEAFLGLQAAFVQSSWLFGLYASVTG
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVLLWAAKVTFVEWRKLKALKHIEDTQTVGKRLVHSMQMGEADPFIDEIVAKLPKTAELT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHH
KFQQNNTPEHNDAEKLMLFDSIVLTERDLVAKKIVRRFAQESALLLAASPLAVLDMAIIL
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHH
WRNQSMINKIADCYGIELGYWSRIKLIRSIIGNIIYAGSSEIITDLGTQLLSVEMSGKLS
HCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCCHH
ARLGQGLGGGLLTARLGYQAMALCRPLEFNQQSKPKLSGIHKELLLSLKELSSSVLSKTV
HHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KAEKAKVHKD
HHHHHHCCCC
>Mature Secondary Structure 
SQGDNSIRKQQRFDSDANEPESKLAHSVSFEAQVDFIEAEAEPELELKANAELDSLVEQ
CCCCHHHHHHHHCCCCCCCHHHHHHHHCCHHHEEEEEECCCCCCEEEECCCCHHHHHHH
RLSNFESIAPQKPGKTKRNWLARISLTGVAIVIAVEAFLGLQAAFVQSSWLFGLYASVTG
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVLLWAAKVTFVEWRKLKALKHIEDTQTVGKRLVHSMQMGEADPFIDEIVAKLPKTAELT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHH
KFQQNNTPEHNDAEKLMLFDSIVLTERDLVAKKIVRRFAQESALLLAASPLAVLDMAIIL
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHH
WRNQSMINKIADCYGIELGYWSRIKLIRSIIGNIIYAGSSEIITDLGTQLLSVEMSGKLS
HCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCCHH
ARLGQGLGGGLLTARLGYQAMALCRPLEFNQQSKPKLSGIHKELLLSLKELSSSVLSKTV
HHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KAEKAKVHKD
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]