Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is yibL [H]
Identifier: 157962438
GI number: 157962438
Start: 3186800
End: 3187156
Strand: Reverse
Name: yibL [H]
Synonym: Spea_2617
Alternate gene names: 157962438
Gene position: 3187156-3186800 (Counterclockwise)
Preceding gene: 157962439
Following gene: 157962437
Centisome position: 61.59
GC content: 44.26
Gene sequence:
>357_bases ATGAATTTAAAGCAGGAGCTGCAAACGCTCAACGATAAGTTAGACAAATTTCGTCGTAAGCTAGCAGCAGCTGAAAAGCG TGCCGATCCTACAATCGTGATGCAGTTTAAGAAAGAAATTGCCGCGATCACTAAGCGGATCAGCAGTGTTAAAGGTCAAC AGACTCGTGAGCTAAGCAAAGAAGGCAGTACAGTTGTTGGCCTTAAGTTTAACCGTGTACTGACTAAAGCCGAACAGGCT GACATGGGTAAGTTGAAAAAGTCAGTTAAAGGTCTGGTAGTTGTGCACCCAATGACGGCATTAGGCCGTGAAATGGGGAT TAAGCAAGTTACTGGCTTCGCTCCAAAAGAGTTTTAA
Upstream 100 bases:
>100_bases ATACTGTTATAATGTGGCAATAATGACAAAGCTGCATCAGTTCACTGATGCTGTTTTTGTTTCTAAACGTGTTAATTAGA TTTGAATTTAAGGTCTGTAA
Downstream 100 bases:
>100_bases GTATTTTTAGTTATTCATTTAGTGAGCCGCTTCATGGTTATCGCTAAGTACTAAGCTTATGCTGGCTCTATGACCGTTTA TGGCGATTGAAGATTTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MNLKQELQTLNDKLDKFRRKLAAAEKRADPTIVMQFKKEIAAITKRISSVKGQQTRELSKEGSTVVGLKFNRVLTKAEQA DMGKLKKSVKGLVVVHPMTALGREMGIKQVTGFAPKEF
Sequences:
>Translated_118_residues MNLKQELQTLNDKLDKFRRKLAAAEKRADPTIVMQFKKEIAAITKRISSVKGQQTRELSKEGSTVVGLKFNRVLTKAEQA DMGKLKKSVKGLVVVHPMTALGREMGIKQVTGFAPKEF >Mature_118_residues MNLKQELQTLNDKLDKFRRKLAAAEKRADPTIVMQFKKEIAAITKRISSVKGQQTRELSKEGSTVVGLKFNRVLTKAEQA DMGKLKKSVKGLVVVHPMTALGREMGIKQVTGFAPKEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790030, Length=121, Percent_Identity=46.2809917355372, Blast_Score=102, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021230 [H]
Pfam domain/function: PF10928 DUF2810 [H]
EC number: NA
Molecular weight: Translated: 13185; Mature: 13185
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLKQELQTLNDKLDKFRRKLAAAEKRADPTIVMQFKKEIAAITKRISSVKGQQTRELSK CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH EGSTVVGLKFNRVLTKAEQADMGKLKKSVKGLVVVHPMTALGREMGIKQVTGFAPKEF CCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHCHHHHHCCCCCCC >Mature Secondary Structure MNLKQELQTLNDKLDKFRRKLAAAEKRADPTIVMQFKKEIAAITKRISSVKGQQTRELSK CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH EGSTVVGLKFNRVLTKAEQADMGKLKKSVKGLVVVHPMTALGREMGIKQVTGFAPKEF CCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]