Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
---|---|
Accession | NC_009901 |
Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is pspE [C]
Identifier: 157962434
GI number: 157962434
Start: 3184121
End: 3184516
Strand: Direct
Name: pspE [C]
Synonym: Spea_2613
Alternate gene names: 157962434
Gene position: 3184121-3184516 (Clockwise)
Preceding gene: 157962433
Following gene: 157962435
Centisome position: 61.53
GC content: 42.93
Gene sequence:
>396_bases ATGAGTAACGCTTTTAATTTACAGCATAAACTACCAAAAAATATGATTTGGTTGTTAGGGCTAAGTGTTTTACTAATGAT GCTTAGCACATTTGCTAGCGCCGCCGATCAAGACGCTAAAGTGGCTTGGCAAAAAATTGAAGCTGGTGCATTAGTTGTAG ACGTGCGCACACCTGGTGAATTTGCTCAGGGCCACCTACCGAACGCTATCAATATTCCTTATGAGCAAATTAATAGTGCA TTTAGCAAGCAGCAGATAGCAAAAGATCGCTCTGTAGTGGTCTATTGTCGTAGCGGAAACCGCAGCGGCATCGCCAATAA GATGCTTGTGAGCGAAGGTTACACTAACGTTTACAACGGTGGTGGATACCAAATGTTGATGAGTCAACAGCACTAA
Upstream 100 bases:
>100_bases TTGTCCGGCAGCCATAATTATGCGCAAGCTAGGTTTGAAGTCTGAAGCACAGTTAGCGACTGCCAATCAAAAATAAATAA CGACAAATATAGGTATATTG
Downstream 100 bases:
>100_bases GCAGTAGAGCACATAGATTGAAAGGCCGCTTATTGTGGCCTTTTTATTTAGCGACAATTTAATGACCAAGATCTGTAATT AATAAGCTGATATAATTGGC
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: Phage Shock Protein E; Rhodanese Domain Protein; Rhodanese-Related Sulfurtransferase; Rhodanese-Like Domain-Containing Protein; Rhodanese-Like Protein; Rhodanese-Like Domain Protein; Rhodanese Family Protein; Phage Shock Protein; Phage Shock Protein PspE; Phage Shock Operon Rhodanese PspE; Metallo-Beta-Lactamase Superfamily Protein; MerR Family Transcriptional Regulator; Periplasmic Protein
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MSNAFNLQHKLPKNMIWLLGLSVLLMMLSTFASAADQDAKVAWQKIEAGALVVDVRTPGEFAQGHLPNAINIPYEQINSA FSKQQIAKDRSVVVYCRSGNRSGIANKMLVSEGYTNVYNGGGYQMLMSQQH
Sequences:
>Translated_131_residues MSNAFNLQHKLPKNMIWLLGLSVLLMMLSTFASAADQDAKVAWQKIEAGALVVDVRTPGEFAQGHLPNAINIPYEQINSA FSKQQIAKDRSVVVYCRSGNRSGIANKMLVSEGYTNVYNGGGYQMLMSQQH >Mature_130_residues SNAFNLQHKLPKNMIWLLGLSVLLMMLSTFASAADQDAKVAWQKIEAGALVVDVRTPGEFAQGHLPNAINIPYEQINSAF SKQQIAKDRSVVVYCRSGNRSGIANKMLVSEGYTNVYNGGGYQMLMSQQH
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787567, Length=72, Percent_Identity=38.8888888888889, Blast_Score=62, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14435; Mature: 14304
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAFNLQHKLPKNMIWLLGLSVLLMMLSTFASAADQDAKVAWQKIEAGALVVDVRTPGE CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEECCCCH FAQGHLPNAINIPYEQINSAFSKQQIAKDRSVVVYCRSGNRSGIANKMLVSEGYTNVYNG HHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCC GGYQMLMSQQH CCEEEEEECCC >Mature Secondary Structure SNAFNLQHKLPKNMIWLLGLSVLLMMLSTFASAADQDAKVAWQKIEAGALVVDVRTPGE CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEECCCCH FAQGHLPNAINIPYEQINSAFSKQQIAKDRSVVVYCRSGNRSGIANKMLVSEGYTNVYNG HHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCC GGYQMLMSQQH CCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA