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The map label for this gene is yfcN [C]

Identifier: 157962411

GI number: 157962411

Start: 3153461

End: 3153991

Strand: Direct

Name: yfcN [C]

Synonym: Spea_2590

Alternate gene names: 157962411

Gene position: 3153461-3153991 (Clockwise)

Preceding gene: 157962404

Following gene: 157962413

Centisome position: 60.94

GC content: 46.89

Gene sequence:

>531_bases
ATGAATAAAAGCAAAGATAACGACGATTTGGCCCTTTTTGCAGAGTTAACTAAAGGAATAAAACCTTTTCAGCAAAATAA
GCGTCATTTTATAGCGGCTCCTAAGGACCGAAAAATCATTGAAGAGAAAGAGCAGCAACTGCATGCTGACAGCTATTTCT
CCGATACCTATCAACCTCTATTGCCGGTTAATGGTCCGATGAAGTGGGCGCGAGACGATGTGGATAACCATGAGGTTAAG
CGTCTACGTCGCGGTGACTATGTACCGGATCTATTGCTCGATATGCATGGCATGCGCCAAACCGAGGCTAAGCTCGAACT
TGCTGCACTGATCCAAGCTTGCATCAAGCAGCAGAGTCACTGCTGTTGTGTGATGCATGGTCACGGAACCGGAATTTTAA
AACAAAACATCCCAATGTGGTTGGCGCAGCATCCTCATGTCAAAGCCTTCCATCAAGCCACTAAAGAATGGGGGGGGGAT
GCGGCGCTTTTAGTATTGATAGACATTGGCGACCAGCCCTATCGTCGCTGA

Upstream 100 bases:

>100_bases
ATCAACAAAAATCTTATCCAAAATTCGCTCCAACTTTTTAATTCCGACTCATTGTAACTGAACTCTATTCATATGGCATC
GGATTCAATAAAATAGAAGG

Downstream 100 bases:

>100_bases
TGCTCATACACTTAAACAGACATAGACGATCGTTATAGAAAACAAAAATAAATAATACAGCCCCCAGATTGTAGGCCTGA
AAGTAAAAAAAGTGAGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MNKSKDNDDLALFAELTKGIKPFQQNKRHFIAAPKDRKIIEEKEQQLHADSYFSDTYQPLLPVNGPMKWARDDVDNHEVK
RLRRGDYVPDLLLDMHGMRQTEAKLELAALIQACIKQQSHCCCVMHGHGTGILKQNIPMWLAQHPHVKAFHQATKEWGGD
AALLVLIDIGDQPYRR

Sequences:

>Translated_176_residues
MNKSKDNDDLALFAELTKGIKPFQQNKRHFIAAPKDRKIIEEKEQQLHADSYFSDTYQPLLPVNGPMKWARDDVDNHEVK
RLRRGDYVPDLLLDMHGMRQTEAKLELAALIQACIKQQSHCCCVMHGHGTGILKQNIPMWLAQHPHVKAFHQATKEWGGD
AALLVLIDIGDQPYRR
>Mature_176_residues
MNKSKDNDDLALFAELTKGIKPFQQNKRHFIAAPKDRKIIEEKEQQLHADSYFSDTYQPLLPVNGPMKWARDDVDNHEVK
RLRRGDYVPDLLLDMHGMRQTEAKLELAALIQACIKQQSHCCCVMHGHGTGILKQNIPMWLAQHPHVKAFHQATKEWGGD
AALLVLIDIGDQPYRR

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1788671, Length=171, Percent_Identity=52.046783625731, Blast_Score=180, Evalue=4e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 20201; Mature: 20201

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSKDNDDLALFAELTKGIKPFQQNKRHFIAAPKDRKIIEEKEQQLHADSYFSDTYQPL
CCCCCCCCHHHHHHHHHHCCCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
LPVNGPMKWARDDVDNHEVKRLRRGDYVPDLLLDMHGMRQTEAKLELAALIQACIKQQSH
CCCCCCCHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
CCCVMHGHGTGILKQNIPMWLAQHPHVKAFHQATKEWGGDAALLVLIDIGDQPYRR
EEEEEECCCCEEECCCCCHHHHCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCC
>Mature Secondary Structure
MNKSKDNDDLALFAELTKGIKPFQQNKRHFIAAPKDRKIIEEKEQQLHADSYFSDTYQPL
CCCCCCCCHHHHHHHHHHCCCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
LPVNGPMKWARDDVDNHEVKRLRRGDYVPDLLLDMHGMRQTEAKLELAALIQACIKQQSH
CCCCCCCHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
CCCVMHGHGTGILKQNIPMWLAQHPHVKAFHQATKEWGGDAALLVLIDIGDQPYRR
EEEEEECCCCEEECCCCCHHHHCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA