Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is yfcL [C]
Identifier: 157962406
GI number: 157962406
Start: 3148503
End: 3148772
Strand: Reverse
Name: yfcL [C]
Synonym: Spea_2585
Alternate gene names: 157962406
Gene position: 3148772-3148503 (Counterclockwise)
Preceding gene: 157962407
Following gene: 157962405
Centisome position: 60.85
GC content: 46.3
Gene sequence:
>270_bases ATGATAGAGCAGTACGAGCAAACACTACAAGACTGGATTGAAACCATTGTTGCCGAAGGTGATGATGACGCGTTATTTGC AAGTGGTTATTTACAGGGGCATGTGGCCGTTGTTCTTTCGCAACTTGAAGTCGAGAGCGAGCAGGGACTTAGTGCGTTAG ATGCTAAAATGAGCGAGTGTTTGGCACTGGCAAGAGATGAGCTAAGTGACACCGATTACGCATTGGTCGATGATGCGTGG ACACAATTAAGTGAGAAGCTAGCAGCTTAA
Upstream 100 bases:
>100_bases TGCGCTTGGTGATGTTAATTTACGATTTGAAGAGATGTTTGGAGTGACGGTCGAACAGTTATAGACCAACACTCCAATCG ATAAGCATGTGGAGCCCTCA
Downstream 100 bases:
>100_bases TGCCACTGTGATGAGTGCTATGTGTTAAGTGCTATAGATAGTGTGATGAGAGTTTAAGCTTTTATGAGTATGATTAGTTT TGTTGCAATCGGTCTAGTTA
Product: YfcL protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MIEQYEQTLQDWIETIVAEGDDDALFASGYLQGHVAVVLSQLEVESEQGLSALDAKMSECLALARDELSDTDYALVDDAW TQLSEKLAA
Sequences:
>Translated_89_residues MIEQYEQTLQDWIETIVAEGDDDALFASGYLQGHVAVVLSQLEVESEQGLSALDAKMSECLALARDELSDTDYALVDDAW TQLSEKLAA >Mature_89_residues MIEQYEQTLQDWIETIVAEGDDDALFASGYLQGHVAVVLSQLEVESEQGLSALDAKMSECLALARDELSDTDYALVDDAW TQLSEKLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9782; Mature: 9782
Theoretical pI: Translated: 3.47; Mature: 3.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEQYEQTLQDWIETIVAEGDDDALFASGYLQGHVAVVLSQLEVESEQGLSALDAKMSEC CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LALARDELSDTDYALVDDAWTQLSEKLAA HHHHHHHCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIEQYEQTLQDWIETIVAEGDDDALFASGYLQGHVAVVLSQLEVESEQGLSALDAKMSEC CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LALARDELSDTDYALVDDAWTQLSEKLAA HHHHHHHCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA