Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is yfcL [C]

Identifier: 157962406

GI number: 157962406

Start: 3148503

End: 3148772

Strand: Reverse

Name: yfcL [C]

Synonym: Spea_2585

Alternate gene names: 157962406

Gene position: 3148772-3148503 (Counterclockwise)

Preceding gene: 157962407

Following gene: 157962405

Centisome position: 60.85

GC content: 46.3

Gene sequence:

>270_bases
ATGATAGAGCAGTACGAGCAAACACTACAAGACTGGATTGAAACCATTGTTGCCGAAGGTGATGATGACGCGTTATTTGC
AAGTGGTTATTTACAGGGGCATGTGGCCGTTGTTCTTTCGCAACTTGAAGTCGAGAGCGAGCAGGGACTTAGTGCGTTAG
ATGCTAAAATGAGCGAGTGTTTGGCACTGGCAAGAGATGAGCTAAGTGACACCGATTACGCATTGGTCGATGATGCGTGG
ACACAATTAAGTGAGAAGCTAGCAGCTTAA

Upstream 100 bases:

>100_bases
TGCGCTTGGTGATGTTAATTTACGATTTGAAGAGATGTTTGGAGTGACGGTCGAACAGTTATAGACCAACACTCCAATCG
ATAAGCATGTGGAGCCCTCA

Downstream 100 bases:

>100_bases
TGCCACTGTGATGAGTGCTATGTGTTAAGTGCTATAGATAGTGTGATGAGAGTTTAAGCTTTTATGAGTATGATTAGTTT
TGTTGCAATCGGTCTAGTTA

Product: YfcL protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MIEQYEQTLQDWIETIVAEGDDDALFASGYLQGHVAVVLSQLEVESEQGLSALDAKMSECLALARDELSDTDYALVDDAW
TQLSEKLAA

Sequences:

>Translated_89_residues
MIEQYEQTLQDWIETIVAEGDDDALFASGYLQGHVAVVLSQLEVESEQGLSALDAKMSECLALARDELSDTDYALVDDAW
TQLSEKLAA
>Mature_89_residues
MIEQYEQTLQDWIETIVAEGDDDALFASGYLQGHVAVVLSQLEVESEQGLSALDAKMSECLALARDELSDTDYALVDDAW
TQLSEKLAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9782; Mature: 9782

Theoretical pI: Translated: 3.47; Mature: 3.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEQYEQTLQDWIETIVAEGDDDALFASGYLQGHVAVVLSQLEVESEQGLSALDAKMSEC
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LALARDELSDTDYALVDDAWTQLSEKLAA
HHHHHHHCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIEQYEQTLQDWIETIVAEGDDDALFASGYLQGHVAVVLSQLEVESEQGLSALDAKMSEC
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LALARDELSDTDYALVDDAWTQLSEKLAA
HHHHHHHCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA