Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is grxA [H]
Identifier: 157962381
GI number: 157962381
Start: 3117970
End: 3118236
Strand: Direct
Name: grxA [H]
Synonym: Spea_2560
Alternate gene names: 157962381
Gene position: 3117970-3118236 (Clockwise)
Preceding gene: 157962380
Following gene: 157962392
Centisome position: 60.26
GC content: 39.7
Gene sequence:
>267_bases ATGTTTGTTGTAATTTTCGGTCGTCCAGGTTGTCCTTATTGTGTTCGTGCTGTACAAGTTGCCGAGCAACTCACAGAAAA GCGCGATGATTTTAAATTTAAGTACGTAGACATTCATGCTGAAGGGATCAGTAAAGCTGATCTAGAAAAAACAGTAGGTA AGCCAGTTGAAACTGTGCCACAAATCTTTGTTGATCAAGTACACGTTGGTGGTTGTACTGAGTTTGTACAATACGTAAGT GACAACGAATTAATGCCAGCTGCATAA
Upstream 100 bases:
>100_bases GTAAAAATCAGTAAATCGATTAACACGAATTTAAATATCGATTAGAACAATTGCAATCGCTATGATATAAAGTGTTCAAG CTAAAACTGAGGAAGCTATC
Downstream 100 bases:
>100_bases GTAAAATGTTCAGATCATCATAAAAAAGGAGGCCAAGGCCTCCTTTTTTGCGTTAGATAGACTAAAGCACGTACTTCATT GAAAATATCACTCGATTTAA
Product: glutaredoxin 1
Products: deoxyribonucleotides [C]
Alternate protein names: Grx1 [H]
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MFVVIFGRPGCPYCVRAVQVAEQLTEKRDDFKFKYVDIHAEGISKADLEKTVGKPVETVPQIFVDQVHVGGCTEFVQYVS DNELMPAA
Sequences:
>Translated_88_residues MFVVIFGRPGCPYCVRAVQVAEQLTEKRDDFKFKYVDIHAEGISKADLEKTVGKPVETVPQIFVDQVHVGGCTEFVQYVS DNELMPAA >Mature_88_residues MFVVIFGRPGCPYCVRAVQVAEQLTEKRDDFKFKYVDIHAEGISKADLEKTVGKPVETVPQIFVDQVHVGGCTEFVQYVS DNELMPAA
Specific function: The disulfide bond functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. In addition, it is also involved in reducing some disulfides in a coupled system with glutathione re
COG id: COG0695
COG function: function code O; Glutaredoxin and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1787073, Length=82, Percent_Identity=64.6341463414634, Blast_Score=120, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011767 - InterPro: IPR002109 - InterPro: IPR014025 - InterPro: IPR011902 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin [H]
EC number: NA
Molecular weight: Translated: 9836; Mature: 9836
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00195 GLUTAREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVVIFGRPGCPYCVRAVQVAEQLTEKRDDFKFKYVDIHAEGISKADLEKTVGKPVETVP CEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHCCCCHHHHH QIFVDQVHVGGCTEFVQYVSDNELMPAA HHHHHHCCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MFVVIFGRPGCPYCVRAVQVAEQLTEKRDDFKFKYVDIHAEGISKADLEKTVGKPVETVP CEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHCCCCHHHHH QIFVDQVHVGGCTEFVQYVSDNELMPAA HHHHHHCCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ribonucleotides [C]
Specific reaction: ribonucleotides = deoxyribonucleotides [C]
General reaction: deoxyribonucleotide biosynthesis [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]