Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
---|---|
Accession | NC_009901 |
Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is aat [H]
Identifier: 157962350
GI number: 157962350
Start: 3080451
End: 3081161
Strand: Direct
Name: aat [H]
Synonym: Spea_2529
Alternate gene names: 157962350
Gene position: 3080451-3081161 (Clockwise)
Preceding gene: 157962348
Following gene: 157962351
Centisome position: 59.53
GC content: 45.85
Gene sequence:
>711_bases GTGAACTCACTGTCCTATTTAAATCACGCGCAGCAAGCTTTTCCGCCTCCAGAGCAAGCCTTAATAGAGCCTAATGGCTT GTTGGCCGTTGGCGGAGATCTTCATCCTGAACGCCTACTAAATGCTTATTACAACGGTATTTTCCCTTGGTTTAACCTCG ATGATCCTATCCTGTGGTGGTCGCCGGACCCCCGAGCCGTTTTTGTGCCCGGCAATATGAAAATCAGCCGCAGTTTAGTC AAGTATCTTAAGAAACAGAATTGGACTTATACCATTAACCATGCATTCGAAGCAGTCACAGCCGGCTGCGCAGAGCCTAG AGCTGGACAAGATGGCACTTGGATTTCAAGTGAAATCCAACAAGCCTATCTGTCTTTGCATCATCAAGGCCACGCTCACT CCCTTGAAGTTTGGCAAAATAATGAATTAATCGGTGGCCTTTACGGTTTAGCTATTGGGCAAGTTTTTTGCGGTGAATCT ATGTTTCATCGCACAACGAACGCCTCTAAAGCTGCTATGATCGTATTACAGCAACATTTACAGCGCTGTGGTTTTAAGCT GATAGACGCTCAAGTGGTCAATCCCCACTTAGACAGTCTTGGTGCTAAATCCATTAAGCGTGATGATTTTCTCAGGCTAT TAGCTCATCTCAGGGATGGTACAGTGAGTTTAGATAGCTGGCGCAAGTCCGAGGTAACCATTGAACTCTAA
Upstream 100 bases:
>100_bases AAAATAAACAGATAACCGTGAAAACAATAAGATGATGTTTCAACATAAGACTTTTTCCGCTAACTTTAAGGATAAGTATA TTTATTAATCTTACTCAATT
Downstream 100 bases:
>100_bases ATCTAGACCCGTCACAGTAGGCAGAACCAAGACCTTTCCTTGTAGTTATTTAGAAGCTCAACAAGAACAATTGATGGTTC TACAAGAAGAGGTTATCGAT
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase [H]
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MNSLSYLNHAQQAFPPPEQALIEPNGLLAVGGDLHPERLLNAYYNGIFPWFNLDDPILWWSPDPRAVFVPGNMKISRSLV KYLKKQNWTYTINHAFEAVTAGCAEPRAGQDGTWISSEIQQAYLSLHHQGHAHSLEVWQNNELIGGLYGLAIGQVFCGES MFHRTTNASKAAMIVLQQHLQRCGFKLIDAQVVNPHLDSLGAKSIKRDDFLRLLAHLRDGTVSLDSWRKSEVTIEL
Sequences:
>Translated_236_residues MNSLSYLNHAQQAFPPPEQALIEPNGLLAVGGDLHPERLLNAYYNGIFPWFNLDDPILWWSPDPRAVFVPGNMKISRSLV KYLKKQNWTYTINHAFEAVTAGCAEPRAGQDGTWISSEIQQAYLSLHHQGHAHSLEVWQNNELIGGLYGLAIGQVFCGES MFHRTTNASKAAMIVLQQHLQRCGFKLIDAQVVNPHLDSLGAKSIKRDDFLRLLAHLRDGTVSLDSWRKSEVTIEL >Mature_236_residues MNSLSYLNHAQQAFPPPEQALIEPNGLLAVGGDLHPERLLNAYYNGIFPWFNLDDPILWWSPDPRAVFVPGNMKISRSLV KYLKKQNWTYTINHAFEAVTAGCAEPRAGQDGTWISSEIQQAYLSLHHQGHAHSLEVWQNNELIGGLYGLAIGQVFCGES MFHRTTNASKAAMIVLQQHLQRCGFKLIDAQVVNPHLDSLGAKSIKRDDFLRLLAHLRDGTVSLDSWRKSEVTIEL
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine [H]
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family [H]
Homologues:
Organism=Escherichia coli, GI1787111, Length=224, Percent_Identity=53.125, Blast_Score=238, Evalue=4e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR004616 [H]
Pfam domain/function: PF03588 Leu_Phe_trans [H]
EC number: =2.3.2.6 [H]
Molecular weight: Translated: 26511; Mature: 26511
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLSYLNHAQQAFPPPEQALIEPNGLLAVGGDLHPERLLNAYYNGIFPWFNLDDPILWW CCCHHHHHHHHHHCCCCHHHEECCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEE SPDPRAVFVPGNMKISRSLVKYLKKQNWTYTINHAFEAVTAGCAEPRAGQDGTWISSEIQ CCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHH QAYLSLHHQGHAHSLEVWQNNELIGGLYGLAIGQVFCGESMFHRTTNASKAAMIVLQQHL HHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHH QRCGFKLIDAQVVNPHLDSLGAKSIKRDDFLRLLAHLRDGTVSLDSWRKSEVTIEL HHCCCEEEEHEECCCCHHHHCHHHCCHHHHHHHHHHHCCCCEECCCCCCCCEEEEC >Mature Secondary Structure MNSLSYLNHAQQAFPPPEQALIEPNGLLAVGGDLHPERLLNAYYNGIFPWFNLDDPILWW CCCHHHHHHHHHHCCCCHHHEECCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEE SPDPRAVFVPGNMKISRSLVKYLKKQNWTYTINHAFEAVTAGCAEPRAGQDGTWISSEIQ CCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHH QAYLSLHHQGHAHSLEVWQNNELIGGLYGLAIGQVFCGESMFHRTTNASKAAMIVLQQHL HHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHH QRCGFKLIDAQVVNPHLDSLGAKSIKRDDFLRLLAHLRDGTVSLDSWRKSEVTIEL HHCCCEEEEHEECCCCHHHHCHHHCCHHHHHHHHHHHCCCCEECCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA