Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
---|---|
Accession | NC_009901 |
Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157962334
Identifier: 157962334
GI number: 157962334
Start: 3061478
End: 3062350
Strand: Direct
Name: 157962334
Synonym: Spea_2513
Alternate gene names: NA
Gene position: 3061478-3062350 (Clockwise)
Preceding gene: 157962333
Following gene: 157962335
Centisome position: 59.16
GC content: 42.5
Gene sequence:
>873_bases ATGGTTAAAAGTTTCATCATTCGTTGCGCCACCATAATGGCCTTAGTCGCGAGTCCGGTCACTTTTGCGGATAACAGCAC TGTTATCCGAGTCGGTGGTTTTTATGCCAACACTGACTCGACCATAGATGTTAACGATCCCATTTTAGGCAATGACTTCA CTCTCGATTTTGAGGCAGATCTTAAGTTAGAAGAATCTCAGTTTTTACCTTTCTTCGAGTTTTCCCATCATTTTAACGAC CGCCACATCTTATACGTCGATTGGAAACAACTACACCGCAATGCTCTAGTTCAGTCGGTTGAAAAGCCGTTTCAGTTCAC TTGGGATGAAACAACATACGATATCAAGTCTGGGGTTTCGTTAGATACCACTCTCAATATCGATATCATGCGCATTGGCT ATGGTTACGATATCTGGCAAGGCCATAACTATGACATTGGTGTTTCAGTCGGCTTACATGCCATGTTCATCAAGACATCT TTCAAAGGCAATATAGGGATCTGTGAGATAGATACGGAAACTCGCTGTCCTGACACAATTGAAATCCCGAAAGTTGTAGA TGAAAAGCTCACCGCTCCCCTACCCGATATTGGTGTTTACGGCTCCTATGAGTTCTACCCAGGATTCAAACTCAATGCTC ATGCGCAATATTTCTATATCAAGCTAGACGACCTCAAAGGTGGTTTAGTTGATGTGAGGATGGGCGTTGAAGCAGCGATT AGTGAAAACTGGCATATGACGGCAGCCTTCAATTACTACGAAGTTGACGTTGAATATGAATCGACTATTACTTCAGCGGA TATCAAAATTGCCGATTACAACATCTATTACAGCTTCATCGGCCCTATGCTATCGGTAAGTTATCAGTTTTAA
Upstream 100 bases:
>100_bases ATTTATTCACATTTATAGGAATCCTGCTATGCTAGAAACCAAATAATAAAAGCACTATTCATTTAGTTCTAATAAGAATA AAAAAGCGGAGTCACTTTTA
Downstream 100 bases:
>100_bases GAGGGTTTCTTTACACGCTTTGAAAACACTTTTTATTTTAGGCGGTGAGGTTTCTCAAGACTTATCTTTCAATTGCAAAT TCAGTCTATAAATCATCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MVKSFIIRCATIMALVASPVTFADNSTVIRVGGFYANTDSTIDVNDPILGNDFTLDFEADLKLEESQFLPFFEFSHHFND RHILYVDWKQLHRNALVQSVEKPFQFTWDETTYDIKSGVSLDTTLNIDIMRIGYGYDIWQGHNYDIGVSVGLHAMFIKTS FKGNIGICEIDTETRCPDTIEIPKVVDEKLTAPLPDIGVYGSYEFYPGFKLNAHAQYFYIKLDDLKGGLVDVRMGVEAAI SENWHMTAAFNYYEVDVEYESTITSADIKIADYNIYYSFIGPMLSVSYQF
Sequences:
>Translated_290_residues MVKSFIIRCATIMALVASPVTFADNSTVIRVGGFYANTDSTIDVNDPILGNDFTLDFEADLKLEESQFLPFFEFSHHFND RHILYVDWKQLHRNALVQSVEKPFQFTWDETTYDIKSGVSLDTTLNIDIMRIGYGYDIWQGHNYDIGVSVGLHAMFIKTS FKGNIGICEIDTETRCPDTIEIPKVVDEKLTAPLPDIGVYGSYEFYPGFKLNAHAQYFYIKLDDLKGGLVDVRMGVEAAI SENWHMTAAFNYYEVDVEYESTITSADIKIADYNIYYSFIGPMLSVSYQF >Mature_290_residues MVKSFIIRCATIMALVASPVTFADNSTVIRVGGFYANTDSTIDVNDPILGNDFTLDFEADLKLEESQFLPFFEFSHHFND RHILYVDWKQLHRNALVQSVEKPFQFTWDETTYDIKSGVSLDTTLNIDIMRIGYGYDIWQGHNYDIGVSVGLHAMFIKTS FKGNIGICEIDTETRCPDTIEIPKVVDEKLTAPLPDIGVYGSYEFYPGFKLNAHAQYFYIKLDDLKGGLVDVRMGVEAAI SENWHMTAAFNYYEVDVEYESTITSADIKIADYNIYYSFIGPMLSVSYQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33034; Mature: 33034
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKSFIIRCATIMALVASPVTFADNSTVIRVGGFYANTDSTIDVNDPILGNDFTLDFEAD CCHHHHHHHHHHHHHHHCCEEECCCCCEEEECCEEECCCCEEECCCCCCCCEEEEEEECC LKLEESQFLPFFEFSHHFNDRHILYVDWKQLHRNALVQSVEKPFQFTWDETTYDIKSGVS CEECCCCCCCEEEHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCEEEECCEEEEHHCCCE LDTTLNIDIMRIGYGYDIWQGHNYDIGVSVGLHAMFIKTSFKGNIGICEIDTETRCPDTI EEEEEEEEEEEEECCEEECCCCCEEEEEEECEEEEEEEEECCCCEEEEEECCCCCCCCCE EIPKVVDEKLTAPLPDIGVYGSYEFYPGFKLNAHAQYFYIKLDDLKGGLVDVRMGVEAAI ECCHHHHHHHCCCCCCCCCCCCEEECCCEEECCCEEEEEEEEECCCCCEEEEEECCEEEC SENWHMTAAFNYYEVDVEYESTITSADIKIADYNIYYSFIGPMLSVSYQF CCCEEEEEEEEEEEEEEEECCEEEECEEEEEEEEEEEEECCCCEEEEECC >Mature Secondary Structure MVKSFIIRCATIMALVASPVTFADNSTVIRVGGFYANTDSTIDVNDPILGNDFTLDFEAD CCHHHHHHHHHHHHHHHCCEEECCCCCEEEECCEEECCCCEEECCCCCCCCEEEEEEECC LKLEESQFLPFFEFSHHFNDRHILYVDWKQLHRNALVQSVEKPFQFTWDETTYDIKSGVS CEECCCCCCCEEEHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCEEEECCEEEEHHCCCE LDTTLNIDIMRIGYGYDIWQGHNYDIGVSVGLHAMFIKTSFKGNIGICEIDTETRCPDTI EEEEEEEEEEEEECCEEECCCCCEEEEEEECEEEEEEEEECCCCEEEEEECCCCCCCCCE EIPKVVDEKLTAPLPDIGVYGSYEFYPGFKLNAHAQYFYIKLDDLKGGLVDVRMGVEAAI ECCHHHHHHHCCCCCCCCCCCCEEECCCEEECCCEEEEEEEEECCCCCEEEEEECCEEEC SENWHMTAAFNYYEVDVEYESTITSADIKIADYNIYYSFIGPMLSVSYQF CCCEEEEEEEEEEEEEEEECCEEEECEEEEEEEEEEEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA