Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962304
Identifier: 157962304
GI number: 157962304
Start: 3029284
End: 3030093
Strand: Direct
Name: 157962304
Synonym: Spea_2483
Alternate gene names: NA
Gene position: 3029284-3030093 (Clockwise)
Preceding gene: 157962303
Following gene: 157962305
Centisome position: 58.54
GC content: 43.46
Gene sequence:
>810_bases ATGCTTAAAAATACGCTATTACTCGCTCAGTTTGAGCTTAAAAAAATGCTTTTTAACCCAAGAGGCTTAATTGCACTCGT CGCATTTTCGCTCGTTTGGCTACTCATTTTGCTCTACCCTATTAGTGGTGCATCAAGCTTCTTACTCAACCCAGATTTTA GAGGCTTAATCGAAGGGATCTTCGGCCCACAAGCGGTAAACAAACTGTTTAAATGGCCAGTGGCGGAAATGGCTGTCTAT TGGATTGCAGCGCTTTATATCTTCCCACTATTTAGCATCTTTGTATCCGCAGACCAATTCGCAACCGATAAGTCACGAGG CACCTTCCGCTTCTACACTCTGAGAACAGGGCGAGACAGCCTGTTTTTTGGTCGTTACCTAGGTCATATGGCATTACAGA GTCTGTTACTAGTATTGACCGTCATTGCCACAATTGTGCTTGCCGTTAGCCGAGATGCAACACTGTTAATGCCGGCTCTA TTCTCAGGCCTTATCGTTACAGTTAACCTCATCATAGTATTATTACCTTATACCGCGTTGATGGCGCTATTATCGCTTTA TGCCAATTCGGCTCGCCAAGCTACTATCTACGCAATCTTAGTTTGGGCCCTGATGTCGGTGAGCATCGCTATCATCAACA ACTATTTACCCATTATCAGCGAATTGAAGTGGATCCTTCCAGGCTCTCAAATCTCCTTGATGATAAATACCCAAGGTTTA GGCAGCTTTATCTACGCTCCGGTACCATTATTACAAGCCATTGCGTTGCTGTTATTAGGCAAAATATATATCAATAGGAG CGCATTATGA
Upstream 100 bases:
>100_bases TTAAGATTAACGCCTAGCAAAAATAGGTGTTAATCTGACTTTAATGACAACATCTAACAATTAAGGGATTAGTTTGCAAA ACAGCTCCCAAAAAAATAGC
Downstream 100 bases:
>100_bases GCTTAGTGAGTTGCAAGGGCTTATCTAAGTCCTACGGTGGTAAACAAGCCTTAAGTCAAGTGAGCATTACCCTAGAAGCT GGCAGCCCTATAGCATTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MLKNTLLLAQFELKKMLFNPRGLIALVAFSLVWLLILLYPISGASSFLLNPDFRGLIEGIFGPQAVNKLFKWPVAEMAVY WIAALYIFPLFSIFVSADQFATDKSRGTFRFYTLRTGRDSLFFGRYLGHMALQSLLLVLTVIATIVLAVSRDATLLMPAL FSGLIVTVNLIIVLLPYTALMALLSLYANSARQATIYAILVWALMSVSIAIINNYLPIISELKWILPGSQISLMINTQGL GSFIYAPVPLLQAIALLLLGKIYINRSAL
Sequences:
>Translated_269_residues MLKNTLLLAQFELKKMLFNPRGLIALVAFSLVWLLILLYPISGASSFLLNPDFRGLIEGIFGPQAVNKLFKWPVAEMAVY WIAALYIFPLFSIFVSADQFATDKSRGTFRFYTLRTGRDSLFFGRYLGHMALQSLLLVLTVIATIVLAVSRDATLLMPAL FSGLIVTVNLIIVLLPYTALMALLSLYANSARQATIYAILVWALMSVSIAIINNYLPIISELKWILPGSQISLMINTQGL GSFIYAPVPLLQAIALLLLGKIYINRSAL >Mature_269_residues MLKNTLLLAQFELKKMLFNPRGLIALVAFSLVWLLILLYPISGASSFLLNPDFRGLIEGIFGPQAVNKLFKWPVAEMAVY WIAALYIFPLFSIFVSADQFATDKSRGTFRFYTLRTGRDSLFFGRYLGHMALQSLLLVLTVIATIVLAVSRDATLLMPAL FSGLIVTVNLIIVLLPYTALMALLSLYANSARQATIYAILVWALMSVSIAIINNYLPIISELKWILPGSQISLMINTQGL GSFIYAPVPLLQAIALLLLGKIYINRSAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29826; Mature: 29826
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKNTLLLAQFELKKMLFNPRGLIALVAFSLVWLLILLYPISGASSFLLNPDFRGLIEGI CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHH FGPQAVNKLFKWPVAEMAVYWIAALYIFPLFSIFVSADQFATDKSRGTFRFYTLRTGRDS CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCH LFFGRYLGHMALQSLLLVLTVIATIVLAVSRDATLLMPALFSGLIVTVNLIIVLLPYTAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MALLSLYANSARQATIYAILVWALMSVSIAIINNYLPIISELKWILPGSQISLMINTQGL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC GSFIYAPVPLLQAIALLLLGKIYINRSAL CHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLKNTLLLAQFELKKMLFNPRGLIALVAFSLVWLLILLYPISGASSFLLNPDFRGLIEGI CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHH FGPQAVNKLFKWPVAEMAVYWIAALYIFPLFSIFVSADQFATDKSRGTFRFYTLRTGRDS CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCH LFFGRYLGHMALQSLLLVLTVIATIVLAVSRDATLLMPALFSGLIVTVNLIIVLLPYTAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MALLSLYANSARQATIYAILVWALMSVSIAIINNYLPIISELKWILPGSQISLMINTQGL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC GSFIYAPVPLLQAIALLLLGKIYINRSAL CHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA