Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
---|---|
Accession | NC_009901 |
Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157962127
Identifier: 157962127
GI number: 157962127
Start: 2800665
End: 2802431
Strand: Direct
Name: 157962127
Synonym: Spea_2306
Alternate gene names: NA
Gene position: 2800665-2802431 (Clockwise)
Preceding gene: 157962126
Following gene: 157962128
Centisome position: 54.12
GC content: 42.33
Gene sequence:
>1767_bases ATGGCTGATTTATTCCAAGCCGATGCGCTAGATGATGAGCAGTTAGAATATATTCAAAATGAATTCTTTGCTGGTTTCAA GCGATACAAAAACAGCGATACGTTACCAGCAGGTCTCGATAAATACGACAAACTCGATGATTCTTTAAAGCATCAAGTTA GTATCAATTTATGTCGAGAACTATTGCGTGAACAAAAGAATAACGAAGGCTTTCCGTTAAAACACTTTATCGATGATGTT CAAAGTGTTTATTGTTCTGATAACCGCCCTTGGGTAATTGGCTACAGTGGTGGTAAAGATTCATCAGCCGTTGTCACGCT CATTTACCTAGCTCTGCTATCACTTGATGAATCTAAGCGCACCAAGCCAGTATATGTTGTGGCATCAGACACATTGGTAG AAACTCCATTAGTGGTCGATCATGTAAATCGTTCACTTGAAAGCATTGGCAATAATGCCAAGAAAGATGGTCTACCGTTA ACAACACATAAAGTATTACCAAAACCGCACCAAACGTTTTGGTCATGTTTACTGGGTAAAGGTTACCCTGCACCAACTCA AAGTTTCCGTTGGTGTACTGAGCGCATGAAAATCGATCCTGTTAGTGACTTTATTAAAGATAAGGTATCACAGCATGACG AAGTGATTGTTATTTTAGGCTCTCGCAGCCAAGAAAGTGCGTCTCGTGCGCAGGTTATCGCCAAGCATAAAATAGAAAAC ACACGACTAGCTCGTCACACCACACTAGCCAATGCATTTATCTATACACCAATTGATACCTGGAGTATGGACGATGTATG GAAGCTAATTCGCGCCTGTAGCTTAGAGGTGACCATTTCACCGATGGGTATAGGTAAAAAATGGGCTGATGAATATGGTC TTGAATGGGAAAACCCATGGGGTGGTAAAAACCTTACTCTATGGAACCTATATAAAGATTCATCAGACCAAGGCGAATGC CCAATGGTTATCGACGATAGTACGCCTTCATGCGGTAATTCACGTTTCGGTTGCTGGACATGTACCGTAGTCACAAAAGA CCGTGCAATGGAAAGCTTAATCCAAAACGGTGAAGAATGGATGCAGCCACTGCTAACATTCCGCAACAAGTTGGCTGAAA CCAATGTGCCGGCAAACAAAGATATCTACCGCAATTACAAACGACGCCAAGGTAAAGTCAATTACCAACGCGTAAAAGAC GGACAAGAATTATCTGAAGAACGCGCACACGTGCCCGGGCCTTATTGGCTTAAATACCGTAAAGAGTGGTTAACCGAACT GTTAGTGCAACAAAGAGAGTTCAATAAAGATGGCTATTCAGTCACCTTAGTTACCGAGCCTGAACTACACGCTATTCGCC AAGAATGGTTGAACGACCCGAACGAACCAGACTGGGCTGACTCACTACCAAAAATCTATCGCGAAGTATTTGGTGTCGAT CTTAATTGGGTAATTAACGACAACTCTAGTTTCGGTGAAGTTGAAGCGCAGATTCTTACCGATTTAGGCGAGCAATATAA CGTTGAGCCTGAAATGGTACAAAAGCTTTTGGATCTTGAGCTTTCTTTAGAAGGCCTAAGTCGTCGTACCGGTGTATTCG ATAAACTCGGTACCCTACTAAGGCAAGACTGGGGCACGCTTGATGAAATCAAACAGCGCCACGCTCAACTGCAAAGTAAG TCAGATTTTGATATCCATAAGGATCAAATCGACAAATATGAACGTGAAATTCTTGAGCTAGAAAAGCAAGCCAAGGTGGA GTTTTAA
Upstream 100 bases:
>100_bases ATGTTGACGACAAATGCACTCAAGCAAAGCTTATCTCTATCATTAACGCCGGAAGAACGCGCTCTAGAAAATAAACATAT ACCAAGTAGTGAGGCATCCA
Downstream 100 bases:
>100_bases GATGATAATCAAAAGCCTGGTGATCAATAACTTTCGAGTATTTCGTGGCGTACACGAGATTGACTTAGAACCAAGAGTAA CCCGTAAACACCAAACTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Sulfurtransferase DndC; 3-Phosphoadenosine 5'-Phosphosulfate Sulfotransferase; Phosphoadenosine Phosphosulphate Reductase; Sulfurtransferase Dndc
Number of amino acids: Translated: 588; Mature: 587
Protein sequence:
>588_residues MADLFQADALDDEQLEYIQNEFFAGFKRYKNSDTLPAGLDKYDKLDDSLKHQVSINLCRELLREQKNNEGFPLKHFIDDV QSVYCSDNRPWVIGYSGGKDSSAVVTLIYLALLSLDESKRTKPVYVVASDTLVETPLVVDHVNRSLESIGNNAKKDGLPL TTHKVLPKPHQTFWSCLLGKGYPAPTQSFRWCTERMKIDPVSDFIKDKVSQHDEVIVILGSRSQESASRAQVIAKHKIEN TRLARHTTLANAFIYTPIDTWSMDDVWKLIRACSLEVTISPMGIGKKWADEYGLEWENPWGGKNLTLWNLYKDSSDQGEC PMVIDDSTPSCGNSRFGCWTCTVVTKDRAMESLIQNGEEWMQPLLTFRNKLAETNVPANKDIYRNYKRRQGKVNYQRVKD GQELSEERAHVPGPYWLKYRKEWLTELLVQQREFNKDGYSVTLVTEPELHAIRQEWLNDPNEPDWADSLPKIYREVFGVD LNWVINDNSSFGEVEAQILTDLGEQYNVEPEMVQKLLDLELSLEGLSRRTGVFDKLGTLLRQDWGTLDEIKQRHAQLQSK SDFDIHKDQIDKYEREILELEKQAKVEF
Sequences:
>Translated_588_residues MADLFQADALDDEQLEYIQNEFFAGFKRYKNSDTLPAGLDKYDKLDDSLKHQVSINLCRELLREQKNNEGFPLKHFIDDV QSVYCSDNRPWVIGYSGGKDSSAVVTLIYLALLSLDESKRTKPVYVVASDTLVETPLVVDHVNRSLESIGNNAKKDGLPL TTHKVLPKPHQTFWSCLLGKGYPAPTQSFRWCTERMKIDPVSDFIKDKVSQHDEVIVILGSRSQESASRAQVIAKHKIEN TRLARHTTLANAFIYTPIDTWSMDDVWKLIRACSLEVTISPMGIGKKWADEYGLEWENPWGGKNLTLWNLYKDSSDQGEC PMVIDDSTPSCGNSRFGCWTCTVVTKDRAMESLIQNGEEWMQPLLTFRNKLAETNVPANKDIYRNYKRRQGKVNYQRVKD GQELSEERAHVPGPYWLKYRKEWLTELLVQQREFNKDGYSVTLVTEPELHAIRQEWLNDPNEPDWADSLPKIYREVFGVD LNWVINDNSSFGEVEAQILTDLGEQYNVEPEMVQKLLDLELSLEGLSRRTGVFDKLGTLLRQDWGTLDEIKQRHAQLQSK SDFDIHKDQIDKYEREILELEKQAKVEF >Mature_587_residues ADLFQADALDDEQLEYIQNEFFAGFKRYKNSDTLPAGLDKYDKLDDSLKHQVSINLCRELLREQKNNEGFPLKHFIDDVQ SVYCSDNRPWVIGYSGGKDSSAVVTLIYLALLSLDESKRTKPVYVVASDTLVETPLVVDHVNRSLESIGNNAKKDGLPLT THKVLPKPHQTFWSCLLGKGYPAPTQSFRWCTERMKIDPVSDFIKDKVSQHDEVIVILGSRSQESASRAQVIAKHKIENT RLARHTTLANAFIYTPIDTWSMDDVWKLIRACSLEVTISPMGIGKKWADEYGLEWENPWGGKNLTLWNLYKDSSDQGECP MVIDDSTPSCGNSRFGCWTCTVVTKDRAMESLIQNGEEWMQPLLTFRNKLAETNVPANKDIYRNYKRRQGKVNYQRVKDG QELSEERAHVPGPYWLKYRKEWLTELLVQQREFNKDGYSVTLVTEPELHAIRQEWLNDPNEPDWADSLPKIYREVFGVDL NWVINDNSSFGEVEAQILTDLGEQYNVEPEMVQKLLDLELSLEGLSRRTGVFDKLGTLLRQDWGTLDEIKQRHAQLQSKS DFDIHKDQIDKYEREILELEKQAKVEF
Specific function: Unknown
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67772; Mature: 67641
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLFQADALDDEQLEYIQNEFFAGFKRYKNSDTLPAGLDKYDKLDDSLKHQVSINLCRE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LLREQKNNEGFPLKHFIDDVQSVYCSDNRPWVIGYSGGKDSSAVVTLIYLALLSLDESKR HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCC TKPVYVVASDTLVETPLVVDHVNRSLESIGNNAKKDGLPLTTHKVLPKPHQTFWSCLLGK CCCEEEEECCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCHHHHHHHHHCC GYPAPTQSFRWCTERMKIDPVSDFIKDKVSQHDEVIVILGSRSQESASRAQVIAKHKIEN CCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH TRLARHTTLANAFIYTPIDTWSMDDVWKLIRACSLEVTISPMGIGKKWADEYGLEWENPW HHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCCCCC GGKNLTLWNLYKDSSDQGECPMVIDDSTPSCGNSRFGCWTCTVVTKDRAMESLIQNGEEW CCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHCCHHH MQPLLTFRNKLAETNVPANKDIYRNYKRRQGKVNYQRVKDGQELSEERAHVPGPYWLKYR HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHCCHHHHHHHHCCCCCHHHHHHH KEWLTELLVQQREFNKDGYSVTLVTEPELHAIRQEWLNDPNEPDWADSLPKIYREVFGVD HHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC LNWVINDNSSFGEVEAQILTDLGEQYNVEPEMVQKLLDLELSLEGLSRRTGVFDKLGTLL EEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RQDWGTLDEIKQRHAQLQSKSDFDIHKDQIDKYEREILELEKQAKVEF HHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ADLFQADALDDEQLEYIQNEFFAGFKRYKNSDTLPAGLDKYDKLDDSLKHQVSINLCRE CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LLREQKNNEGFPLKHFIDDVQSVYCSDNRPWVIGYSGGKDSSAVVTLIYLALLSLDESKR HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCC TKPVYVVASDTLVETPLVVDHVNRSLESIGNNAKKDGLPLTTHKVLPKPHQTFWSCLLGK CCCEEEEECCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCHHHHHHHHHCC GYPAPTQSFRWCTERMKIDPVSDFIKDKVSQHDEVIVILGSRSQESASRAQVIAKHKIEN CCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH TRLARHTTLANAFIYTPIDTWSMDDVWKLIRACSLEVTISPMGIGKKWADEYGLEWENPW HHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCCCCC GGKNLTLWNLYKDSSDQGECPMVIDDSTPSCGNSRFGCWTCTVVTKDRAMESLIQNGEEW CCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHCCHHH MQPLLTFRNKLAETNVPANKDIYRNYKRRQGKVNYQRVKDGQELSEERAHVPGPYWLKYR HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHCCHHHHHHHHCCCCCHHHHHHH KEWLTELLVQQREFNKDGYSVTLVTEPELHAIRQEWLNDPNEPDWADSLPKIYREVFGVD HHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC LNWVINDNSSFGEVEAQILTDLGEQYNVEPEMVQKLLDLELSLEGLSRRTGVFDKLGTLL EEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RQDWGTLDEIKQRHAQLQSKSDFDIHKDQIDKYEREILELEKQAKVEF HHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA