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The map label for this gene is ybcL [C]

Identifier: 157962091

GI number: 157962091

Start: 2746961

End: 2747440

Strand: Direct

Name: ybcL [C]

Synonym: Spea_2270

Alternate gene names: 157962091

Gene position: 2746961-2747440 (Clockwise)

Preceding gene: 157962090

Following gene: 157962097

Centisome position: 53.09

GC content: 47.08

Gene sequence:

>480_bases
ATGGCCTTTGCGCTTTGCGATCTTACCGTCACCAGCACCGCTTTTAATCAGCTAGGTTCAATTCCTAAAGCGCACACGGG
AGAGGCAGAAAATACCTCTCCCCAACTCACCTGGACAAATGTTCCTGACGGCTGTAAATCTTTTGCGGTTATCTGTCACG
ATCCCGATGCTCCAAGGGTGAACGCCGATGGTTCATTCGGCTACGTACATTGGCTTGTGTACAATATTCCCTATGGCATT
CACCAACTTGAAGCAAACAACACACTCTATACATCGGGGATAAATGATTTTGGTCTAGGTGGCTACGGTGGCCCTATGCC
ACCCAAAGGCCATGGCATTCATCTATATTACTTCTGGGTTTTAGCGCTAGATGAAGAATTGGATCTGCCCGAAGGACTTA
ACATGCAGGAGTTGTTAGCTAAGATAGAACCTAATTTAATCGGCATGAACCGCTTAGTTGGAAGCTATCAGCGGGACTAG

Upstream 100 bases:

>100_bases
TGAACTCTTTGATGTTAACTAGTGCCTATCACCGGATGCAGACCTTAAGTAAAAGTACTAATATGAGCCTTACAAATAAT
TAGTATGCCGGAGAAATACT

Downstream 100 bases:

>100_bases
AGCTACCGGAGACGTCTTTTAAGAGCTTGCTCTTCTGCTTCTCACGAATAAGTGAAGACGTGGCTAATGAGCCTATACAA
ATTCACTTATCGCGTCCTGT

Product: PEBP family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MAFALCDLTVTSTAFNQLGSIPKAHTGEAENTSPQLTWTNVPDGCKSFAVICHDPDAPRVNADGSFGYVHWLVYNIPYGI
HQLEANNTLYTSGINDFGLGGYGGPMPPKGHGIHLYYFWVLALDEELDLPEGLNMQELLAKIEPNLIGMNRLVGSYQRD

Sequences:

>Translated_159_residues
MAFALCDLTVTSTAFNQLGSIPKAHTGEAENTSPQLTWTNVPDGCKSFAVICHDPDAPRVNADGSFGYVHWLVYNIPYGI
HQLEANNTLYTSGINDFGLGGYGGPMPPKGHGIHLYYFWVLALDEELDLPEGLNMQELLAKIEPNLIGMNRLVGSYQRD
>Mature_158_residues
AFALCDLTVTSTAFNQLGSIPKAHTGEAENTSPQLTWTNVPDGCKSFAVICHDPDAPRVNADGSFGYVHWLVYNIPYGIH
QLEANNTLYTSGINDFGLGGYGGPMPPKGHGIHLYYFWVLALDEELDLPEGLNMQELLAKIEPNLIGMNRLVGSYQRD

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=108, Percent_Identity=47.2222222222222, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1786990, Length=117, Percent_Identity=42.7350427350427, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 17443; Mature: 17312

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFALCDLTVTSTAFNQLGSIPKAHTGEAENTSPQLTWTNVPDGCKSFAVICHDPDAPRV
CEEEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCEE
NADGSFGYVHWLVYNIPYGIHQLEANNTLYTSGINDFGLGGYGGPMPPKGHGIHLYYFWV
CCCCCCCEEEEEEEECCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEE
LALDEELDLPEGLNMQELLAKIEPNLIGMNRLVGSYQRD
EEECCCCCCCCCCCHHHHHHHHCCCEECHHHHHHHCCCC
>Mature Secondary Structure 
AFALCDLTVTSTAFNQLGSIPKAHTGEAENTSPQLTWTNVPDGCKSFAVICHDPDAPRV
EEEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCEE
NADGSFGYVHWLVYNIPYGIHQLEANNTLYTSGINDFGLGGYGGPMPPKGHGIHLYYFWV
CCCCCCCEEEEEEEECCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEE
LALDEELDLPEGLNMQELLAKIEPNLIGMNRLVGSYQRD
EEECCCCCCCCCCCHHHHHHHHCCCEECHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]