Click here to switch to the map view.

The map label for this gene is 157961709

Identifier: 157961709

GI number: 157961709

Start: 2294882

End: 2295772

Strand: Direct

Name: 157961709

Synonym: Spea_1885

Alternate gene names: NA

Gene position: 2294882-2295772 (Clockwise)

Preceding gene: 157961707

Following gene: 157961715

Centisome position: 44.35

GC content: 43.43

Gene sequence:

>891_bases
ATGCCGCGAATTTTCTATTTCTTCCTGCTACTAATCATGTTTTCTACCTCATTCTCATCCTATGCAACGGGGATAATATC
GGTAGCGACTAAAACGCAGCAAACGACTGAAGAGTCGGAACCCCAGTTACCAAAGCAGGAGAGTTTTGACTATAAAGACA
GTCTATTTCGAGATACTCCAAGAGGCACCCTTGCGGGGCTTTTTGAGGCTGCGTTTGAGCAAGACTATGACAAAGCCGCT
AAGTATTTAGATCTACGATATCTCCCAGAAAGCATGGATGCAGAGCTTGGTCCTGAATACGCCAAACAGTTGATTGCAAT
TATTGAGCGTAATATTTGGGTTAATTTACAAGAGGTCGATGATACGCCGAGTGGCCGCAGTAATGACCAACTGCCAAATT
ATCGGGATGCCTTTGGTCGAGTCGAAGTCAAAGGTAGTGAAATCACCTTATTGCTGCAAAAGGTACCCAATAAAGAGTTA
GGCTCTATTTGGAAGATCTCTAATGCAACCATTGCAAAAGTACCTCTGTTATACAGTGAATTGGGCTATGGGCCCGTAGT
CGAATGGTTCGTACAGCACATTCCTCAAGGGCATTTATTCAAGTTAAATCTCTGGGAATGGGCGTTATTGGTTTGCTATC
TAATATTGGCTTTGCTGGTGGTCATTCCTATTACTTGGGTGGCTAAGAAGCTGATATTGCGCAGTGATTATCAGTATAAA
GAAGACGTTGCTCACCTTGTGATTGGACCCGCTCGTCTGCTTATAGCCTTGTTACTCGTAAAAGGTTGGATGGCGCATAC
CACGTTATCGGCAAACGTGATTGAAGTGGTTAATACTGGCGTTTTATTGTTAATCGCGGTGATTTGGTTTATCTGGTCTC
TGGCAATCTAA

Upstream 100 bases:

>100_bases
ATTATCTCAATAATTAGTTTAGTTTTGCGTTAGCAGTTTGTTAAAGTGTAGGCGGTGCAAGCCGTAACCCTAAGGGGACG
TACTTTTGAATGGAGTCTTT

Downstream 100 bases:

>100_bases
TCACATCTATCAAATCTCAATTAATGTTACACGTGTTGCCAGTAAAGGGTTTTACTGGTGTAACAAAAATATGACTTAAA
CTCATTGTCTCTCCATTCAT

Product: mechanosensitive ion channel protein MscS

Products: NA

Alternate protein names: Small-Conductance Mechanosensitive Channel; Mechanosensitive Ion Channel MscS; Mechanosensitive Ion Channel Family Protein; Transporter MscS Family; Mechanosensitive Channel Protein; Mechanosensitive Ion Channel Protein MscS; Small Conductance Mechanosensitive Ion Channel

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MPRIFYFFLLLIMFSTSFSSYATGIISVATKTQQTTEESEPQLPKQESFDYKDSLFRDTPRGTLAGLFEAAFEQDYDKAA
KYLDLRYLPESMDAELGPEYAKQLIAIIERNIWVNLQEVDDTPSGRSNDQLPNYRDAFGRVEVKGSEITLLLQKVPNKEL
GSIWKISNATIAKVPLLYSELGYGPVVEWFVQHIPQGHLFKLNLWEWALLVCYLILALLVVIPITWVAKKLILRSDYQYK
EDVAHLVIGPARLLIALLLVKGWMAHTTLSANVIEVVNTGVLLLIAVIWFIWSLAI

Sequences:

>Translated_296_residues
MPRIFYFFLLLIMFSTSFSSYATGIISVATKTQQTTEESEPQLPKQESFDYKDSLFRDTPRGTLAGLFEAAFEQDYDKAA
KYLDLRYLPESMDAELGPEYAKQLIAIIERNIWVNLQEVDDTPSGRSNDQLPNYRDAFGRVEVKGSEITLLLQKVPNKEL
GSIWKISNATIAKVPLLYSELGYGPVVEWFVQHIPQGHLFKLNLWEWALLVCYLILALLVVIPITWVAKKLILRSDYQYK
EDVAHLVIGPARLLIALLLVKGWMAHTTLSANVIEVVNTGVLLLIAVIWFIWSLAI
>Mature_295_residues
PRIFYFFLLLIMFSTSFSSYATGIISVATKTQQTTEESEPQLPKQESFDYKDSLFRDTPRGTLAGLFEAAFEQDYDKAAK
YLDLRYLPESMDAELGPEYAKQLIAIIERNIWVNLQEVDDTPSGRSNDQLPNYRDAFGRVEVKGSEITLLLQKVPNKELG
SIWKISNATIAKVPLLYSELGYGPVVEWFVQHIPQGHLFKLNLWEWALLVCYLILALLVVIPITWVAKKLILRSDYQYKE
DVAHLVIGPARLLIALLLVKGWMAHTTLSANVIEVVNTGVLLLIAVIWFIWSLAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33672; Mature: 33540

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRIFYFFLLLIMFSTSFSSYATGIISVATKTQQTTEESEPQLPKQESFDYKDSLFRDTP
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCC
RGTLAGLFEAAFEQDYDKAAKYLDLRYLPESMDAELGPEYAKQLIAIIERNIWVNLQEVD
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECC
DTPSGRSNDQLPNYRDAFGRVEVKGSEITLLLQKVPNKELGSIWKISNATIAKVPLLYSE
CCCCCCCCCCCCCHHHHCCEEEECCCCEEEHHHHCCCCHHCCEEEECCCHHHHHHHHHHH
LGYGPVVEWFVQHIPQGHLFKLNLWEWALLVCYLILALLVVIPITWVAKKLILRSDYQYK
CCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EDVAHLVIGPARLLIALLLVKGWMAHTTLSANVIEVVNTGVLLLIAVIWFIWSLAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PRIFYFFLLLIMFSTSFSSYATGIISVATKTQQTTEESEPQLPKQESFDYKDSLFRDTP
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCC
RGTLAGLFEAAFEQDYDKAAKYLDLRYLPESMDAELGPEYAKQLIAIIERNIWVNLQEVD
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECC
DTPSGRSNDQLPNYRDAFGRVEVKGSEITLLLQKVPNKELGSIWKISNATIAKVPLLYSE
CCCCCCCCCCCCCHHHHCCEEEECCCCEEEHHHHCCCCHHCCEEEECCCHHHHHHHHHHH
LGYGPVVEWFVQHIPQGHLFKLNLWEWALLVCYLILALLVVIPITWVAKKLILRSDYQYK
CCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EDVAHLVIGPARLLIALLLVKGWMAHTTLSANVIEVVNTGVLLLIAVIWFIWSLAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA