| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is csgE [C]
Identifier: 157961642
GI number: 157961642
Start: 2221171
End: 2221632
Strand: Direct
Name: csgE [C]
Synonym: Spea_1818
Alternate gene names: 157961642
Gene position: 2221171-2221632 (Clockwise)
Preceding gene: 157961641
Following gene: 157961643
Centisome position: 42.92
GC content: 43.94
Gene sequence:
>462_bases GTGAAGCGCTTGTATCTAAGCTTACTACTCTTTTTGCAACCCGCAGCAGCAGAGGAGATTGTATTAGATAAGCAGTCTCC TCCTGCAGCTAAAAATACCAGCGATATTCCCCCGAAAGTCGAAACTGACCTGATTGATGGGCTGATCCTTAATAGAGCCA TGACCCGTTTTGGCCACAGATTTTACCGTGAGTTTGTCGCGGCTTATCGAGATATCGGAGGCGTAGTTGAGCATTCAGGC CTGACGATAGTTGAGCAAGCCACTGCAAGAAGTGGCAGTAAAATTAGTATATTACATAATAGAAAGCCTATTTATATTAC GGTTGTATCACCTGCAAGTCGTAATATTGACGACCAAGCTTTAGCAGCCGCTAGTCGCGTTAATCAAAAATTGAAACAAA ATCAGAGGCAAGCAAGCTGGAGCCAATTCCTCGATCCAGATTTAGCTCCAGACGAGTTTTAA
Upstream 100 bases:
>100_bases CCATCAAAACCCATCTTTATAGAGCCTTTAGAAAGATTGGAGTCTCTAGCCGAGGACAAGCAATTGCCTGGGCGCAGACT AACCTACATGAAGTGACTCA
Downstream 100 bases:
>100_bases CAAGGAATGTTCATGAAAATAATAAAAAATGTCGTTATAGGACTAGCTGTTACAGCAGGTGGCGCCCAGGCAACTCAATT GACTTATACCCCCGTCAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MKRLYLSLLLFLQPAAAEEIVLDKQSPPAAKNTSDIPPKVETDLIDGLILNRAMTRFGHRFYREFVAAYRDIGGVVEHSG LTIVEQATARSGSKISILHNRKPIYITVVSPASRNIDDQALAAASRVNQKLKQNQRQASWSQFLDPDLAPDEF
Sequences:
>Translated_153_residues MKRLYLSLLLFLQPAAAEEIVLDKQSPPAAKNTSDIPPKVETDLIDGLILNRAMTRFGHRFYREFVAAYRDIGGVVEHSG LTIVEQATARSGSKISILHNRKPIYITVVSPASRNIDDQALAAASRVNQKLKQNQRQASWSQFLDPDLAPDEF >Mature_153_residues MKRLYLSLLLFLQPAAAEEIVLDKQSPPAAKNTSDIPPKVETDLIDGLILNRAMTRFGHRFYREFVAAYRDIGGVVEHSG LTIVEQATARSGSKISILHNRKPIYITVVSPASRNIDDQALAAASRVNQKLKQNQRQASWSQFLDPDLAPDEF
Specific function: May Be Involved In The Biogenesis Of Curli Organelles. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17074; Mature: 17074
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLYLSLLLFLQPAAAEEIVLDKQSPPAAKNTSDIPPKVETDLIDGLILNRAMTRFGHR CHHHHHHHHHHHCCCCHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FYREFVAAYRDIGGVVEHSGLTIVEQATARSGSKISILHNRKPIYITVVSPASRNIDDQA HHHHHHHHHHHHCCHHHCCCCEEEEHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCHHH LAAASRVNQKLKQNQRQASWSQFLDPDLAPDEF HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKRLYLSLLLFLQPAAAEEIVLDKQSPPAAKNTSDIPPKVETDLIDGLILNRAMTRFGHR CHHHHHHHHHHHCCCCHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FYREFVAAYRDIGGVVEHSGLTIVEQATARSGSKISILHNRKPIYITVVSPASRNIDDQA HHHHHHHHHHHHCCHHHCCCCEEEEHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCHHH LAAASRVNQKLKQNQRQASWSQFLDPDLAPDEF HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA