Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is sacIM [H]
Identifier: 157961098
GI number: 157961098
Start: 1546309
End: 1547529
Strand: Direct
Name: sacIM [H]
Synonym: Spea_1270
Alternate gene names: 157961098
Gene position: 1546309-1547529 (Clockwise)
Preceding gene: 157961097
Following gene: 157961099
Centisome position: 29.88
GC content: 42.42
Gene sequence:
>1221_bases ATGATCTCGCTTTTTAGTGGCGCTGGTGGACTAGATATTGGTTTATGTGAGGCCGGGTTTACTAATAGGCTCAGTGTAGA AATTGATGAAGATGCACAAAAAACACTTAAATTGAACCAACCATCGTTGAAGTTGGCAACACCAGGAGATATTCATAAAT TAACTCCTAGTGAGTTACTGAGACAGTCAGGATTACAGCCTAAAGAGCTTACTTTATTAGCTGGTGGACCTCCATGCCAA CCATTTTCTAAGTCTGGTTACTGGGCTAAAGGGGATACTGACCGATTAACAGACCCTAGGGCTGAAACACTAACTGCATA CCTTGATATCGTGAAGGTGGCATTGCCTCAAGTGCTTCTGTTAGAAAATGTAAAAGGCATTGCTTATTCAGATAAAGATG AAGGTTTACAGCTACTCATTACAGAGCTAAACAACATAAATAGTGAAATGAATACTAGCTATATGCCTGAAGTCATCACT GTCAATGCTTCAAGTTATGGTGTTCCACAACATAGAGAACGAGTATTCATTGTTGCTAATAGGGATGGAGGTACTTTCAA GATGCCTTCGCCTACTCATAGTGACAGTAAAGATCCAACCTTGAAAAATACTTTGCGGTGTACAACTGCTTGGGATTCTA TTGGTGACTTGGATGTTGAACCGTGGCCTGAAGATATCAAACCTAAAGGAAAATGGGCCGATCTATTACCTACCATTCCT GAAGGGCAAAATTATCTTTGGCATACGGATCGATTTGGGGGCAGTCCGTTGTTTGGTTGGCGAACTCGGTTCTGGTCATT TTTACTAAAGCTAGCAAAAAATCAACCAAGTTGGACCATTCAGGCACAGCCAGGTCCTGCTACGGGACCATTTCACTGGA AAGGTCGTTTATTGTCTATTAGGGAATTAGCCCGTTTACAGACATTTCCCGATTCGTACCAGTTTGTAGGTGATCGACGC TCTGCTCAGAAACAGATTGGAAATGCTGTCCCACCAGCAATGGGTGAGTTATTTGGCTTAGAAATCAGGCGCCAGTTTTT TGGTGAACAAGTACGTAGAAAACTCAGATTAATTCCTGAGGGAAGAGAAGATTGTCCTGTCCCTGAAGTTCCCAAACAGG TGCCTGAAAAGTTCTTAGAAATGGTAGGTAGTCATAAGGCCCATCCCGGAACAGGAAAGGGACCTGGAGCGGTTTTAAGA AATACAAATAACGTAGTCTAG
Upstream 100 bases:
>100_bases GTTGTGAAGCACTAAAATAACCCCCGATAGTAATTTAGTCAGAGTCTTTGAGGTGATAGTTTGAGTGGTGCCGTAAGTGC TTAATAATAGAAAGAAAACA
Downstream 100 bases:
>100_bases ATTTATAGTCCGAAACCTTTCTAATTAAGGAACTGTGAGTGACATCGCACATAATTATTACAACAGGAACATTACTTCGT GAACTCTCTCGCTTCCGACT
Product: DNA-cytosine methyltransferase
Products: NA
Alternate protein names: M.SacI; Cytosine-specific methyltransferase SacI [H]
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MISLFSGAGGLDIGLCEAGFTNRLSVEIDEDAQKTLKLNQPSLKLATPGDIHKLTPSELLRQSGLQPKELTLLAGGPPCQ PFSKSGYWAKGDTDRLTDPRAETLTAYLDIVKVALPQVLLLENVKGIAYSDKDEGLQLLITELNNINSEMNTSYMPEVIT VNASSYGVPQHRERVFIVANRDGGTFKMPSPTHSDSKDPTLKNTLRCTTAWDSIGDLDVEPWPEDIKPKGKWADLLPTIP EGQNYLWHTDRFGGSPLFGWRTRFWSFLLKLAKNQPSWTIQAQPGPATGPFHWKGRLLSIRELARLQTFPDSYQFVGDRR SAQKQIGNAVPPAMGELFGLEIRRQFFGEQVRRKLRLIPEGREDCPVPEVPKQVPEKFLEMVGSHKAHPGTGKGPGAVLR NTNNVV
Sequences:
>Translated_406_residues MISLFSGAGGLDIGLCEAGFTNRLSVEIDEDAQKTLKLNQPSLKLATPGDIHKLTPSELLRQSGLQPKELTLLAGGPPCQ PFSKSGYWAKGDTDRLTDPRAETLTAYLDIVKVALPQVLLLENVKGIAYSDKDEGLQLLITELNNINSEMNTSYMPEVIT VNASSYGVPQHRERVFIVANRDGGTFKMPSPTHSDSKDPTLKNTLRCTTAWDSIGDLDVEPWPEDIKPKGKWADLLPTIP EGQNYLWHTDRFGGSPLFGWRTRFWSFLLKLAKNQPSWTIQAQPGPATGPFHWKGRLLSIRELARLQTFPDSYQFVGDRR SAQKQIGNAVPPAMGELFGLEIRRQFFGEQVRRKLRLIPEGREDCPVPEVPKQVPEKFLEMVGSHKAHPGTGKGPGAVLR NTNNVV >Mature_406_residues MISLFSGAGGLDIGLCEAGFTNRLSVEIDEDAQKTLKLNQPSLKLATPGDIHKLTPSELLRQSGLQPKELTLLAGGPPCQ PFSKSGYWAKGDTDRLTDPRAETLTAYLDIVKVALPQVLLLENVKGIAYSDKDEGLQLLITELNNINSEMNTSYMPEVIT VNASSYGVPQHRERVFIVANRDGGTFKMPSPTHSDSKDPTLKNTLRCTTAWDSIGDLDVEPWPEDIKPKGKWADLLPTIP EGQNYLWHTDRFGGSPLFGWRTRFWSFLLKLAKNQPSWTIQAQPGPATGPFHWKGRLLSIRELARLQTFPDSYQFVGDRR SAQKQIGNAVPPAMGELFGLEIRRQFFGEQVRRKLRLIPEGREDCPVPEVPKQVPEKFLEMVGSHKAHPGTGKGPGAVLR NTNNVV
Specific function: This methylase recognizes the double-stranded sequence GAGCTC, causes specific methylation on C-4 on both strands, and protects the DNA from cleavage by the SacI endonuclease [H]
COG id: COG0270
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C5-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001525 [H]
Pfam domain/function: PF00145 DNA_methylase [H]
EC number: =2.1.1.37 [H]
Molecular weight: Translated: 45072; Mature: 45072
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLFSGAGGLDIGLCEAGFTNRLSVEIDEDAQKTLKLNQPSLKLATPGDIHKLTPSELL CEEEECCCCCCEEEEECCCCCCEEEEEECCCHHHHEECCCCCEEECCCCCCCCCCHHHHH RQSGLQPKELTLLAGGPPCQPFSKSGYWAKGDTDRLTDPRAETLTAYLDIVKVALPQVLL HHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LENVKGIAYSDKDEGLQLLITELNNINSEMNTSYMPEVITVNASSYGVPQHRERVFIVAN HHCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEE RDGGTFKMPSPTHSDSKDPTLKNTLRCTTAWDSIGDLDVEPWPEDIKPKGKWADLLPTIP CCCCEEECCCCCCCCCCCCCHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC EGQNYLWHTDRFGGSPLFGWRTRFWSFLLKLAKNQPSWTIQAQPGPATGPFHWKGRLLSI CCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHH RELARLQTFPDSYQFVGDRRSAQKQIGNAVPPAMGELFGLEIRRQFFGEQVRRKLRLIPE HHHHHHHCCCCHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GREDCPVPEVPKQVPEKFLEMVGSHKAHPGTGKGPGAVLRNTNNVV CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCC >Mature Secondary Structure MISLFSGAGGLDIGLCEAGFTNRLSVEIDEDAQKTLKLNQPSLKLATPGDIHKLTPSELL CEEEECCCCCCEEEEECCCCCCEEEEEECCCHHHHEECCCCCEEECCCCCCCCCCHHHHH RQSGLQPKELTLLAGGPPCQPFSKSGYWAKGDTDRLTDPRAETLTAYLDIVKVALPQVLL HHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LENVKGIAYSDKDEGLQLLITELNNINSEMNTSYMPEVITVNASSYGVPQHRERVFIVAN HHCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEE RDGGTFKMPSPTHSDSKDPTLKNTLRCTTAWDSIGDLDVEPWPEDIKPKGKWADLLPTIP CCCCEEECCCCCCCCCCCCCHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC EGQNYLWHTDRFGGSPLFGWRTRFWSFLLKLAKNQPSWTIQAQPGPATGPFHWKGRLLSI CCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHH RELARLQTFPDSYQFVGDRRSAQKQIGNAVPPAMGELFGLEIRRQFFGEQVRRKLRLIPE HHHHHHHCCCCHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GREDCPVPEVPKQVPEKFLEMVGSHKAHPGTGKGPGAVLRNTNNVV CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9862476 [H]