Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is fepA [C]
Identifier: 157960925
GI number: 157960925
Start: 1325416
End: 1328025
Strand: Direct
Name: fepA [C]
Synonym: Spea_1097
Alternate gene names: 157960925
Gene position: 1325416-1328025 (Clockwise)
Preceding gene: 157960923
Following gene: 157960926
Centisome position: 25.61
GC content: 45.25
Gene sequence:
>2610_bases ATGCGACCATTAACCTTTAAGAAAAGTGTACTAGCTACAAATATCGCACTGCTGATGAGCGGGGCTTTGTCTGTTTCTGC TATGGCGGCAGAGGCTGATGCGAAAGCTGCAGCAGCAGACGAAAACATTGAGAAGATTGAAGTGCGCGGCATGCGAGCCT CAATGAAAGCCTCAATCAATGCCAAAAGATTCTCTGATTCAGTGGTTGATGCCGTAACTGCTGAAGATATTGGTAAGTTT CCCGATGGTGATGTAGGTGAATCACTAGGCCGTATTCCGGGTGTTGCCGTTAACCGTCAGTTTGGCCAAGGCCAGCAGGT TTCTATTCGAGGAGCATCGAGCCAGCTGACTCGAACTTTGCTTAATGGCCATTCAGTAGCATCGACGGGTTGGTACGACC AACAGGCCATCGACCGTAGCTTTAACTACTCTCTACTTCCGCCTGAAATGGTAGGCGCAATCGAAGTTTATAAGTCATCA CAAGCGGATATTCCTGAAGGTGGTATCGGTGGTACGGTAATCGTTAAGACCCGTAAGCCACTAGACTTGGATGCAAACTC AGTATTTATCAGCGCTAAAGGCGACTATGGCACAATCTCTGAAGAGGTCGATCCTGAGCTTTCTGGTTTATACAGCTGGA AAAATGAAGATGAAAACTTCGGTTTCCTACTTTCAGCTGCAGCTTCAGAAACTAACTACCAGCGTAACGGAATTGAATCG CTAGTCGGTTGGGGGGATATCGTTCCTACAACGTTTGAGCAAGAGCGTGAGCGCACAGCAATTAACGGTGCATTACAATA CCGCCCGACAGATAACCTAGAGTTTGGCTTGAATATCATGACGCTTGATATGAAAGCTAATAACGCCAATACCTCACTGT TTACCATGTTCCCTGATGATAAAGAAGCGGCTTGTGAGCAAACTAACGCATCGGGCACTTGTACCTTCTATCGTCGCGAT GGCAAGGGCGAGAACCCAGGTTGGGCGCAAACTTGGGCTCGTAAAGCGAGCATGGATTCAAATACTTATGATTTGGATTT CAAATATGAAGCGGACAGCTACACCTTAGAAGGCCGAGTGGGTAACACTAAGTCTGAAGGTGGTACTGATATGACGGCTA ACTACGGTTTCTGGTTAGGTCAGCCTGGTGATTATGCCGGAACTTATGATGCGACCGGTGAGCAGATAAAAATCGATATC GCCAATAAGTCATTTGACGCAGGAGATTTTGGTGGCCCACTTTCTCCGGCAGGTTGGTCTCTTAAGAAGCAGCCAAATTC AGATGAAGAGACTTACGCACAGTTCGACGTGACAGTCCCTGTTGATCTAGGCGCTATCACCTCATTTAAGACTGGTGTTC GTTGGGCAGACCATGACGTAAAGCAGGAAACTTTCCCCGCTATTGTTAACGCCGATGTGACGGCTAAAGATGCATCAGCT TACTATTCAGGAACAGTTTCTTCTGGTGCAGGCTTTACTCTACCTAAGCCAAACCTCGATGCAATGCTTGCAGATGCAAA CGCGGCAATTAGTGGCTTTAGCAAAGAAGGTACTGTTTATAAGTCTGGTTACGGCACCATTACCGAAGAGAACTTAGCGC TATATTTAATGGCTAACTTCGAGTCAGATGGTGTTCGCGGTAACTTTGGTCTACGTTATATCTCAACCGATGCCTCTTCT GATTACTATAAGCTACAATCTGACGGTACTTATGCAGATAACTTGAGTACAAGAGATGCTAGCTACAATGATGTGTTACC AAGCGTAAACGTTGCCTTTGATGTTGCACCAGATGTGATTATCCGTACTTCGGCATCACAAGTTATCTCTCGTCCTAACT ATGGCGATATGTTCGCCTCTTCTGCGCTAGCCGGTTATAACGACGGCACAGCGGGCAATGAAGTGGTTAATACGGGTAAT ATTGCACTAGAACCATTTAAAGCAACACAAGCAGATTTGGGTGTTGAATGGTACTTCAGCCCAGATGGTCTAGTTGCTGC AACATATTTCATTAAAGATATCAGCTCATTCGTTACTTCAAATCAAATCTTAGATCAAAGCATCGGTATTATTGACCCTG ATTCTGGTGAAGATAGCTGGACTAAGTCGACTAAGAAGAATGGTACTGGTGGTCAAATTCAAGGTGTCGAGCTTCAATTG CAAGATTCATTTGAAAACGGCCTAGGCTACTCAGCTAACTATACTTTTGCAGATTCAGATGCACCTGCTGATAACTATCC GGATGAAGTGAGTGTATTCTCTGATTCATCTAAGCATACAGTTAACCTAGTGGGTTACTACGAGATGGAAGACTTTTCTG CTCGTGTAGCTTATAACTGGCGCAGTGAATACATGATCCGTGAGCTTCCAGGTTTCTACGGCAACCGTGAGCACCAAGAC TATGGAACTGTTGATTTAAGTGCTAACTACAACATTACTGATTACCTATCTGTGACTTTCGAAGTAGTTAATCTACTTGA AGAAGATAGCGTACAGCTTGGTGTCGCTCCAGATTCTGCTGAAGTAAAGCCAGAGCTTAAGGATGGTTACCCAGCATGGA GCTTCGAAGGTGAAGCGCGTTATAAGCTAGGTGTTGCATTACGCTTCTAA
Upstream 100 bases:
>100_bases AATTGTGTAATGTTTGCCCTAGACATGACAGCGTTGTCATTCCGCTTCTGGAATGGTTATGGATATAAAAAAAGATAATA AGTTATGGAAGGGAAACGAG
Downstream 100 bases:
>100_bases GCAAATAGAAAAATGAGTACAAGATAAAGCCCAGCATTTGCTGGGCTTTTTATTGAAAAGATAAAATCAGTTAAAGCTAA TTAAACGCTGTGATTCCGGT
Product: TonB-dependent receptor
Products: NA
Alternate protein names: Nb-Dependent Receptor; NB-Dependent Receptor Plug; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Subfamily; NB-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Subfamily Protein; Outer Membrane Protein; NB-Dependent Receptor-Like Protein; Nucleoside Diphosphate Kinase; Crossover Junction Endodeoxyribonuclease RuvC; NB Dependent Receptor For Iron Chelates; 50S Ribosomal Protein L; NB-Dependent Outer Membrane Ferripyoverdine Receptor; 3-Dehydroquinate Synthase; Peptidase; NB Dependent Receptor Protein; Outer Membrane Receptor Family Protein; Argininosuccinate Synthase; NB-Dependent Receptor Domain Protein
Number of amino acids: Translated: 869; Mature: 869
Protein sequence:
>869_residues MRPLTFKKSVLATNIALLMSGALSVSAMAAEADAKAAAADENIEKIEVRGMRASMKASINAKRFSDSVVDAVTAEDIGKF PDGDVGESLGRIPGVAVNRQFGQGQQVSIRGASSQLTRTLLNGHSVASTGWYDQQAIDRSFNYSLLPPEMVGAIEVYKSS QADIPEGGIGGTVIVKTRKPLDLDANSVFISAKGDYGTISEEVDPELSGLYSWKNEDENFGFLLSAAASETNYQRNGIES LVGWGDIVPTTFEQERERTAINGALQYRPTDNLEFGLNIMTLDMKANNANTSLFTMFPDDKEAACEQTNASGTCTFYRRD GKGENPGWAQTWARKASMDSNTYDLDFKYEADSYTLEGRVGNTKSEGGTDMTANYGFWLGQPGDYAGTYDATGEQIKIDI ANKSFDAGDFGGPLSPAGWSLKKQPNSDEETYAQFDVTVPVDLGAITSFKTGVRWADHDVKQETFPAIVNADVTAKDASA YYSGTVSSGAGFTLPKPNLDAMLADANAAISGFSKEGTVYKSGYGTITEENLALYLMANFESDGVRGNFGLRYISTDASS DYYKLQSDGTYADNLSTRDASYNDVLPSVNVAFDVAPDVIIRTSASQVISRPNYGDMFASSALAGYNDGTAGNEVVNTGN IALEPFKATQADLGVEWYFSPDGLVAATYFIKDISSFVTSNQILDQSIGIIDPDSGEDSWTKSTKKNGTGGQIQGVELQL QDSFENGLGYSANYTFADSDAPADNYPDEVSVFSDSSKHTVNLVGYYEMEDFSARVAYNWRSEYMIRELPGFYGNREHQD YGTVDLSANYNITDYLSVTFEVVNLLEEDSVQLGVAPDSAEVKPELKDGYPAWSFEGEARYKLGVALRF
Sequences:
>Translated_869_residues MRPLTFKKSVLATNIALLMSGALSVSAMAAEADAKAAAADENIEKIEVRGMRASMKASINAKRFSDSVVDAVTAEDIGKF PDGDVGESLGRIPGVAVNRQFGQGQQVSIRGASSQLTRTLLNGHSVASTGWYDQQAIDRSFNYSLLPPEMVGAIEVYKSS QADIPEGGIGGTVIVKTRKPLDLDANSVFISAKGDYGTISEEVDPELSGLYSWKNEDENFGFLLSAAASETNYQRNGIES LVGWGDIVPTTFEQERERTAINGALQYRPTDNLEFGLNIMTLDMKANNANTSLFTMFPDDKEAACEQTNASGTCTFYRRD GKGENPGWAQTWARKASMDSNTYDLDFKYEADSYTLEGRVGNTKSEGGTDMTANYGFWLGQPGDYAGTYDATGEQIKIDI ANKSFDAGDFGGPLSPAGWSLKKQPNSDEETYAQFDVTVPVDLGAITSFKTGVRWADHDVKQETFPAIVNADVTAKDASA YYSGTVSSGAGFTLPKPNLDAMLADANAAISGFSKEGTVYKSGYGTITEENLALYLMANFESDGVRGNFGLRYISTDASS DYYKLQSDGTYADNLSTRDASYNDVLPSVNVAFDVAPDVIIRTSASQVISRPNYGDMFASSALAGYNDGTAGNEVVNTGN IALEPFKATQADLGVEWYFSPDGLVAATYFIKDISSFVTSNQILDQSIGIIDPDSGEDSWTKSTKKNGTGGQIQGVELQL QDSFENGLGYSANYTFADSDAPADNYPDEVSVFSDSSKHTVNLVGYYEMEDFSARVAYNWRSEYMIRELPGFYGNREHQD YGTVDLSANYNITDYLSVTFEVVNLLEEDSVQLGVAPDSAEVKPELKDGYPAWSFEGEARYKLGVALRF >Mature_869_residues MRPLTFKKSVLATNIALLMSGALSVSAMAAEADAKAAAADENIEKIEVRGMRASMKASINAKRFSDSVVDAVTAEDIGKF PDGDVGESLGRIPGVAVNRQFGQGQQVSIRGASSQLTRTLLNGHSVASTGWYDQQAIDRSFNYSLLPPEMVGAIEVYKSS QADIPEGGIGGTVIVKTRKPLDLDANSVFISAKGDYGTISEEVDPELSGLYSWKNEDENFGFLLSAAASETNYQRNGIES LVGWGDIVPTTFEQERERTAINGALQYRPTDNLEFGLNIMTLDMKANNANTSLFTMFPDDKEAACEQTNASGTCTFYRRD GKGENPGWAQTWARKASMDSNTYDLDFKYEADSYTLEGRVGNTKSEGGTDMTANYGFWLGQPGDYAGTYDATGEQIKIDI ANKSFDAGDFGGPLSPAGWSLKKQPNSDEETYAQFDVTVPVDLGAITSFKTGVRWADHDVKQETFPAIVNADVTAKDASA YYSGTVSSGAGFTLPKPNLDAMLADANAAISGFSKEGTVYKSGYGTITEENLALYLMANFESDGVRGNFGLRYISTDASS DYYKLQSDGTYADNLSTRDASYNDVLPSVNVAFDVAPDVIIRTSASQVISRPNYGDMFASSALAGYNDGTAGNEVVNTGN IALEPFKATQADLGVEWYFSPDGLVAATYFIKDISSFVTSNQILDQSIGIIDPDSGEDSWTKSTKKNGTGGQIQGVELQL QDSFENGLGYSANYTFADSDAPADNYPDEVSVFSDSSKHTVNLVGYYEMEDFSARVAYNWRSEYMIRELPGFYGNREHQD YGTVDLSANYNITDYLSVTFEVVNLLEEDSVQLGVAPDSAEVKPELKDGYPAWSFEGEARYKLGVALRF
Specific function: This Protein Is Involved In The Initial Step Of Iron Uptake By Binding Ferrienterobactin (Fe-Ent), An Iron Chelatin Siderophore That Allows E.Coli To Extract Iron From The Environment. Fepa Also Acts As A Receptor For Colicins B And D. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94157; Mature: 94157
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPLTFKKSVLATNIALLMSGALSVSAMAAEADAKAAAADENIEKIEVRGMRASMKASIN CCCCCCCHHHHHHHHHHHHHCCHHEEEHHHCCCCHHHHCCCCCEEEEEECCCCHHHHCCC AKRFSDSVVDAVTAEDIGKFPDGDVGESLGRIPGVAVNRQFGQGQQVSIRGASSQLTRTL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEECCCCCCCEEEEECCHHHHHHHH LNGHSVASTGWYDQQAIDRSFNYSLLPPEMVGAIEVYKSSQADIPEGGIGGTVIVKTRKP HCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCEEEEEECCC LDLDANSVFISAKGDYGTISEEVDPELSGLYSWKNEDENFGFLLSAAASETNYQRNGIES CCCCCCEEEEEECCCCCCCCHHCCCHHHHEECCCCCCCCCEEEEEECCCCCCCHHHHHHH LVGWGDIVPTTFEQERERTAINGALQYRPTDNLEFGLNIMTLDMKANNANTSLFTMFPDD HHCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCEECEEEEEEEEECCCCCCEEEEECCCC KEAACEQTNASGTCTFYRRDGKGENPGWAQTWARKASMDSNTYDLDFKYEADSYTLEGRV HHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCEEEECCC GNTKSEGGTDMTANYGFWLGQPGDYAGTYDATGEQIKIDIANKSFDAGDFGGPLSPAGWS CCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC LKKQPNSDEETYAQFDVTVPVDLGAITSFKTGVRWADHDVKQETFPAIVNADVTAKDASA CCCCCCCCCCEEEEEEEEEEECCCCHHHHHCCCEECCCCCCHHHCCEEECCCCEECCCCC YYSGTVSSGAGFTLPKPNLDAMLADANAAISGFSKEGTVYKSGYGTITEENLALYLMANF EECCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCEEECCCCCEEECCEEEEEEEEC ESDGVRGNFGLRYISTDASSDYYKLQSDGTYADNLSTRDASYNDVLPSVNVAFDVAPDVI CCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCEE IRTSASQVISRPNYGDMFASSALAGYNDGTAGNEVVNTGNIALEPFKATQADLGVEWYFS EECCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCEEEECCCCCCCCCCEEEEEC PDGLVAATYFIKDISSFVTSNQILDQSIGIIDPDSGEDSWTKSTKKNGTGGQIQGVELQL CCCCEEHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHCCCCCCCCCEEEEEEEEE QDSFENGLGYSANYTFADSDAPADNYPDEVSVFSDSSKHTVNLVGYYEMEDFSARVAYNW ECCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCEEEEEEC RSEYMIRELPGFYGNREHQDYGTVDLSANYNITDYLSVTFEVVNLLEEDSVQLGVAPDSA CHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCC EVKPELKDGYPAWSFEGEARYKLGVALRF CCCCHHHCCCCCCCCCCCCEEEEEEEEEC >Mature Secondary Structure MRPLTFKKSVLATNIALLMSGALSVSAMAAEADAKAAAADENIEKIEVRGMRASMKASIN CCCCCCCHHHHHHHHHHHHHCCHHEEEHHHCCCCHHHHCCCCCEEEEEECCCCHHHHCCC AKRFSDSVVDAVTAEDIGKFPDGDVGESLGRIPGVAVNRQFGQGQQVSIRGASSQLTRTL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEECCCCCCCEEEEECCHHHHHHHH LNGHSVASTGWYDQQAIDRSFNYSLLPPEMVGAIEVYKSSQADIPEGGIGGTVIVKTRKP HCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCEEEEEECCC LDLDANSVFISAKGDYGTISEEVDPELSGLYSWKNEDENFGFLLSAAASETNYQRNGIES CCCCCCEEEEEECCCCCCCCHHCCCHHHHEECCCCCCCCCEEEEEECCCCCCCHHHHHHH LVGWGDIVPTTFEQERERTAINGALQYRPTDNLEFGLNIMTLDMKANNANTSLFTMFPDD HHCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCEECEEEEEEEEECCCCCCEEEEECCCC KEAACEQTNASGTCTFYRRDGKGENPGWAQTWARKASMDSNTYDLDFKYEADSYTLEGRV HHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCEEEECCC GNTKSEGGTDMTANYGFWLGQPGDYAGTYDATGEQIKIDIANKSFDAGDFGGPLSPAGWS CCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC LKKQPNSDEETYAQFDVTVPVDLGAITSFKTGVRWADHDVKQETFPAIVNADVTAKDASA CCCCCCCCCCEEEEEEEEEEECCCCHHHHHCCCEECCCCCCHHHCCEEECCCCEECCCCC YYSGTVSSGAGFTLPKPNLDAMLADANAAISGFSKEGTVYKSGYGTITEENLALYLMANF EECCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCEEECCCCCEEECCEEEEEEEEC ESDGVRGNFGLRYISTDASSDYYKLQSDGTYADNLSTRDASYNDVLPSVNVAFDVAPDVI CCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCEE IRTSASQVISRPNYGDMFASSALAGYNDGTAGNEVVNTGNIALEPFKATQADLGVEWYFS EECCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCEEEECCCCCCCCCCEEEEEC PDGLVAATYFIKDISSFVTSNQILDQSIGIIDPDSGEDSWTKSTKKNGTGGQIQGVELQL CCCCEEHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHCCCCCCCCCEEEEEEEEE QDSFENGLGYSANYTFADSDAPADNYPDEVSVFSDSSKHTVNLVGYYEMEDFSARVAYNW ECCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCEEEEEEC RSEYMIRELPGFYGNREHQDYGTVDLSANYNITDYLSVTFEVVNLLEEDSVQLGVAPDSA CHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCC EVKPELKDGYPAWSFEGEARYKLGVALRF CCCCHHHCCCCCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA