Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157960915
Identifier: 157960915
GI number: 157960915
Start: 1315749
End: 1316309
Strand: Direct
Name: 157960915
Synonym: Spea_1087
Alternate gene names: NA
Gene position: 1315749-1316309 (Clockwise)
Preceding gene: 157960914
Following gene: 157960916
Centisome position: 25.43
GC content: 41.35
Gene sequence:
>561_bases ATGAACACCAAAGAGAAAGGACTTTCATTGATTGAAGTGTTAGTTGCTTTGGTTATTTTGACCGTCGGCTTGATCGGCGT TTTCAATCTTCATGTGATCTCTAAGCGCGGTAGTTTCGAGTCTTTCCAGCAGACTCAGGCCGCCTATCTCGCCAACGATA TTATTAGTCGTATCAAATTAAACCGTTCTCAGCTTACATCGTATGCAGGTACTTACAGTGGCACGTTATCTATTCCGGGC AAACGTTGCGATGTTTCTGTGGGGCAACCTATTGATACCTGTAATACATTTGAGACTCGATTATGGGATCTCTATCAATT GGATCAGCAAGTTTTAGGCTACTCAGAAGTGCTTGATGGTAAAAAAGTTGGCGGGTTAGATAACGCTACAGCTTGTATAG AAGCAAAGGATAGTGGTGAGGTAACTGTTGTACTTAGTTGGCGTGGAATGAATAAAGTAAATAAAGCTGGGCCTCTTCAA CCCGTTTTTGTGCGTGGTTGTGGTGAAAGTAAAAACAAGAACCAGCGTCGATTTTACTTCATTAATACGGTAATTCTTTA A
Upstream 100 bases:
>100_bases ATTAACCTGTATGCTTTCATATTACTATAAGTCACCGATTTTAAACATTAAAAATAAATTTTAACGTCAAGAATATGACG AATACTGAGGAATTGACGGA
Downstream 100 bases:
>100_bases TCTTATGAATACGGATAATAAATTAAGTCATGCGCAGTGGGGATTTTCGCTTGTTGAGCTGATGGTCGCAATGGTCGTGA GTTTATTTTTGACTCTTGGT
Product: type IV pilus modification protein PilV
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilV; Type IV Pilus Biogenesis Protein; Methylation; Type IV Pilus Assembly Protein
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MNTKEKGLSLIEVLVALVILTVGLIGVFNLHVISKRGSFESFQQTQAAYLANDIISRIKLNRSQLTSYAGTYSGTLSIPG KRCDVSVGQPIDTCNTFETRLWDLYQLDQQVLGYSEVLDGKKVGGLDNATACIEAKDSGEVTVVLSWRGMNKVNKAGPLQ PVFVRGCGESKNKNQRRFYFINTVIL
Sequences:
>Translated_186_residues MNTKEKGLSLIEVLVALVILTVGLIGVFNLHVISKRGSFESFQQTQAAYLANDIISRIKLNRSQLTSYAGTYSGTLSIPG KRCDVSVGQPIDTCNTFETRLWDLYQLDQQVLGYSEVLDGKKVGGLDNATACIEAKDSGEVTVVLSWRGMNKVNKAGPLQ PVFVRGCGESKNKNQRRFYFINTVIL >Mature_186_residues MNTKEKGLSLIEVLVALVILTVGLIGVFNLHVISKRGSFESFQQTQAAYLANDIISRIKLNRSQLTSYAGTYSGTLSIPG KRCDVSVGQPIDTCNTFETRLWDLYQLDQQVLGYSEVLDGKKVGGLDNATACIEAKDSGEVTVVLSWRGMNKVNKAGPLQ PVFVRGCGESKNKNQRRFYFINTVIL
Specific function: Unknown
COG id: COG4967
COG function: function code NU; Tfp pilus assembly protein PilV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20482; Mature: 20482
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKEKGLSLIEVLVALVILTVGLIGVFNLHVISKRGSFESFQQTQAAYLANDIISRIKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHC NRSQLTSYAGTYSGTLSIPGKRCDVSVGQPIDTCNTFETRLWDLYQLDQQVLGYSEVLDG CHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHCC KKVGGLDNATACIEAKDSGEVTVVLSWRGMNKVNKAGPLQPVFVRGCGESKNKNQRRFYF CCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEE INTVIL EEEEEC >Mature Secondary Structure MNTKEKGLSLIEVLVALVILTVGLIGVFNLHVISKRGSFESFQQTQAAYLANDIISRIKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHC NRSQLTSYAGTYSGTLSIPGKRCDVSVGQPIDTCNTFETRLWDLYQLDQQVLGYSEVLDG CHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHCC KKVGGLDNATACIEAKDSGEVTVVLSWRGMNKVNKAGPLQPVFVRGCGESKNKNQRRFYF CCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEE INTVIL EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA