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The map label for this gene is 157960889

Identifier: 157960889

GI number: 157960889

Start: 1285450

End: 1286142

Strand: Direct

Name: 157960889

Synonym: Spea_1061

Alternate gene names: NA

Gene position: 1285450-1286142 (Clockwise)

Preceding gene: 157960886

Following gene: 157960891

Centisome position: 24.84

GC content: 44.3

Gene sequence:

>693_bases
ATGGAACGAAATGTAGTCAAAGTGAAGGTATGGGATCTCCCGACACGGGTTTTTCATTGGGGTATGCTGTGTTTGCTTGG
TGGATTGTGGTGGACTGCTGATGCTGGAGAGATGGAGTGGCATCAGATCTTAGCCTACATGTTGATGATACTCATTGTCG
TGAGGCTTATTTGGGGGATTATAGGAAGTGAAACAGCTCGATTTAGTCACTTTGTTCGCTCACCAAAAAGCGTCATCAAC
TATCTTGGTAAAACTCGACGTGAGGGGATCTCGTCATCTCTCGGCCATAACCCTGTAGGGGGCTATATGGTGGTCACACT
CATCGCACTTGTTTGTGTTCAGCTCACAACGGGTTTATTTGCAACCGATGAGATTTTTACTGAAGGTCCTCTTTATTCTC
TCGTTAGCTCAGATACAGCAAGTTGGTTAACTTGGCTGCATAAAAAGAACTTCGATCTTATTTTACTCCTCGCCGCAGTG
CATGTGCTTGCCGTTGGGGTTCATATGTTGAAAGGGGATAAGATTTTAGGTGCGATGTTTAGCGGCTATAAGAAGTTACC
TGAATCGATGCAGCTAGATGACAAGAGCGATGAACTCGCATTTGTATCAATTTTGAGAGCGCTAGTATTAGCCTTGATTA
TTGGCGTCATAGTGGTGAACTATTTGATGTGGCCAGTGATTGATATGCTCTAG

Upstream 100 bases:

>100_bases
TTCTTACAAAAAAATGTGTGTAAATAACCCGATAGCACTCTCTTTAATCCCCCTTTATAATGCTGACTTGAGATAAATTT
ATTTTCGAGAGTAGCCGAAC

Downstream 100 bases:

>100_bases
GGCTCAGCACCGTTTATAAACTAAGTATATTTGGTTAGCCAATAAAAAAGCCTGTTGTTTAACAGGCTTTTTTAATTTAA
AAAACTGACAAGTCAGAATT

Product: cytochrome B561

Products: NA

Alternate protein names: Cytochrome; Nickel-Dependent Hydrogenase B-Type Cytochrome Subunit; Hydrogenase Cytochrome B-Type Subunit; B-Type Cytochrome; Cytochrome B/B6 Domain; Hydrogenase Cytochrome B-Type; Hydrogenase Cytochrome B-Type Subunit Protein; Nickel-Dependent Hydrogenase; Integral Membrane Protein; Cytochrome C Family Protein; Ni/Fe-Hydrogenase 1 B-Type Cytochrome Subunit

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MERNVVKVKVWDLPTRVFHWGMLCLLGGLWWTADAGEMEWHQILAYMLMILIVVRLIWGIIGSETARFSHFVRSPKSVIN
YLGKTRREGISSSLGHNPVGGYMVVTLIALVCVQLTTGLFATDEIFTEGPLYSLVSSDTASWLTWLHKKNFDLILLLAAV
HVLAVGVHMLKGDKILGAMFSGYKKLPESMQLDDKSDELAFVSILRALVLALIIGVIVVNYLMWPVIDML

Sequences:

>Translated_230_residues
MERNVVKVKVWDLPTRVFHWGMLCLLGGLWWTADAGEMEWHQILAYMLMILIVVRLIWGIIGSETARFSHFVRSPKSVIN
YLGKTRREGISSSLGHNPVGGYMVVTLIALVCVQLTTGLFATDEIFTEGPLYSLVSSDTASWLTWLHKKNFDLILLLAAV
HVLAVGVHMLKGDKILGAMFSGYKKLPESMQLDDKSDELAFVSILRALVLALIIGVIVVNYLMWPVIDML
>Mature_230_residues
MERNVVKVKVWDLPTRVFHWGMLCLLGGLWWTADAGEMEWHQILAYMLMILIVVRLIWGIIGSETARFSHFVRSPKSVIN
YLGKTRREGISSSLGHNPVGGYMVVTLIALVCVQLTTGLFATDEIFTEGPLYSLVSSDTASWLTWLHKKNFDLILLLAAV
HVLAVGVHMLKGDKILGAMFSGYKKLPESMQLDDKSDELAFVSILRALVLALIIGVIVVNYLMWPVIDML

Specific function: Unknown

COG id: COG3658

COG function: function code C; Cytochrome b

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25773; Mature: 25773

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERNVVKVKVWDLPTRVFHWGMLCLLGGLWWTADAGEMEWHQILAYMLMILIVVRLIWGI
CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IGSETARFSHFVRSPKSVINYLGKTRREGISSSLGHNPVGGYMVVTLIALVCVQLTTGLF
HCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCH
ATDEIFTEGPLYSLVSSDTASWLTWLHKKNFDLILLLAAVHVLAVGVHMLKGDKILGAMF
HHHHHHCCCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SGYKKLPESMQLDDKSDELAFVSILRALVLALIIGVIVVNYLMWPVIDML
HHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MERNVVKVKVWDLPTRVFHWGMLCLLGGLWWTADAGEMEWHQILAYMLMILIVVRLIWGI
CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IGSETARFSHFVRSPKSVINYLGKTRREGISSSLGHNPVGGYMVVTLIALVCVQLTTGLF
HCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCH
ATDEIFTEGPLYSLVSSDTASWLTWLHKKNFDLILLLAAVHVLAVGVHMLKGDKILGAMF
HHHHHHCCCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SGYKKLPESMQLDDKSDELAFVSILRALVLALIIGVIVVNYLMWPVIDML
HHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA