| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960791
Identifier: 157960791
GI number: 157960791
Start: 1175061
End: 1175735
Strand: Reverse
Name: 157960791
Synonym: Spea_0963
Alternate gene names: NA
Gene position: 1175735-1175061 (Counterclockwise)
Preceding gene: 157960792
Following gene: 157960789
Centisome position: 22.72
GC content: 46.81
Gene sequence:
>675_bases ATGAGCCTGCCAGTAAAGCTATCGTGTTCTCTTTTTTTGAGTACCTTTTTTATGGTTCCACAATTAAGTGAAGCCGTGAT GGATACCATTGCCGATGCATTGGTTGAAACCGGCTATATCGTTCTGTCCGACACACTACCGTCATCTGTATGTGAGCAGT TATTACAGAGTTCTAAGAATGCAACTTGGGATGATTTCCGCCCTGCTGCAATTGGTCGTGGCGGCGAGCAACAACTCGTC GATACCATTCGCAGCGACCAAATCCGTTGGCTGTCTGAGCAGCGTCCTGCAGATAAGCTCTATTTAGAGCTGATGACACA ACTGCGTGAAGGCATGAACAAGCGCCTGTTTATGGGGCTATTTGATTTTGAAAGCCATTACGCCATCTATGAGCCCGGAG CTTTCTATCAAAAGCACTCTGACGTTTTACAAGGTTCCAGAAATCGAATCCTAACATCCGTACTCTTTCTTAATCAGGGC TGGCAGCCTGAGCATGCTGGTGAGTTGGTCGTTTATGATGAAAATGACAACAAGATTGAAACCATTGCGCCAGAATTTGG TAAATGGGTGGTGTTCTTAAGCGAGCGCTTCCCCCACGAAGTCCTACGCACCGAAGTGAACAGATATAGCATCGCAGGCT GGTTTCGCGTAAGTAACGCTAACCACGGCTTCTAA
Upstream 100 bases:
>100_bases CAAACGCAACTTATAATTGCGCCGATTTTTGACTGGGTAGCCCGTTTTTCCAAGTAAACTACCCGTTCTAACACTACCTC GAATACAGTGCTCTTTTCTT
Downstream 100 bases:
>100_bases TACCTTCAGCATATACTGTTGAGAAATAAAAAACGGCGCTCAATGAGCGCCGTTTTCGTATCGAATTTACAAGCTTAATC TACAGGCTCTAGCGTATCGA
Product: 2OG-Fe(II) oxygenase
Products: NA
Alternate protein names: 2OG-Fe(II) Oxygenase Family Oxidoreductase; Prolyl 4-Hydroxylase Alpha Subunit; Proline Hydroxylase; Oxidoreductase; SM-20 Domain-Containing Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family; Oxygenase; SM-20-Related Protein; 2OG-Fe(II) Oxygenase Superfamily Protein; SM-20-Like Protein; SM-20 Domain Protein; 2OG-Fe(II) Oxygenase Family Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family Protein; 2og-Fe(Ii) Oxygenase; 2OG-Fe(II) Oxygenase Family; Prolyl 4-Hydroxylase Alpha Subunit Homologue; Egl Nine-Like Protein
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MSLPVKLSCSLFLSTFFMVPQLSEAVMDTIADALVETGYIVLSDTLPSSVCEQLLQSSKNATWDDFRPAAIGRGGEQQLV DTIRSDQIRWLSEQRPADKLYLELMTQLREGMNKRLFMGLFDFESHYAIYEPGAFYQKHSDVLQGSRNRILTSVLFLNQG WQPEHAGELVVYDENDNKIETIAPEFGKWVVFLSERFPHEVLRTEVNRYSIAGWFRVSNANHGF
Sequences:
>Translated_224_residues MSLPVKLSCSLFLSTFFMVPQLSEAVMDTIADALVETGYIVLSDTLPSSVCEQLLQSSKNATWDDFRPAAIGRGGEQQLV DTIRSDQIRWLSEQRPADKLYLELMTQLREGMNKRLFMGLFDFESHYAIYEPGAFYQKHSDVLQGSRNRILTSVLFLNQG WQPEHAGELVVYDENDNKIETIAPEFGKWVVFLSERFPHEVLRTEVNRYSIAGWFRVSNANHGF >Mature_223_residues SLPVKLSCSLFLSTFFMVPQLSEAVMDTIADALVETGYIVLSDTLPSSVCEQLLQSSKNATWDDFRPAAIGRGGEQQLVD TIRSDQIRWLSEQRPADKLYLELMTQLREGMNKRLFMGLFDFESHYAIYEPGAFYQKHSDVLQGSRNRILTSVLFLNQGW QPEHAGELVVYDENDNKIETIAPEFGKWVVFLSERFPHEVLRTEVNRYSIAGWFRVSNANHGF
Specific function: Unknown
COG id: COG3751
COG function: function code O; Predicted proline hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25651; Mature: 25520
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPVKLSCSLFLSTFFMVPQLSEAVMDTIADALVETGYIVLSDTLPSSVCEQLLQSSKN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCC ATWDDFRPAAIGRGGEQQLVDTIRSDQIRWLSEQRPADKLYLELMTQLREGMNKRLFMGL CCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEHEE FDFESHYAIYEPGAFYQKHSDVLQGSRNRILTSVLFLNQGWQPEHAGELVVYDENDNKIE ECCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEE TIAPEFGKWVVFLSERFPHEVLRTEVNRYSIAGWFRVSNANHGF ECCCCHHHEEEEHHHHCCHHHHHHHHHHEEEEEEEEECCCCCCC >Mature Secondary Structure SLPVKLSCSLFLSTFFMVPQLSEAVMDTIADALVETGYIVLSDTLPSSVCEQLLQSSKN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCC ATWDDFRPAAIGRGGEQQLVDTIRSDQIRWLSEQRPADKLYLELMTQLREGMNKRLFMGL CCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEHEE FDFESHYAIYEPGAFYQKHSDVLQGSRNRILTSVLFLNQGWQPEHAGELVVYDENDNKIE ECCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEE TIAPEFGKWVVFLSERFPHEVLRTEVNRYSIAGWFRVSNANHGF ECCCCHHHEEEEHHHHCCHHHHHHHHHHEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA