| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960761
Identifier: 157960761
GI number: 157960761
Start: 1139998
End: 1140732
Strand: Reverse
Name: 157960761
Synonym: Spea_0933
Alternate gene names: NA
Gene position: 1140732-1139998 (Counterclockwise)
Preceding gene: 157960762
Following gene: 157960759
Centisome position: 22.04
GC content: 45.71
Gene sequence:
>735_bases GTGTATAAGAAACTCAATAAAAAACGGATTGCCCAGATTGTCGGTCTATCACTTTCTACCGCGCTATTTGCCCCTCTAGC TCAAGCGGAGTTCTCTGGCGAGATCAGTGCCACTAACGATTACCGCTTCCGCGGTGTATCTCAAACTGCCGGCGACTTTG CTGTTCAAGGCAGCTTAGACTACAGCCTAGAAAATGGTCTCTTCTTTGGTGCTTGGGCGAGTAATGTTGATAAAGATAGC TATGATGCCGATGTAGAGATAGATATTTATGCCGGTTATTGGGGAGCCTTTGGTGCCGATGAAGAGTGGGAATATGACGT TACACTCACCTATTACACATACCCAGGTCAGGATGATAGTAGCCAATATCTAGAACTTAATGCTGGCATCTACTATGGCG GCTTCCATCTGGCGCAGTGGTACACCAATGACTACGCTAATGCAGATCTATCACTAAACTACACCGAGCTAAACTACTCC TATGAGATCTTCGAGAACTGGAGCATCGATGCCCATGTAGGTTACAGCTATGGTGAAGGTGTGAATGACCCTGATATGGG TGACTGGGGTGAAGACTATGTCGACTACTCTATTGGAGTCTCAACTGAGCTTGGTGGTGTAGGCCTATCTCTTGCTTGGT TAGATACTAACTTAAGTGATGACAACATCATCGATTCCAAAGAGCCATGGAGAAATGATGGCACTGTGCTTGCGACCGTA AGTTATGCTTTTTAA
Upstream 100 bases:
>100_bases GCAAAACCAAAGGATGCTTAACGCCAACTTCCTACAAGGGATTGGTATAACACTTAAAAATAAAGCATCTCAGTCAACAT AGTAAAATGGAGAAATTACC
Downstream 100 bases:
>100_bases GCTACAAATTTGCAGCTATGCAATTAATGCTAAGAAGTTAAAGCGAGTCTAAACAGTTTCCCCCAATAAAAAACCGCCGA AAGGCGGTTTTTCTTTTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MYKKLNKKRIAQIVGLSLSTALFAPLAQAEFSGEISATNDYRFRGVSQTAGDFAVQGSLDYSLENGLFFGAWASNVDKDS YDADVEIDIYAGYWGAFGADEEWEYDVTLTYYTYPGQDDSSQYLELNAGIYYGGFHLAQWYTNDYANADLSLNYTELNYS YEIFENWSIDAHVGYSYGEGVNDPDMGDWGEDYVDYSIGVSTELGGVGLSLAWLDTNLSDDNIIDSKEPWRNDGTVLATV SYAF
Sequences:
>Translated_244_residues MYKKLNKKRIAQIVGLSLSTALFAPLAQAEFSGEISATNDYRFRGVSQTAGDFAVQGSLDYSLENGLFFGAWASNVDKDS YDADVEIDIYAGYWGAFGADEEWEYDVTLTYYTYPGQDDSSQYLELNAGIYYGGFHLAQWYTNDYANADLSLNYTELNYS YEIFENWSIDAHVGYSYGEGVNDPDMGDWGEDYVDYSIGVSTELGGVGLSLAWLDTNLSDDNIIDSKEPWRNDGTVLATV SYAF >Mature_244_residues MYKKLNKKRIAQIVGLSLSTALFAPLAQAEFSGEISATNDYRFRGVSQTAGDFAVQGSLDYSLENGLFFGAWASNVDKDS YDADVEIDIYAGYWGAFGADEEWEYDVTLTYYTYPGQDDSSQYLELNAGIYYGGFHLAQWYTNDYANADLSLNYTELNYS YEIFENWSIDAHVGYSYGEGVNDPDMGDWGEDYVDYSIGVSTELGGVGLSLAWLDTNLSDDNIIDSKEPWRNDGTVLATV SYAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27245; Mature: 27245
Theoretical pI: Translated: 3.63; Mature: 3.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKKLNKKRIAQIVGLSLSTALFAPLAQAEFSGEISATNDYRFRGVSQTAGDFAVQGSLD CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEECCCCEEEEECCCCCCCEEEECCCC YSLENGLFFGAWASNVDKDSYDADVEIDIYAGYWGAFGADEEWEYDVTLTYYTYPGQDDS EEECCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCC SQYLELNAGIYYGGFHLAQWYTNDYANADLSLNYTELNYSYEIFENWSIDAHVGYSYGEG CCEEEEECCEEECCEEEEEEECCCCCCCCEEEEEEEECEEEEEEECCCEEEEECCCCCCC VNDPDMGDWGEDYVDYSIGVSTELGGVGLSLAWLDTNLSDDNIIDSKEPWRNDGTVLATV CCCCCCCCCCCCCEEEEECCCEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEE SYAF EECC >Mature Secondary Structure MYKKLNKKRIAQIVGLSLSTALFAPLAQAEFSGEISATNDYRFRGVSQTAGDFAVQGSLD CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEECCCCEEEEECCCCCCCEEEECCCC YSLENGLFFGAWASNVDKDSYDADVEIDIYAGYWGAFGADEEWEYDVTLTYYTYPGQDDS EEECCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCC SQYLELNAGIYYGGFHLAQWYTNDYANADLSLNYTELNYSYEIFENWSIDAHVGYSYGEG CCEEEEECCEEECCEEEEEEECCCCCCCCEEEEEEEECEEEEEEECCCEEEEECCCCCCC VNDPDMGDWGEDYVDYSIGVSTELGGVGLSLAWLDTNLSDDNIIDSKEPWRNDGTVLATV CCCCCCCCCCCCCEEEEECCCEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEE SYAF EECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA