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The map label for this gene is lptF [H]

Identifier: 157960739

GI number: 157960739

Start: 1116601

End: 1117716

Strand: Direct

Name: lptF [H]

Synonym: Spea_0911

Alternate gene names: 157960739

Gene position: 1116601-1117716 (Clockwise)

Preceding gene: 157960735

Following gene: 157960740

Centisome position: 21.58

GC content: 47.13

Gene sequence:

>1116_bases
GTGATTGTATTTAGATACCTGATTCGAGAAGTTTTTAAAGCACAAATAGCGGTACTTTTAGTGCTGTTAGCTATTTTTAT
TAGCCAACATTTTGTGCGTGTGCTTGCTGATGCCTCCGATGGCGACTTTCCTGCATCTCTTGTTATGACTCTACTCGGTC
TTAACATGCCATTTCTCACCGTTTTAGTCTTACCGCTAAGTCTATTTTTGGGCATTTTATTAGCCCATGGGCGTATGTAC
GCCGAAAATGAGATGGTTATTTTTCATGGCGTCGGCATCAGCGAGTGGTATATCACTCGGATCACTCTGTTGCTTGCCGT
GATTAACATGGTGTTTACTGCGTTCCTGTCTATTTATGTCGCGCCATGGGCGGAAGAGAGGCAGAATCAAGTACTGGAGC
ATGCTCAGTCCGAAGCTGGACTTGCTGCCTTAACACAGGGCCGCTTCCAGACTAGCCCTAACGGCCGTGCCGTGCTGTTT
GTCGAGCGTATTGGTCGCGATAATCAATTAGATAAGGTGTTTGTTGCCCAATTGCCAGATCCCGATGACGAAACCGGTGT
GGCAAACGTAGTGGTGGCACGTACCGGTAAAGTGGTCGAAGATGAAATTGGCGGCCAGCGTCTACAGTTAGAAGATGGGG
TGCAGTATCAGGGCAACCCTAAGCGTGTCGACTATCAAGTTGTTGAATTTGGTGGTTATCAGATGCAGATTAAAGAGCAA
GCAGTAGATGAGCGTCGCCGTAAACTGTCTGCCATGCCTATTGGTCAGCTAATGGATATCGATAGCCCTGAAGCCACGGC
TGAGTTCCATTGGCGATTGGCGATACCACTGGCAATTCCACTGATGACCTTGATTGCTGTGCCTATGGCGCGAGTGAATA
ACCGCCAGGGTAAGTTTGCTAAGATGTTCCCGGCTATTTTGCTGTACTTGGGTTATTTTGGCTTGATGGTAGCGGGGCGT
AAATCACTAGAAGATGGAGTTATTCCTCAGTACTTAGGTATGTGGTGGATCCATGCTTCCGCACTTGCCATAGGTATATT
GCTTTTAGGTAAAGAGCGTCCTTTAGGAGCTAAAGTTTCAGGCCTATTTAAGCGCAATAAGGCGAGCAAAGCATGA

Upstream 100 bases:

>100_bases
TTATGTAATTGTTGGTGACAAAACTACTAAAAGTAGACAGTCTACATGAAAGTTGTATTGATACCAGTATAAATGAAACT
TTGGAGACCGGATCCTCACT

Downstream 100 bases:

>100_bases
AAATATTAGATCTCTATATCGCCAGAATACTGATTAGTACTTCATCTTTAGCTCTACTAGTCCTAACAGGGCTGTCAGGC
ATAATTAAGTGGGTCGATCA

Product: permease YjgP/YjgQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MIVFRYLIREVFKAQIAVLLVLLAIFISQHFVRVLADASDGDFPASLVMTLLGLNMPFLTVLVLPLSLFLGILLAHGRMY
AENEMVIFHGVGISEWYITRITLLLAVINMVFTAFLSIYVAPWAEERQNQVLEHAQSEAGLAALTQGRFQTSPNGRAVLF
VERIGRDNQLDKVFVAQLPDPDDETGVANVVVARTGKVVEDEIGGQRLQLEDGVQYQGNPKRVDYQVVEFGGYQMQIKEQ
AVDERRRKLSAMPIGQLMDIDSPEATAEFHWRLAIPLAIPLMTLIAVPMARVNNRQGKFAKMFPAILLYLGYFGLMVAGR
KSLEDGVIPQYLGMWWIHASALAIGILLLGKERPLGAKVSGLFKRNKASKA

Sequences:

>Translated_371_residues
MIVFRYLIREVFKAQIAVLLVLLAIFISQHFVRVLADASDGDFPASLVMTLLGLNMPFLTVLVLPLSLFLGILLAHGRMY
AENEMVIFHGVGISEWYITRITLLLAVINMVFTAFLSIYVAPWAEERQNQVLEHAQSEAGLAALTQGRFQTSPNGRAVLF
VERIGRDNQLDKVFVAQLPDPDDETGVANVVVARTGKVVEDEIGGQRLQLEDGVQYQGNPKRVDYQVVEFGGYQMQIKEQ
AVDERRRKLSAMPIGQLMDIDSPEATAEFHWRLAIPLAIPLMTLIAVPMARVNNRQGKFAKMFPAILLYLGYFGLMVAGR
KSLEDGVIPQYLGMWWIHASALAIGILLLGKERPLGAKVSGLFKRNKASKA
>Mature_371_residues
MIVFRYLIREVFKAQIAVLLVLLAIFISQHFVRVLADASDGDFPASLVMTLLGLNMPFLTVLVLPLSLFLGILLAHGRMY
AENEMVIFHGVGISEWYITRITLLLAVINMVFTAFLSIYVAPWAEERQNQVLEHAQSEAGLAALTQGRFQTSPNGRAVLF
VERIGRDNQLDKVFVAQLPDPDDETGVANVVVARTGKVVEDEIGGQRLQLEDGVQYQGNPKRVDYQVVEFGGYQMQIKEQ
AVDERRRKLSAMPIGQLMDIDSPEATAEFHWRLAIPLAIPLMTLIAVPMARVNNRQGKFAKMFPAILLYLGYFGLMVAGR
KSLEDGVIPQYLGMWWIHASALAIGILLLGKERPLGAKVSGLFKRNKASKA

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI1790712, Length=349, Percent_Identity=37.2492836676218, Blast_Score=196, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 41294; Mature: 41294

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVFRYLIREVFKAQIAVLLVLLAIFISQHFVRVLADASDGDFPASLVMTLLGLNMPFLT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHH
VLVLPLSLFLGILLAHGRMYAENEMVIFHGVGISEWYITRITLLLAVINMVFTAFLSIYV
HHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
APWAEERQNQVLEHAQSEAGLAALTQGRFQTSPNGRAVLFVERIGRDNQLDKVFVAQLPD
CCCHHHHHHHHHHHHHHCCCHHHHHCCCCEECCCCCEEEEEECCCCCCCCCCEEEEECCC
PDDETGVANVVVARTGKVVEDEIGGQRLQLEDGVQYQGNPKRVDYQVVEFGGYQMQIKEQ
CCCCCCHHEEEEECCCCHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEEECCEEEEHHHH
AVDERRRKLSAMPIGQLMDIDSPEATAEFHWRLAIPLAIPLMTLIAVPMARVNNRQGKFA
HHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHH
KMFPAILLYLGYFGLMVAGRKSLEDGVIPQYLGMWWIHASALAIGILLLGKERPLGAKVS
HHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
GLFKRNKASKA
HHHHHCCCCCC
>Mature Secondary Structure
MIVFRYLIREVFKAQIAVLLVLLAIFISQHFVRVLADASDGDFPASLVMTLLGLNMPFLT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHH
VLVLPLSLFLGILLAHGRMYAENEMVIFHGVGISEWYITRITLLLAVINMVFTAFLSIYV
HHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
APWAEERQNQVLEHAQSEAGLAALTQGRFQTSPNGRAVLFVERIGRDNQLDKVFVAQLPD
CCCHHHHHHHHHHHHHHCCCHHHHHCCCCEECCCCCEEEEEECCCCCCCCCCEEEEECCC
PDDETGVANVVVARTGKVVEDEIGGQRLQLEDGVQYQGNPKRVDYQVVEFGGYQMQIKEQ
CCCCCCHHEEEEECCCCHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEEECCEEEEHHHH
AVDERRRKLSAMPIGQLMDIDSPEATAEFHWRLAIPLAIPLMTLIAVPMARVNNRQGKFA
HHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHH
KMFPAILLYLGYFGLMVAGRKSLEDGVIPQYLGMWWIHASALAIGILLLGKERPLGAKVS
HHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
GLFKRNKASKA
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]