| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960734
Identifier: 157960734
GI number: 157960734
Start: 1106694
End: 1107230
Strand: Reverse
Name: 157960734
Synonym: Spea_0906
Alternate gene names: NA
Gene position: 1107230-1106694 (Counterclockwise)
Preceding gene: 157960736
Following gene: 157960733
Centisome position: 21.4
GC content: 44.13
Gene sequence:
>537_bases ATGGATATGCAACAAAAACTTCAACAGTTATTAGATAAACAAGAGATGACAGAGCTTATGTATAAGTTCGCTCGTGCATT AGACAGAGTCGATGGTGAACTGATGAAATCAACCTACTGGGAAGATGCCATAGAAGAACATCAAGATCCTATCTTCCCAG AGCTATTCTTTTACAATGACAATGCACACCAATTTGTTGAACCCGCTATGGAAGGCTTTAGAGCCTTAAAAGCCACTCAG CACAGAATTAGCAATCCACTTATCGAGATCGACGGCGATACCGCTACCGCAGAGGCTTATGTCTGGGCCTATCATGTACA CGAGGAAGACTGTGTCGATAAAGAGGGCATTTTAGGCGGACGACATCATTTCCGCTTCGAGCGTCGAGACGGCATTTGGA AAATTAAACACCGCTCCACCGTGTTTGACTGGAATCAAAACCAAGATGCCACTGCGATTTGGGCCGATAACTTCAGCGAT AAATACCGCGGTAAACGCAATCGCCAAGACGACAGCTACAATTACATTTCAATCTAA
Upstream 100 bases:
>100_bases CTAATATCCCCTCATCGCTTTACAGCTAATTCAACCGCCCAACCAATAAGGGAGTAGCGGCTGATTTAACCAAATAAAAA ATGACGAGAGGATTAACATC
Downstream 100 bases:
>100_bases CTATTATTTGCGATTACAGCTTATGGAGGCCTTGGCCTCCATCTCAATAAGCGACAGATTAACGGCTATCTAGCCTAAGA AGGATAATGATATGTCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MDMQQKLQQLLDKQEMTELMYKFARALDRVDGELMKSTYWEDAIEEHQDPIFPELFFYNDNAHQFVEPAMEGFRALKATQ HRISNPLIEIDGDTATAEAYVWAYHVHEEDCVDKEGILGGRHHFRFERRDGIWKIKHRSTVFDWNQNQDATAIWADNFSD KYRGKRNRQDDSYNYISI
Sequences:
>Translated_178_residues MDMQQKLQQLLDKQEMTELMYKFARALDRVDGELMKSTYWEDAIEEHQDPIFPELFFYNDNAHQFVEPAMEGFRALKATQ HRISNPLIEIDGDTATAEAYVWAYHVHEEDCVDKEGILGGRHHFRFERRDGIWKIKHRSTVFDWNQNQDATAIWADNFSD KYRGKRNRQDDSYNYISI >Mature_178_residues MDMQQKLQQLLDKQEMTELMYKFARALDRVDGELMKSTYWEDAIEEHQDPIFPELFFYNDNAHQFVEPAMEGFRALKATQ HRISNPLIEIDGDTATAEAYVWAYHVHEEDCVDKEGILGGRHHFRFERRDGIWKIKHRSTVFDWNQNQDATAIWADNFSD KYRGKRNRQDDSYNYISI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21242; Mature: 21242
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMQQKLQQLLDKQEMTELMYKFARALDRVDGELMKSTYWEDAIEEHQDPIFPELFFYND CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC NAHQFVEPAMEGFRALKATQHRISNPLIEIDGDTATAEAYVWAYHVHEEDCVDKEGILGG CHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEECCHHHCCCCCCCCCC RHHFRFERRDGIWKIKHRSTVFDWNQNQDATAIWADNFSDKYRGKRNRQDDSYNYISI HHHEEEECCCCEEEEECCCEEECCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCEECC >Mature Secondary Structure MDMQQKLQQLLDKQEMTELMYKFARALDRVDGELMKSTYWEDAIEEHQDPIFPELFFYND CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC NAHQFVEPAMEGFRALKATQHRISNPLIEIDGDTATAEAYVWAYHVHEEDCVDKEGILGG CHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEECCHHHCCCCCCCCCC RHHFRFERRDGIWKIKHRSTVFDWNQNQDATAIWADNFSDKYRGKRNRQDDSYNYISI HHHEEEECCCCEEEEECCCEEECCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8796346; 9163424 [H]