Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157960734

Identifier: 157960734

GI number: 157960734

Start: 1106694

End: 1107230

Strand: Reverse

Name: 157960734

Synonym: Spea_0906

Alternate gene names: NA

Gene position: 1107230-1106694 (Counterclockwise)

Preceding gene: 157960736

Following gene: 157960733

Centisome position: 21.4

GC content: 44.13

Gene sequence:

>537_bases
ATGGATATGCAACAAAAACTTCAACAGTTATTAGATAAACAAGAGATGACAGAGCTTATGTATAAGTTCGCTCGTGCATT
AGACAGAGTCGATGGTGAACTGATGAAATCAACCTACTGGGAAGATGCCATAGAAGAACATCAAGATCCTATCTTCCCAG
AGCTATTCTTTTACAATGACAATGCACACCAATTTGTTGAACCCGCTATGGAAGGCTTTAGAGCCTTAAAAGCCACTCAG
CACAGAATTAGCAATCCACTTATCGAGATCGACGGCGATACCGCTACCGCAGAGGCTTATGTCTGGGCCTATCATGTACA
CGAGGAAGACTGTGTCGATAAAGAGGGCATTTTAGGCGGACGACATCATTTCCGCTTCGAGCGTCGAGACGGCATTTGGA
AAATTAAACACCGCTCCACCGTGTTTGACTGGAATCAAAACCAAGATGCCACTGCGATTTGGGCCGATAACTTCAGCGAT
AAATACCGCGGTAAACGCAATCGCCAAGACGACAGCTACAATTACATTTCAATCTAA

Upstream 100 bases:

>100_bases
CTAATATCCCCTCATCGCTTTACAGCTAATTCAACCGCCCAACCAATAAGGGAGTAGCGGCTGATTTAACCAAATAAAAA
ATGACGAGAGGATTAACATC

Downstream 100 bases:

>100_bases
CTATTATTTGCGATTACAGCTTATGGAGGCCTTGGCCTCCATCTCAATAAGCGACAGATTAACGGCTATCTAGCCTAAGA
AGGATAATGATATGTCATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MDMQQKLQQLLDKQEMTELMYKFARALDRVDGELMKSTYWEDAIEEHQDPIFPELFFYNDNAHQFVEPAMEGFRALKATQ
HRISNPLIEIDGDTATAEAYVWAYHVHEEDCVDKEGILGGRHHFRFERRDGIWKIKHRSTVFDWNQNQDATAIWADNFSD
KYRGKRNRQDDSYNYISI

Sequences:

>Translated_178_residues
MDMQQKLQQLLDKQEMTELMYKFARALDRVDGELMKSTYWEDAIEEHQDPIFPELFFYNDNAHQFVEPAMEGFRALKATQ
HRISNPLIEIDGDTATAEAYVWAYHVHEEDCVDKEGILGGRHHFRFERRDGIWKIKHRSTVFDWNQNQDATAIWADNFSD
KYRGKRNRQDDSYNYISI
>Mature_178_residues
MDMQQKLQQLLDKQEMTELMYKFARALDRVDGELMKSTYWEDAIEEHQDPIFPELFFYNDNAHQFVEPAMEGFRALKATQ
HRISNPLIEIDGDTATAEAYVWAYHVHEEDCVDKEGILGGRHHFRFERRDGIWKIKHRSTVFDWNQNQDATAIWADNFSD
KYRGKRNRQDDSYNYISI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21242; Mature: 21242

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMQQKLQQLLDKQEMTELMYKFARALDRVDGELMKSTYWEDAIEEHQDPIFPELFFYND
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
NAHQFVEPAMEGFRALKATQHRISNPLIEIDGDTATAEAYVWAYHVHEEDCVDKEGILGG
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEECCHHHCCCCCCCCCC
RHHFRFERRDGIWKIKHRSTVFDWNQNQDATAIWADNFSDKYRGKRNRQDDSYNYISI
HHHEEEECCCCEEEEECCCEEECCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCEECC
>Mature Secondary Structure
MDMQQKLQQLLDKQEMTELMYKFARALDRVDGELMKSTYWEDAIEEHQDPIFPELFFYND
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
NAHQFVEPAMEGFRALKATQHRISNPLIEIDGDTATAEAYVWAYHVHEEDCVDKEGILGG
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEECCHHHCCCCCCCCCC
RHHFRFERRDGIWKIKHRSTVFDWNQNQDATAIWADNFSDKYRGKRNRQDDSYNYISI
HHHEEEECCCCEEEEECCCEEECCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]