| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157960710
Identifier: 157960710
GI number: 157960710
Start: 1079987
End: 1080472
Strand: Reverse
Name: 157960710
Synonym: Spea_0882
Alternate gene names: NA
Gene position: 1080472-1079987 (Counterclockwise)
Preceding gene: 157960712
Following gene: 157960708
Centisome position: 20.88
GC content: 44.44
Gene sequence:
>486_bases ATGAACCAACAATACAGCTACACCACACAATACACATTAGACAAGAGCCATTTTAGCGAGTGCTACGATGAATCTGTTGT GGTCGACAAAACCATACGCGCTTACCGCAAGGCCATTATCTTTAGCATCGTAGGTATCGCCTTACTGCTAACCAATATCA ATGGCTATGCCTCGTGGTTCATCATAGCCCTAGGTGCTCTCGAAGCCCTAAGTGTCTACTTTAGAAAACCATGGTGGCTG ATGCGCCAGATGATGAGCAAAGCCGCAAATAACGAAGTGACCTTAACCATAGATGAGTCAGGCATAACTAATGACTCATT CTATGTTCAAGGTACTATATTGTGGCAAGACATCAACAGCATCACCTCCACAGAGCAAGGTTTCTTAATCAAGCACGCCA AGGGAACCAGTTATCTGTCTAAGCGCAGCCTGGATAAGCAAGCCACTGAGTTTGTTTCAAGCAAGATGTCAGAGACAAAT GACTAA
Upstream 100 bases:
>100_bases TAAGCTCAAGTTAAGCGACTATCAGCAAACTAAACACTATAATCAGCCGCACTAACACCAATATTCACTCGCAAGCCCTT GCGAGTAATAATGAGAAACA
Downstream 100 bases:
>100_bases TCTCTAACATTAGCCATCAGAAATGCGTCAATATATTCGCCATCACGAAAAGCATATTCACGCATTTCTCCCTCAATCAC AAAACCATGCTTTTTATACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MNQQYSYTTQYTLDKSHFSECYDESVVVDKTIRAYRKAIIFSIVGIALLLTNINGYASWFIIALGALEALSVYFRKPWWL MRQMMSKAANNEVTLTIDESGITNDSFYVQGTILWQDINSITSTEQGFLIKHAKGTSYLSKRSLDKQATEFVSSKMSETN D
Sequences:
>Translated_161_residues MNQQYSYTTQYTLDKSHFSECYDESVVVDKTIRAYRKAIIFSIVGIALLLTNINGYASWFIIALGALEALSVYFRKPWWL MRQMMSKAANNEVTLTIDESGITNDSFYVQGTILWQDINSITSTEQGFLIKHAKGTSYLSKRSLDKQATEFVSSKMSETN D >Mature_161_residues MNQQYSYTTQYTLDKSHFSECYDESVVVDKTIRAYRKAIIFSIVGIALLLTNINGYASWFIIALGALEALSVYFRKPWWL MRQMMSKAANNEVTLTIDESGITNDSFYVQGTILWQDINSITSTEQGFLIKHAKGTSYLSKRSLDKQATEFVSSKMSETN D
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18359; Mature: 18359
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQQYSYTTQYTLDKSHFSECYDESVVVDKTIRAYRKAIIFSIVGIALLLTNINGYASWF CCCCCCEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH IIALGALEALSVYFRKPWWLMRQMMSKAANNEVTLTIDESGITNDSFYVQGTILWQDINS HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEEEEHHHH ITSTEQGFLIKHAKGTSYLSKRSLDKQATEFVSSKMSETND HHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNQQYSYTTQYTLDKSHFSECYDESVVVDKTIRAYRKAIIFSIVGIALLLTNINGYASWF CCCCCCEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH IIALGALEALSVYFRKPWWLMRQMMSKAANNEVTLTIDESGITNDSFYVQGTILWQDINS HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEEEEHHHH ITSTEQGFLIKHAKGTSYLSKRSLDKQATEFVSSKMSETND HHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA