| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is metK [H]
Identifier: 157960615
GI number: 157960615
Start: 972502
End: 973656
Strand: Reverse
Name: metK [H]
Synonym: Spea_0787
Alternate gene names: 157960615
Gene position: 973656-972502 (Counterclockwise)
Preceding gene: 157960624
Following gene: 157960614
Centisome position: 18.82
GC content: 47.71
Gene sequence:
>1155_bases ATGGCAAAGCACTTGTTTACCTCTGAGTCGGTCTCAGAAGGTCATCCAGATAAAATCGCCGATCAGATTTCTGATGCGGT ACTAGACGCAATTTTGGAGCAAGATCCAAAAGCTCGTGTAGCATGCGAAACTTATGTCAAAACTGGCATGGTTATGGTTG GCGGCGAAGTTACCACTTCAGCCTGGGTTGATATCGAAGAGATCACCCGTAAGACTGTACGCGACATTGGCTACACTCAC TCAGACATGGGTTTTGATGCCGATTCTTGCGCCATCTTAAACGTGATTGGTAAGCAGTCTCCAGACATCAACCAAGGTGT TGATCGTGCAGACCCTAAAGAACAGGGTGCTGGTGACCAAGGTCTAATGTTCGGTTACGCTAACAACGAAACTGACGTAC TAATGCCTGCGCCTATCACTTATTCGCACAAGCTTGTTAAGCGTCAGTCTGAAGTTCGTAAAGACAAGACTCTTCCATGG TTGCGTCCAGACGCGAAGAGCCAGGTGACTTTTGCTTATAACTCAGATGGCAGCATTGCTGGTATCGATGCAGTTGTTCT ATCTACGCAACACAGCGAAGATGTGACTCAAGCAGACCTAATTGAAGGTGTAATGGAAACCATCATCAAGCCAGTATTAC CGGCTAAGTGGTTATCTAAAGACACTAAATACTTCATCAACCCAACTGGCCGTTTCGTTATCGGTGGTCCAGTAGGTGAT TGTGGTCTAACGGGTCGTAAGATCATCGTTGACACATACGGTGGTATGGCTCGTCACGGTGGTGGTGCTTTCTCTGGTAA AGACCCATCAAAAGTTGACCGTAGTGCAGCATACGCAGCACGTTACGTTGCTAAAAACATCGTTGCAGCAGGTCTTGCAG ACCGTTGTGAGATCCAAGTTTCTTACGCGATTGGTGTTGCAGAGCCAACTTCAATCAGCATCGAAACATTTGGCACAGCT AAAGTTGGCGAAGAGCTATTGATCGACCTAGTACGTCGTCACTTCGACCTACGCCCATACGGTCTAACAGAGATGTTGAA CCTAGCTCGCCCAATCTACCAAGCGACTGCAGCATACGGTCACTTTGGTCGTAACGAGTTCCCGTGGGAAGCAACAGACA AAGTTGACGCACTACGCGCTGACGCAGGTCTTTAA
Upstream 100 bases:
>100_bases TGGTGAAGGGGGTGTCATCAACTCGGTTTTACACTAGAATAGCCGTCTAGATGTAGATACTTCTACACATTCAAATTGTT TAAAGACGAGATTTTCCATC
Downstream 100 bases:
>100_bases TCGTCACCGATTAGTTCGGCGTTGTTTGTTCAACGCCAATAAAAACCGCCGCTTGGCGGTTTTTTTATGTCCGGAACATT TATGACTATTTGCCAAGGAT
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRKTVRDIGYTH SDMGFDADSCAILNVIGKQSPDINQGVDRADPKEQGAGDQGLMFGYANNETDVLMPAPITYSHKLVKRQSEVRKDKTLPW LRPDAKSQVTFAYNSDGSIAGIDAVVLSTQHSEDVTQADLIEGVMETIIKPVLPAKWLSKDTKYFINPTGRFVIGGPVGD CGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISIETFGTA KVGEELLIDLVRRHFDLRPYGLTEMLNLARPIYQATAAYGHFGRNEFPWEATDKVDALRADAGL
Sequences:
>Translated_384_residues MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRKTVRDIGYTH SDMGFDADSCAILNVIGKQSPDINQGVDRADPKEQGAGDQGLMFGYANNETDVLMPAPITYSHKLVKRQSEVRKDKTLPW LRPDAKSQVTFAYNSDGSIAGIDAVVLSTQHSEDVTQADLIEGVMETIIKPVLPAKWLSKDTKYFINPTGRFVIGGPVGD CGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISIETFGTA KVGEELLIDLVRRHFDLRPYGLTEMLNLARPIYQATAAYGHFGRNEFPWEATDKVDALRADAGL >Mature_383_residues AKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRKTVRDIGYTHS DMGFDADSCAILNVIGKQSPDINQGVDRADPKEQGAGDQGLMFGYANNETDVLMPAPITYSHKLVKRQSEVRKDKTLPWL RPDAKSQVTFAYNSDGSIAGIDAVVLSTQHSEDVTQADLIEGVMETIIKPVLPAKWLSKDTKYFINPTGRFVIGGPVGDC GLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISIETFGTAK VGEELLIDLVRRHFDLRPYGLTEMLNLARPIYQATAAYGHFGRNEFPWEATDKVDALRADAGL
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI4557737, Length=376, Percent_Identity=57.9787234042553, Blast_Score=420, Evalue=1e-117, Organism=Homo sapiens, GI5174529, Length=376, Percent_Identity=57.4468085106383, Blast_Score=417, Evalue=1e-116, Organism=Escherichia coli, GI1789311, Length=384, Percent_Identity=83.8541666666667, Blast_Score=671, Evalue=0.0, Organism=Caenorhabditis elegans, GI17538498, Length=372, Percent_Identity=56.1827956989247, Blast_Score=409, Evalue=1e-114, Organism=Caenorhabditis elegans, GI25145633, Length=377, Percent_Identity=55.1724137931034, Blast_Score=405, Evalue=1e-113, Organism=Caenorhabditis elegans, GI17538494, Length=372, Percent_Identity=55.6451612903226, Blast_Score=405, Evalue=1e-113, Organism=Caenorhabditis elegans, GI17551082, Length=373, Percent_Identity=54.9597855227882, Blast_Score=399, Evalue=1e-111, Organism=Caenorhabditis elegans, GI32565905, Length=372, Percent_Identity=50.5376344086022, Blast_Score=344, Evalue=4e-95, Organism=Caenorhabditis elegans, GI32565911, Length=325, Percent_Identity=52.6153846153846, Blast_Score=333, Evalue=9e-92, Organism=Caenorhabditis elegans, GI25145635, Length=330, Percent_Identity=51.5151515151515, Blast_Score=330, Evalue=1e-90, Organism=Caenorhabditis elegans, GI32565903, Length=298, Percent_Identity=52.6845637583893, Blast_Score=299, Evalue=1e-81, Organism=Caenorhabditis elegans, GI32565909, Length=87, Percent_Identity=60.9195402298851, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI32565907, Length=46, Percent_Identity=73.9130434782609, Blast_Score=72, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6320710, Length=376, Percent_Identity=55.5851063829787, Blast_Score=410, Evalue=1e-115, Organism=Saccharomyces cerevisiae, GI6323209, Length=370, Percent_Identity=56.7567567567568, Blast_Score=409, Evalue=1e-115, Organism=Drosophila melanogaster, GI45552159, Length=374, Percent_Identity=54.8128342245989, Blast_Score=386, Evalue=1e-107, Organism=Drosophila melanogaster, GI24580529, Length=374, Percent_Identity=54.8128342245989, Blast_Score=386, Evalue=1e-107, Organism=Drosophila melanogaster, GI24580537, Length=374, Percent_Identity=54.8128342245989, Blast_Score=386, Evalue=1e-107, Organism=Drosophila melanogaster, GI24580533, Length=374, Percent_Identity=54.8128342245989, Blast_Score=386, Evalue=1e-107, Organism=Drosophila melanogaster, GI24580535, Length=374, Percent_Identity=54.8128342245989, Blast_Score=386, Evalue=1e-107, Organism=Drosophila melanogaster, GI24580531, Length=374, Percent_Identity=54.8128342245989, Blast_Score=386, Evalue=1e-107, Organism=Drosophila melanogaster, GI24580527, Length=373, Percent_Identity=54.1554959785523, Blast_Score=380, Evalue=1e-106, Organism=Drosophila melanogaster, GI24580525, Length=373, Percent_Identity=54.1554959785523, Blast_Score=380, Evalue=1e-106, Organism=Drosophila melanogaster, GI24580541, Length=372, Percent_Identity=51.8817204301075, Blast_Score=358, Evalue=4e-99, Organism=Drosophila melanogaster, GI24580539, Length=120, Percent_Identity=55, Blast_Score=130, Evalue=2e-30,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 41605; Mature: 41474
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEVTTS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEECCCCCCH AWVDIEEITRKTVRDIGYTHSDMGFDADSCAILNVIGKQSPDINQGVDRADPKEQGAGDQ HCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHCCCCCCCCHHHCCCCC GLMFGYANNETDVLMPAPITYSHKLVKRQSEVRKDKTLPWLRPDAKSQVTFAYNSDGSIA CEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEE GIDAVVLSTQHSEDVTQADLIEGVMETIIKPVLPAKWLSKDTKYFINPTGRFVIGGPVGD CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCCEEECCCCCC CGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQV CCCCCCEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE SYAIGVAEPTSISIETFGTAKVGEELLIDLVRRHFDLRPYGLTEMLNLARPIYQATAAYG EEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH HFGRNEFPWEATDKVDALRADAGL CCCCCCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure AKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEVTTS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEECCCCCCH AWVDIEEITRKTVRDIGYTHSDMGFDADSCAILNVIGKQSPDINQGVDRADPKEQGAGDQ HCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHCCCCCCCCHHHCCCCC GLMFGYANNETDVLMPAPITYSHKLVKRQSEVRKDKTLPWLRPDAKSQVTFAYNSDGSIA CEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEE GIDAVVLSTQHSEDVTQADLIEGVMETIIKPVLPAKWLSKDTKYFINPTGRFVIGGPVGD CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCCEEECCCCCC CGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQV CCCCCCEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE SYAIGVAEPTSISIETFGTAKVGEELLIDLVRRHFDLRPYGLTEMLNLARPIYQATAAYG EEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH HFGRNEFPWEATDKVDALRADAGL CCCCCCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA