| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960583
Identifier: 157960583
GI number: 157960583
Start: 937293
End: 938285
Strand: Reverse
Name: 157960583
Synonym: Spea_0755
Alternate gene names: NA
Gene position: 938285-937293 (Counterclockwise)
Preceding gene: 157960587
Following gene: 157960582
Centisome position: 18.13
GC content: 48.14
Gene sequence:
>993_bases ATGCCCACAGATAGCCACACGACTCACCAATGCCGTTACCATGAAAATAATCAACATATCTGCCGAGAGATCGCTGGAGA CTCAGGCCTGTGCTACTGGCATGACCCACAAGTCATAAAGAATAATCCCGATGATATTCATAAGCTTGAGCAGTTTGCTC GCCAAGGCGGCCAGCTCAGGGGCATCAGCCTAAACCACGCCAAACTGGCCAATATCGATCTGGTTCGTCATCAAGAGAAA ATCGGCTTCGATTTAAGTAACGCCGAGCTCTATCGCGCCGATCTAAGCGGTGCTCATCTGTTTAATATCAAACTCGAAAA TGCCAGCCTAATGAAGGCCGATTTACGAGACGCAACGGTTCACTGTGCCAATTTGCAGGGCTGTAACCTGCTTGGCGTAA AGTGGCTCGGCGCCAAAATTGAAAATATGCATACAGGAAACACCCTACGCCAAGAAAGGCTCGCCCGTGCCGCCAAGAAA GCAGGAGATACAGAAAGAACAACCGACTATTTAGAGCAGGCCGAAGAGATCTATCGCGACTTGCGTAAAGCCGCCGACAG GGAGGGACTATTTGCCATGTCAGGCCAATATATTCGCAAAGAGCTCACCATGCGTCGCTACCAGATGCCCAGATATTGCC TTAAACGCATTATCTCTAAGACCATAGATCTGTTTTGCGGCTATGGCGAAGCGCCTTTAAGGGTTGTCGGTTTCTCACTT ATCCTTATTCTCATCAGCGCAGTGCTCTACTTCTTTAGCGGGCTGCAATACGGCGATCAGTTACAGGTCTTTAGCCTAAA TAACGATTTCGGCACTAACTTCATGCTGTTTCTCAACTGTATTTACTATTCGGTCGTCACTTTCACCACCCTAGGTTATG GCGACTTTACCCCCATAGGCTTCTCTCGGGCTATCGCAGCTTTCGAAGCCTTTACGGGTAGCTTTACTATTGCGCTATTC GTGGTGGTTTTTGTAAAAAAAATGACCCGCTAA
Upstream 100 bases:
>100_bases ACCGAAGATGAAGTTTTTAGGCTGGCTGTCTTTACAGGGCACTTCTATACTCAATATTACCCAGCCACTTGCCAAGCCAC TTTGATGGTTGACGCTATTT
Downstream 100 bases:
>100_bases AATCAAACATTAGTAATGCAAAAATGGCTGCAGAATCACCGCAAACAGCCCTTCAAACCTAGATCACACATCAGACCAGC TACAATCATTCACGCGCACA
Product: Ion transport 2 domain-containing protein
Products: NA
Alternate protein names: Voltage-Gated Potassium Channel; Low-Complexity Protein; Ion Transport 2 Domain Protein; Pentapeptide Repeat Family Protein; Potassium Channel Protein; Pentapeptide Repeat-Containing Protein; Pentapeptide Repeat Protein
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MPTDSHTTHQCRYHENNQHICREIAGDSGLCYWHDPQVIKNNPDDIHKLEQFARQGGQLRGISLNHAKLANIDLVRHQEK IGFDLSNAELYRADLSGAHLFNIKLENASLMKADLRDATVHCANLQGCNLLGVKWLGAKIENMHTGNTLRQERLARAAKK AGDTERTTDYLEQAEEIYRDLRKAADREGLFAMSGQYIRKELTMRRYQMPRYCLKRIISKTIDLFCGYGEAPLRVVGFSL ILILISAVLYFFSGLQYGDQLQVFSLNNDFGTNFMLFLNCIYYSVVTFTTLGYGDFTPIGFSRAIAAFEAFTGSFTIALF VVVFVKKMTR
Sequences:
>Translated_330_residues MPTDSHTTHQCRYHENNQHICREIAGDSGLCYWHDPQVIKNNPDDIHKLEQFARQGGQLRGISLNHAKLANIDLVRHQEK IGFDLSNAELYRADLSGAHLFNIKLENASLMKADLRDATVHCANLQGCNLLGVKWLGAKIENMHTGNTLRQERLARAAKK AGDTERTTDYLEQAEEIYRDLRKAADREGLFAMSGQYIRKELTMRRYQMPRYCLKRIISKTIDLFCGYGEAPLRVVGFSL ILILISAVLYFFSGLQYGDQLQVFSLNNDFGTNFMLFLNCIYYSVVTFTTLGYGDFTPIGFSRAIAAFEAFTGSFTIALF VVVFVKKMTR >Mature_329_residues PTDSHTTHQCRYHENNQHICREIAGDSGLCYWHDPQVIKNNPDDIHKLEQFARQGGQLRGISLNHAKLANIDLVRHQEKI GFDLSNAELYRADLSGAHLFNIKLENASLMKADLRDATVHCANLQGCNLLGVKWLGAKIENMHTGNTLRQERLARAAKKA GDTERTTDYLEQAEEIYRDLRKAADREGLFAMSGQYIRKELTMRRYQMPRYCLKRIISKTIDLFCGYGEAPLRVVGFSLI LILISAVLYFFSGLQYGDQLQVFSLNNDFGTNFMLFLNCIYYSVVTFTTLGYGDFTPIGFSRAIAAFEAFTGSFTIALFV VVFVKKMTR
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37538; Mature: 37406
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTDSHTTHQCRYHENNQHICREIAGDSGLCYWHDPQVIKNNPDDIHKLEQFARQGGQLR CCCCCCCCCEEEECCCCHHHHHHHCCCCCEEEECCCHHCCCCCHHHHHHHHHHHCCCCEE GISLNHAKLANIDLVRHQEKIGFDLSNAELYRADLSGAHLFNIKLENASLMKADLRDATV EEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHE HCANLQGCNLLGVKWLGAKIENMHTGNTLRQERLARAAKKAGDTERTTDYLEQAEEIYRD EEECCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LRKAADREGLFAMSGQYIRKELTMRRYQMPRYCLKRIISKTIDLFCGYGEAPLRVVGFSL HHHHHCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ILILISAVLYFFSGLQYGDQLQVFSLNNDFGTNFMLFLNCIYYSVVTFTTLGYGDFTPIG HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC FSRAIAAFEAFTGSFTIALFVVVFVKKMTR HHHHHHHHHHHCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure PTDSHTTHQCRYHENNQHICREIAGDSGLCYWHDPQVIKNNPDDIHKLEQFARQGGQLR CCCCCCCCEEEECCCCHHHHHHHCCCCCEEEECCCHHCCCCCHHHHHHHHHHHCCCCEE GISLNHAKLANIDLVRHQEKIGFDLSNAELYRADLSGAHLFNIKLENASLMKADLRDATV EEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHE HCANLQGCNLLGVKWLGAKIENMHTGNTLRQERLARAAKKAGDTERTTDYLEQAEEIYRD EEECCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LRKAADREGLFAMSGQYIRKELTMRRYQMPRYCLKRIISKTIDLFCGYGEAPLRVVGFSL HHHHHCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ILILISAVLYFFSGLQYGDQLQVFSLNNDFGTNFMLFLNCIYYSVVTFTTLGYGDFTPIG HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC FSRAIAAFEAFTGSFTIALFVVVFVKKMTR HHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA