| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960569
Identifier: 157960569
GI number: 157960569
Start: 918057
End: 918467
Strand: Reverse
Name: 157960569
Synonym: Spea_0741
Alternate gene names: NA
Gene position: 918467-918057 (Counterclockwise)
Preceding gene: 157960572
Following gene: 157960568
Centisome position: 17.75
GC content: 47.2
Gene sequence:
>411_bases ATGGCCAGAAAAGAACTCTCAGAAAAGCAATTTATGGTCCAACGGCTTTCTAAAACCGCCCTACGCGCTTTGCATATTTT GGGGGTCACAGGGGCTGGCGGTGGCATTTTACTGCAGGTTCCTCAAGATCAATGGTTGGTCTATTGGATCATGGCCATGA GTACGGGAGCCGCCATGATGGCGTGGGAGATAGTGCGTGACTGGCGCTGGCTAATCCAGCTAAAGGGCGTACTAACCTTG GTAAAACTTGGTTTGCTAGTCCTGTTCATTCCTTTGGCACACTATAAACCAGAGCTACTGATTTCCATCGTATTATTATC GGTTGTTGTCTCTCATGGTCCTTCCGGTTTGAGACATTACTCAGTCGTACATAGACGCAGAATTGGCGGCAAAAAAGAAG TTAAAGGCTAA
Upstream 100 bases:
>100_bases AAATTTCTACTATAGATTGAGCTTGTGATCTCTCAATGCTTTTCAAATAGCCATTTCCTGATAAGATTTGCAAAATAGTA ACAGCACAAGACTCCTAAAT
Downstream 100 bases:
>100_bases CACCATGAGTAGCGCTGAATTAATCAAACAATTTACTCAACTTAAAGATCAACTCTCCCCCATGGCGAAAGTACTCGACC TAGCCTGTGGCAACGGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MARKELSEKQFMVQRLSKTALRALHILGVTGAGGGILLQVPQDQWLVYWIMAMSTGAAMMAWEIVRDWRWLIQLKGVLTL VKLGLLVLFIPLAHYKPELLISIVLLSVVVSHGPSGLRHYSVVHRRRIGGKKEVKG
Sequences:
>Translated_136_residues MARKELSEKQFMVQRLSKTALRALHILGVTGAGGGILLQVPQDQWLVYWIMAMSTGAAMMAWEIVRDWRWLIQLKGVLTL VKLGLLVLFIPLAHYKPELLISIVLLSVVVSHGPSGLRHYSVVHRRRIGGKKEVKG >Mature_135_residues ARKELSEKQFMVQRLSKTALRALHILGVTGAGGGILLQVPQDQWLVYWIMAMSTGAAMMAWEIVRDWRWLIQLKGVLTLV KLGLLVLFIPLAHYKPELLISIVLLSVVVSHGPSGLRHYSVVHRRRIGGKKEVKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15276; Mature: 15145
Theoretical pI: Translated: 11.26; Mature: 11.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKELSEKQFMVQRLSKTALRALHILGVTGAGGGILLQVPQDQWLVYWIMAMSTGAAMM CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCHHHH AWEIVRDWRWLIQLKGVLTLVKLGLLVLFIPLAHYKPELLISIVLLSVVVSHGPSGLRHY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHH SVVHRRRIGGKKEVKG HHHHHHHCCCCCCCCC >Mature Secondary Structure ARKELSEKQFMVQRLSKTALRALHILGVTGAGGGILLQVPQDQWLVYWIMAMSTGAAMM CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCHHHH AWEIVRDWRWLIQLKGVLTLVKLGLLVLFIPLAHYKPELLISIVLLSVVVSHGPSGLRHY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHH SVVHRRRIGGKKEVKG HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA