Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is sfsA

Identifier: 157960527

GI number: 157960527

Start: 859010

End: 859714

Strand: Reverse

Name: sfsA

Synonym: Spea_0699

Alternate gene names: 157960527

Gene position: 859714-859010 (Counterclockwise)

Preceding gene: 157960530

Following gene: 157960526

Centisome position: 16.61

GC content: 46.67

Gene sequence:

>705_bases
ATGGAATTTAGTCCCGCTTTCGAAACTGGCGTATTAGTCCAACGCTATAAACGTTTTTTAACTGATATCACCTTAGATAA
TGGTGAGCAGGTCACGATTCATTGCCCCAATACGGGCTCGATGAAGAACTGCTTATTTCCCGGTGAAAAAGTCTGGTTCT
CAACCTCTGATAATCCAAAGCGTAAATACAGCCGAACCTGGGAGTTAGCCCAAACCCCAGAAGGCCACATCATTGGCATC
AATACTGGCCGCGCCAATGCACTGGCTGAAGAGGCAATTCACGCAGGCGTCATTACTGAGCTACAGGGCTATCATTCTCT
GCGCCGAGAAGTGAAATACGGCAGTGAAAACAGCCGCATCGATATCTTGCTTGAAGATACAAAAAAGCCTAACTGCTATA
TAGAAGTCAAAAGTTGTACTTTATTAGAAGAGGGTCAAGGCTACTTCCCTGACGCCGTGACCGCGCGAGGGCAAAAACAT
CTACGCGAACTCATGGAAATGGTGGAGCAAGGACAACGTGCCGTATTGCTATTTGTTGTTCAGCATTCGGGCATAAAAAG
TGTCCAAGCTGCGACGCATATCGATGCCGAATATGCCGAATTACTCAGTAAAGCCTATCACAAAGGTGTCGAGATAATAG
CCTATAGCACCGACTCATCGCCTTTGGGAGCAAGTCTGGTCAAATCCTGTCCGGTTAGGCTTTAA

Upstream 100 bases:

>100_bases
CCAAATCTTTATACTGATTGGTATAAATAGCAGCCAGCAGCCCCACAGCTGGGTAGAATTTTGTTAACCTACAACAAACT
AATTAACAGCTCATGACTCA

Downstream 100 bases:

>100_bases
ATCAGAAGATAGGGTTGAAATTGTTCGTAATAGCGGACATAGTCAAAGAATAGACCCCGATTAACACAAATTATTTGCCT
AGTATAAAGCTTTCTGGTAT

Product: sugar fermentation stimulation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MEFSPAFETGVLVQRYKRFLTDITLDNGEQVTIHCPNTGSMKNCLFPGEKVWFSTSDNPKRKYSRTWELAQTPEGHIIGI
NTGRANALAEEAIHAGVITELQGYHSLRREVKYGSENSRIDILLEDTKKPNCYIEVKSCTLLEEGQGYFPDAVTARGQKH
LRELMEMVEQGQRAVLLFVVQHSGIKSVQAATHIDAEYAELLSKAYHKGVEIIAYSTDSSPLGASLVKSCPVRL

Sequences:

>Translated_234_residues
MEFSPAFETGVLVQRYKRFLTDITLDNGEQVTIHCPNTGSMKNCLFPGEKVWFSTSDNPKRKYSRTWELAQTPEGHIIGI
NTGRANALAEEAIHAGVITELQGYHSLRREVKYGSENSRIDILLEDTKKPNCYIEVKSCTLLEEGQGYFPDAVTARGQKH
LRELMEMVEQGQRAVLLFVVQHSGIKSVQAATHIDAEYAELLSKAYHKGVEIIAYSTDSSPLGASLVKSCPVRL
>Mature_234_residues
MEFSPAFETGVLVQRYKRFLTDITLDNGEQVTIHCPNTGSMKNCLFPGEKVWFSTSDNPKRKYSRTWELAQTPEGHIIGI
NTGRANALAEEAIHAGVITELQGYHSLRREVKYGSENSRIDILLEDTKKPNCYIEVKSCTLLEEGQGYFPDAVTARGQKH
LRELMEMVEQGQRAVLLFVVQHSGIKSVQAATHIDAEYAELLSKAYHKGVEIIAYSTDSSPLGASLVKSCPVRL

Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]

COG id: COG1489

COG function: function code R; DNA-binding protein, stimulates sugar fermentation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sfsA family

Homologues:

Organism=Escherichia coli, GI1786340, Length=234, Percent_Identity=57.2649572649573, Blast_Score=283, Evalue=7e-78,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): SFSA_SHEPA (A8H0D9)

Other databases:

- EMBL:   CP000851
- RefSeq:   YP_001500561.1
- STRING:   A8H0D9
- GeneID:   5661098
- GenomeReviews:   CP000851_GR
- KEGG:   spl:Spea_0699
- NMPDR:   fig|398579.3.peg.616
- eggNOG:   COG1489
- HOGENOM:   HBG655520
- OMA:   NTGSMLN
- ProtClustDB:   PRK00347
- BioCyc:   SPEA398579:SPEA_0699-MONOMER
- HAMAP:   MF_00095
- InterPro:   IPR005224
- TIGRFAMs:   TIGR00230

Pfam domain/function: PF03749 SfsA

EC number: NA

Molecular weight: Translated: 26118; Mature: 26118

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFSPAFETGVLVQRYKRFLTDITLDNGEQVTIHCPNTGSMKNCLFPGEKVWFSTSDNPK
CCCCCCHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCH
RKYSRTWELAQTPEGHIIGINTGRANALAEEAIHAGVITELQGYHSLRREVKYGSENSRI
HHHHHCCHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
DILLEDTKKPNCYIEVKSCTLLEEGQGYFPDAVTARGQKHLRELMEMVEQGQRAVLLFVV
EEEEECCCCCCEEEEEECEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEEEEE
QHSGIKSVQAATHIDAEYAELLSKAYHKGVEIIAYSTDSSPLGASLVKSCPVRL
ECCCCCHHHHHHHCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MEFSPAFETGVLVQRYKRFLTDITLDNGEQVTIHCPNTGSMKNCLFPGEKVWFSTSDNPK
CCCCCCHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCH
RKYSRTWELAQTPEGHIIGINTGRANALAEEAIHAGVITELQGYHSLRREVKYGSENSRI
HHHHHCCHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
DILLEDTKKPNCYIEVKSCTLLEEGQGYFPDAVTARGQKHLRELMEMVEQGQRAVLLFVV
EEEEECCCCCCEEEEEECEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEEEEE
QHSGIKSVQAATHIDAEYAELLSKAYHKGVEIIAYSTDSSPLGASLVKSCPVRL
ECCCCCHHHHHHHCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA