| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is sfsA
Identifier: 157960527
GI number: 157960527
Start: 859010
End: 859714
Strand: Reverse
Name: sfsA
Synonym: Spea_0699
Alternate gene names: 157960527
Gene position: 859714-859010 (Counterclockwise)
Preceding gene: 157960530
Following gene: 157960526
Centisome position: 16.61
GC content: 46.67
Gene sequence:
>705_bases ATGGAATTTAGTCCCGCTTTCGAAACTGGCGTATTAGTCCAACGCTATAAACGTTTTTTAACTGATATCACCTTAGATAA TGGTGAGCAGGTCACGATTCATTGCCCCAATACGGGCTCGATGAAGAACTGCTTATTTCCCGGTGAAAAAGTCTGGTTCT CAACCTCTGATAATCCAAAGCGTAAATACAGCCGAACCTGGGAGTTAGCCCAAACCCCAGAAGGCCACATCATTGGCATC AATACTGGCCGCGCCAATGCACTGGCTGAAGAGGCAATTCACGCAGGCGTCATTACTGAGCTACAGGGCTATCATTCTCT GCGCCGAGAAGTGAAATACGGCAGTGAAAACAGCCGCATCGATATCTTGCTTGAAGATACAAAAAAGCCTAACTGCTATA TAGAAGTCAAAAGTTGTACTTTATTAGAAGAGGGTCAAGGCTACTTCCCTGACGCCGTGACCGCGCGAGGGCAAAAACAT CTACGCGAACTCATGGAAATGGTGGAGCAAGGACAACGTGCCGTATTGCTATTTGTTGTTCAGCATTCGGGCATAAAAAG TGTCCAAGCTGCGACGCATATCGATGCCGAATATGCCGAATTACTCAGTAAAGCCTATCACAAAGGTGTCGAGATAATAG CCTATAGCACCGACTCATCGCCTTTGGGAGCAAGTCTGGTCAAATCCTGTCCGGTTAGGCTTTAA
Upstream 100 bases:
>100_bases CCAAATCTTTATACTGATTGGTATAAATAGCAGCCAGCAGCCCCACAGCTGGGTAGAATTTTGTTAACCTACAACAAACT AATTAACAGCTCATGACTCA
Downstream 100 bases:
>100_bases ATCAGAAGATAGGGTTGAAATTGTTCGTAATAGCGGACATAGTCAAAGAATAGACCCCGATTAACACAAATTATTTGCCT AGTATAAAGCTTTCTGGTAT
Product: sugar fermentation stimulation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MEFSPAFETGVLVQRYKRFLTDITLDNGEQVTIHCPNTGSMKNCLFPGEKVWFSTSDNPKRKYSRTWELAQTPEGHIIGI NTGRANALAEEAIHAGVITELQGYHSLRREVKYGSENSRIDILLEDTKKPNCYIEVKSCTLLEEGQGYFPDAVTARGQKH LRELMEMVEQGQRAVLLFVVQHSGIKSVQAATHIDAEYAELLSKAYHKGVEIIAYSTDSSPLGASLVKSCPVRL
Sequences:
>Translated_234_residues MEFSPAFETGVLVQRYKRFLTDITLDNGEQVTIHCPNTGSMKNCLFPGEKVWFSTSDNPKRKYSRTWELAQTPEGHIIGI NTGRANALAEEAIHAGVITELQGYHSLRREVKYGSENSRIDILLEDTKKPNCYIEVKSCTLLEEGQGYFPDAVTARGQKH LRELMEMVEQGQRAVLLFVVQHSGIKSVQAATHIDAEYAELLSKAYHKGVEIIAYSTDSSPLGASLVKSCPVRL >Mature_234_residues MEFSPAFETGVLVQRYKRFLTDITLDNGEQVTIHCPNTGSMKNCLFPGEKVWFSTSDNPKRKYSRTWELAQTPEGHIIGI NTGRANALAEEAIHAGVITELQGYHSLRREVKYGSENSRIDILLEDTKKPNCYIEVKSCTLLEEGQGYFPDAVTARGQKH LRELMEMVEQGQRAVLLFVVQHSGIKSVQAATHIDAEYAELLSKAYHKGVEIIAYSTDSSPLGASLVKSCPVRL
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family
Homologues:
Organism=Escherichia coli, GI1786340, Length=234, Percent_Identity=57.2649572649573, Blast_Score=283, Evalue=7e-78,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): SFSA_SHEPA (A8H0D9)
Other databases:
- EMBL: CP000851 - RefSeq: YP_001500561.1 - STRING: A8H0D9 - GeneID: 5661098 - GenomeReviews: CP000851_GR - KEGG: spl:Spea_0699 - NMPDR: fig|398579.3.peg.616 - eggNOG: COG1489 - HOGENOM: HBG655520 - OMA: NTGSMLN - ProtClustDB: PRK00347 - BioCyc: SPEA398579:SPEA_0699-MONOMER - HAMAP: MF_00095 - InterPro: IPR005224 - TIGRFAMs: TIGR00230
Pfam domain/function: PF03749 SfsA
EC number: NA
Molecular weight: Translated: 26118; Mature: 26118
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFSPAFETGVLVQRYKRFLTDITLDNGEQVTIHCPNTGSMKNCLFPGEKVWFSTSDNPK CCCCCCHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCH RKYSRTWELAQTPEGHIIGINTGRANALAEEAIHAGVITELQGYHSLRREVKYGSENSRI HHHHHCCHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE DILLEDTKKPNCYIEVKSCTLLEEGQGYFPDAVTARGQKHLRELMEMVEQGQRAVLLFVV EEEEECCCCCCEEEEEECEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEEEEE QHSGIKSVQAATHIDAEYAELLSKAYHKGVEIIAYSTDSSPLGASLVKSCPVRL ECCCCCHHHHHHHCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHCCCCC >Mature Secondary Structure MEFSPAFETGVLVQRYKRFLTDITLDNGEQVTIHCPNTGSMKNCLFPGEKVWFSTSDNPK CCCCCCHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCH RKYSRTWELAQTPEGHIIGINTGRANALAEEAIHAGVITELQGYHSLRREVKYGSENSRI HHHHHCCHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE DILLEDTKKPNCYIEVKSCTLLEEGQGYFPDAVTARGQKHLRELMEMVEQGQRAVLLFVV EEEEECCCCCCEEEEEECEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEEEEE QHSGIKSVQAATHIDAEYAELLSKAYHKGVEIIAYSTDSSPLGASLVKSCPVRL ECCCCCHHHHHHHCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA