| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960468
Identifier: 157960468
GI number: 157960468
Start: 791003
End: 791557
Strand: Reverse
Name: 157960468
Synonym: Spea_0640
Alternate gene names: NA
Gene position: 791557-791003 (Counterclockwise)
Preceding gene: 157960473
Following gene: 157960460
Centisome position: 15.3
GC content: 49.19
Gene sequence:
>555_bases TTGGAAGCTCTACTTGCCTCGACGTTTACCGTCGCTATTGCCGAAATTGGCGATAAAACTCAACTACTGGCGCTTATCTT AGCCGCCCGTTTTAAAAATAAGACTGCCATCATACTCGGCATATTCCTATCGACCTTAGTTAACCATTTTGCTGCCGCCT GGCTTGGGCAATGGGCTATCTCTTGGATCAGCCCAGAAATGGGACGCTATCTAGTAGCCGCCTCTTTCTTTGCTATCGCA TTGTGGGTGCTTATTCCTGATAAAGTCGATGCCGAAGAGAGCCGTTTCTATGCCATGGGGCCATTCTTAGCCACATTTAT TCTATTCTTCATTGCCGAGATGGGCGACAAGACTCAGATAGCCACAGTGGTGCTATCGGCTAAATATGATGCTCTGGCCA TGGTGGTGATGGGCACCACCTTAGGCATGTTGATTGCAAACGTCCCTGTAGTCATAGCCGGACACTTTAGCGCCGAAAAG CTGCCGATGAATTGGATCCATCGCGGCTGCGCCGTCTTGTTTGCCCTACTGGGTGTAGCGACCTTGGTTTTTTAA
Upstream 100 bases:
>100_bases AGCTGTTGAGTTCGCCCAGCAAGACCTGAGCACCGCACCTCTCTATTTGGGGAAGAGGTTCTGTGCTTAGAATTTGCTAT CCCCATTAAAGGATCCACAC
Downstream 100 bases:
>100_bases AGAAGGGACTAGATTTAAAGGAAGGTTCTAGGTTCTAGGTTCTAGGTTCTAGGTTCTAGGTTCTAGGTTCTAGGTTCTAG GTTCTAGGTTCTAGGTTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MEALLASTFTVAIAEIGDKTQLLALILAARFKNKTAIILGIFLSTLVNHFAAAWLGQWAISWISPEMGRYLVAASFFAIA LWVLIPDKVDAEESRFYAMGPFLATFILFFIAEMGDKTQIATVVLSAKYDALAMVVMGTTLGMLIANVPVVIAGHFSAEK LPMNWIHRGCAVLFALLGVATLVF
Sequences:
>Translated_184_residues MEALLASTFTVAIAEIGDKTQLLALILAARFKNKTAIILGIFLSTLVNHFAAAWLGQWAISWISPEMGRYLVAASFFAIA LWVLIPDKVDAEESRFYAMGPFLATFILFFIAEMGDKTQIATVVLSAKYDALAMVVMGTTLGMLIANVPVVIAGHFSAEK LPMNWIHRGCAVLFALLGVATLVF >Mature_184_residues MEALLASTFTVAIAEIGDKTQLLALILAARFKNKTAIILGIFLSTLVNHFAAAWLGQWAISWISPEMGRYLVAASFFAIA LWVLIPDKVDAEESRFYAMGPFLATFILFFIAEMGDKTQIATVVLSAKYDALAMVVMGTTLGMLIANVPVVIAGHFSAEK LPMNWIHRGCAVLFALLGVATLVF
Specific function: Unknown
COG id: COG2119
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19973; Mature: 19973
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEALLASTFTVAIAEIGDKTQLLALILAARFKNKTAIILGIFLSTLVNHFAAAWLGQWAI CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SWISPEMGRYLVAASFFAIALWVLIPDKVDAEESRFYAMGPFLATFILFFIAEMGDKTQI HHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHH ATVVLSAKYDALAMVVMGTTLGMLIANVPVVIAGHFSAEKLPMNWIHRGCAVLFALLGVA HHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH TLVF HHCC >Mature Secondary Structure MEALLASTFTVAIAEIGDKTQLLALILAARFKNKTAIILGIFLSTLVNHFAAAWLGQWAI CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SWISPEMGRYLVAASFFAIALWVLIPDKVDAEESRFYAMGPFLATFILFFIAEMGDKTQI HHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHH ATVVLSAKYDALAMVVMGTTLGMLIANVPVVIAGHFSAEKLPMNWIHRGCAVLFALLGVA HHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH TLVF HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA