| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960454
Identifier: 157960454
GI number: 157960454
Start: 769086
End: 770192
Strand: Reverse
Name: 157960454
Synonym: Spea_0625
Alternate gene names: NA
Gene position: 770192-769086 (Counterclockwise)
Preceding gene: 157960455
Following gene: 157960453
Centisome position: 14.88
GC content: 49.5
Gene sequence:
>1107_bases ATGAAGCTGTATCCCTGTTTACTGCTACTTACCTTACTTTACGGCTGTGACTCAGAACCAAACAAGTCACCTACAGGTAT GGGGCAACGACTCGATGGAGACACCACCCACTACACTCCTGTCGTTCCGGGAAAAACACTCTCCTTCCCAACTGACCACA TGGCCCATGACTACTTCAGGCAGGAGTGGTGGTATTTGACTGCCAATCTAACAACCGAAACAGGAGAATCACTCGGCTTA CAATGGACGCAATTTCGTATCGCTCTATCCCCTCCAGATCCTGATGAAAAGGCAAGCACACAAGACTTAGCCCAATCGAG TTGGCAGACACAGCAGCTTTATATGTCCCATAGCGCGATCACCACACAAACCCAGCACCTCGCAGCAGAAAGATGGTCTA GAGGCCATCCATTTCTTGCTGGTACTCAAACATCGCCGCTGGTGATTAAGCTAGATGATTGGCAATGGCGTAGCAATGAC GAGCAGTTATTTCCTGCCACCTTATCCGTAGCTACCGATAGCTTTAGCTACCAGCTCAAACTCAATAGTCAGGCTCCCTT TCAGCTTCAAGGCGATAACGGCTATAGCCGAAAAAATGCCGCCGGCACAGTGGCGAGCTATTATTATAGCCAGCCTTTTA TCAAGGTCAGTGGCACTGTCGAGCGAGATGGCAAAACAATTCAGGTGAACGGTGATGGCTGGCTCGATAGAGAGTGGAGC TCGCAATTTCTAGCTAAAGCTCAGCAAGGCTGGGATTGGTTCGCCTTAAGACTCGATGACGGCTCGGCGCTAATGCTGTT TCAACTGAGAGACTCCAGCGGTGACAAGCTGCATTTCTATAGCGGTCGGCGCATGTTTCCTGATGGTCGCGGCCACAATA TCACTAATAAGCAGATCTCTATGACGGCAATAGACTGGCAACAAATGCAATCAGGCCATTACCCAACTGCGTGGCAGATT GCTATTCCGTCAGAAAATATCCAGCTAACGACTCAGGCACTCAATGCTGATTCCAGCATGCCTCTGTCTATCCCCTACTG GGAAGGCCCTATCAGAATAAGTGGCAGTCATAGTGGCATGGGTTACATGGAACTCACCGGCTATTAA
Upstream 100 bases:
>100_bases TATTGGTGATCGCCCTCGTTGTCAGTGCCTTCGCCGTGGTTCTGCCGCTACTATGGCAGACACGCCGCCCATTGATCAGC AGCTTGCAGCAGGAGGCATT
Downstream 100 bases:
>100_bases ATAAAATTTAATAATACATTTACCTATTTATTGGTATAACCTCTAGCCTATTACACCTTGCAAACAAGATATAAACAAAA ATCATTATCAAGAAGTAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Hydrolase; Hydrolase; Lipoprotein; ABC Transporter Type C Secreted Protein; Hydroxyneurosporene Synthase; ABC Transporter Lipoprotein; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Attachment Protein; Hydroxymethylglutaryl-Co A Reductase
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MKLYPCLLLLTLLYGCDSEPNKSPTGMGQRLDGDTTHYTPVVPGKTLSFPTDHMAHDYFRQEWWYLTANLTTETGESLGL QWTQFRIALSPPDPDEKASTQDLAQSSWQTQQLYMSHSAITTQTQHLAAERWSRGHPFLAGTQTSPLVIKLDDWQWRSND EQLFPATLSVATDSFSYQLKLNSQAPFQLQGDNGYSRKNAAGTVASYYYSQPFIKVSGTVERDGKTIQVNGDGWLDREWS SQFLAKAQQGWDWFALRLDDGSALMLFQLRDSSGDKLHFYSGRRMFPDGRGHNITNKQISMTAIDWQQMQSGHYPTAWQI AIPSENIQLTTQALNADSSMPLSIPYWEGPIRISGSHSGMGYMELTGY
Sequences:
>Translated_368_residues MKLYPCLLLLTLLYGCDSEPNKSPTGMGQRLDGDTTHYTPVVPGKTLSFPTDHMAHDYFRQEWWYLTANLTTETGESLGL QWTQFRIALSPPDPDEKASTQDLAQSSWQTQQLYMSHSAITTQTQHLAAERWSRGHPFLAGTQTSPLVIKLDDWQWRSND EQLFPATLSVATDSFSYQLKLNSQAPFQLQGDNGYSRKNAAGTVASYYYSQPFIKVSGTVERDGKTIQVNGDGWLDREWS SQFLAKAQQGWDWFALRLDDGSALMLFQLRDSSGDKLHFYSGRRMFPDGRGHNITNKQISMTAIDWQQMQSGHYPTAWQI AIPSENIQLTTQALNADSSMPLSIPYWEGPIRISGSHSGMGYMELTGY >Mature_368_residues MKLYPCLLLLTLLYGCDSEPNKSPTGMGQRLDGDTTHYTPVVPGKTLSFPTDHMAHDYFRQEWWYLTANLTTETGESLGL QWTQFRIALSPPDPDEKASTQDLAQSSWQTQQLYMSHSAITTQTQHLAAERWSRGHPFLAGTQTSPLVIKLDDWQWRSND EQLFPATLSVATDSFSYQLKLNSQAPFQLQGDNGYSRKNAAGTVASYYYSQPFIKVSGTVERDGKTIQVNGDGWLDREWS SQFLAKAQQGWDWFALRLDDGSALMLFQLRDSSGDKLHFYSGRRMFPDGRGHNITNKQISMTAIDWQQMQSGHYPTAWQI AIPSENIQLTTQALNADSSMPLSIPYWEGPIRISGSHSGMGYMELTGY
Specific function: Unknown
COG id: COG5621
COG function: function code R; Predicted secreted hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41568; Mature: 41568
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLYPCLLLLTLLYGCDSEPNKSPTGMGQRLDGDTTHYTPVVPGKTLSFPTDHMAHDYFR CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEECCCCHHHHHHHHH QEWWYLTANLTTETGESLGLQWTQFRIALSPPDPDEKASTQDLAQSSWQTQQLYMSHSAI CEEEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHCCCHHHEEECCCHH TTQTQHLAAERWSRGHPFLAGTQTSPLVIKLDDWQWRSNDEQLFPATLSVATDSFSYQLK HHHHHHHHHHHHCCCCCEEECCCCCCEEEEEECCEECCCCCEECEEEEEEEECCEEEEEE LNSQAPFQLQGDNGYSRKNAAGTVASYYYSQPFIKVSGTVERDGKTIQVNGDGWLDREWS ECCCCCEEEECCCCCCCCCCCCCEEEHHHCCCEEEEECEEECCCCEEEECCCCCCCCHHH SQFLAKAQQGWDWFALRLDDGSALMLFQLRDSSGDKLHFYSGRRMFPDGRGHNITNKQIS HHHHHHHHCCCEEEEEEECCCCEEEEEEEECCCCCEEEEECCCEECCCCCCCCCCCCEEE MTAIDWQQMQSGHYPTAWQIAIPSENIQLTTQALNADSSMPLSIPYWEGPIRISGSHSGM EEEECHHHHHCCCCCCEEEEEECCCCEEEEEEEECCCCCCCEECCCCCCCEEECCCCCCC GYMELTGY EEEEEECC >Mature Secondary Structure MKLYPCLLLLTLLYGCDSEPNKSPTGMGQRLDGDTTHYTPVVPGKTLSFPTDHMAHDYFR CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEECCCCHHHHHHHHH QEWWYLTANLTTETGESLGLQWTQFRIALSPPDPDEKASTQDLAQSSWQTQQLYMSHSAI CEEEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHCCCHHHEEECCCHH TTQTQHLAAERWSRGHPFLAGTQTSPLVIKLDDWQWRSNDEQLFPATLSVATDSFSYQLK HHHHHHHHHHHHCCCCCEEECCCCCCEEEEEECCEECCCCCEECEEEEEEEECCEEEEEE LNSQAPFQLQGDNGYSRKNAAGTVASYYYSQPFIKVSGTVERDGKTIQVNGDGWLDREWS ECCCCCEEEECCCCCCCCCCCCCEEEHHHCCCEEEEECEEECCCCEEEECCCCCCCCHHH SQFLAKAQQGWDWFALRLDDGSALMLFQLRDSSGDKLHFYSGRRMFPDGRGHNITNKQIS HHHHHHHHCCCEEEEEEECCCCEEEEEEEECCCCCEEEEECCCEECCCCCCCCCCCCEEE MTAIDWQQMQSGHYPTAWQIAIPSENIQLTTQALNADSSMPLSIPYWEGPIRISGSHSGM EEEECHHHHHCCCCCCEEEEEECCCCEEEEEEEECCCCCCCEECCCCCCCEEECCCCCCC GYMELTGY EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA