Definition | Halobacterium sp. NRC-1 chromosome, complete genome. |
---|---|
Accession | NC_002607 |
Length | 2,014,239 |
Click here to switch to the map view.
The map label for this gene is opuD
Identifier: 15790174
GI number:
Start: 824703
End: 826337
Strand: Reverse
Name: opuD
Synonym: VNG1077G
Alternate gene names: NA
Gene position: NA
Preceding gene: 15790175
Following gene: 15790173
Centisome position: NA
GC content: NA
Gene sequence:
>1635_bases ATGAGTCGGCGCGTATGGTACCTTCTTGGCCTCGAAGACGCGACGTGGCCCGAGCGCGCGCTGTTCGCGGTGACGATGGC CGCGATGCTCGCGCTTGCGGTCGCCGGGTTCCGGCGGCCGACGCAGCTCAGCACCGTGTTGAACGGGGCCTTCGATTGGG TGTTGCGGTACTTCGGCTGGTGGTTCATCCTGCTTGGGTTCGTGTTGCTGGTGCTCGTGCTCGGGGTGACGTGGTCGCGG TACGGCCGCCTCCGGATCGGCGGCCCCGACGCCGAACCCGAGTTCGACACGTTCTCCTGGCTGTCGATGGTGTTCACCGT GGGGTTCGGCGCGTCCATCCTCATCTGGGGGGTTGGCGAACCGGTTTCGATCGTCCAGCAGCCGCCGCCGGAGCCGTGGC CGGTCGGCGGGGCGTCGGCGAAATCCCTGGCGCTCGCGTTCATGTTCGTTCACGAGGTGTTCCCCGGGCTGGCGATGTGG TATCTCCCCGTCGCCCTCGCGTTCGGGATCATCGTCTACACGCGCGGCATCGGCGAGTACAAGGTGTCGACGATGCTGGC CGGCATCATGCCCGCGGGCGACCACCCCGTCGTGCTCTGGGCGGTTGACGTTGCGGCCATCATCGCCACCATCGGCGGCA TTGCGACGACGCTGGGGTTCAGCTCACAGACCATGGCGGCCATCCTCGGGGGTGTGTTCGGCCTGCAGTCGGCCTGGTTG ACCTACGGGATCTTCGCCGCGATCGGCGCCGTCTTCCTGGTCGACGTGTGGCTGGGGCTGCGCTCGGGCATCCGGAACGC CGCCCGCGCGACCATGCTGCTCATCGGGGTTGCGATGGCGGTCCTCGTCGTCGTCGGGCCGACGCTGTTCACGTTCCAAC TCGGCCTCGACGCCACCGGCGTCTGGCTGAACAACGTCGTTCGACTGATGCTGTACACCGACCCCACCGCGGCCGGCCAC TGGGCGGCGAACTGGACGGGCTTCTGGTGGGCGTGGTGGGCGGCCTGGAGCATCTTCGTCGGGAGCTTCGTCGCGCGCGT CTCGAAAGGCCGGACCGTCCGCGAGATGTTCATCGTGCTCGTGGTCGCGCCCGGCGTCCTGAGCTGGGTGCAACACACCC TCATCGGCGGCTGGGTGTTGGCCCCCGACTACGTCGGCCCGGTCGGCAACGCGCTGTCCGCCAACGGCATCCCCGCGGCC ATCGCCCGCGCCCTGTCGATCACGCCCTACGGGTCGGTGCTCGCGTTGCTGTTCGTGTTGGTGATCGCGGGCTACATCAT CACCTCCCTGGATTCGGCGGTGTTCATGATCGCCGCCATCACGCTCGGCGACGAGGACCCCAATCCCCGCAACCGCGCCT GCTGGGGGCTGTTGCTCGCCGCGTTCGGCGTGATGAGCCTGGAGCTGTCCAGCTTCGAAGCCATCGAGGCGCTGTCGCCA GTGCTCGCGTTGCCGTTCACGCTGTTCCTGCTGGTGATCGTGTACGCCAGCTACGTCGCCGCCCGGGAGTACGCGCGTGA CCGCGACGACGTTGCGGTCTCGCCCGGCGGGTTGTTGTCCTCCCGATCGTCGGCGTCGGACACCGACCCGGAAGCAGGGA GCGGCACGGACGCCGCGCCCACCGGCGACGACTGA
Upstream 100 bases:
>100_bases GCGCCAATGCAGCAGCGAGCCGCCAGGCTCGCCGCGCACGCGCTCCGCGTTGCTCGCACGGGACCGGTTCCAATGCCATC ACGCGTCGCCAGTGGCGTCG
Downstream 100 bases:
>100_bases CCGCCTGGCTGCCCCAACCGCCACCCCTTAGACGACCCTCCCCGTACTGGAGGGCGATGACACAGACGGCCGACGTTTCA CGGCAGCGCGCGTGGCTGAT
Product: glycine betaine transporter
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>544_residues MSRRVWYLLGLEDATWPERALFAVTMAAMLALAVAGFRRPTQLSTVLNGAFDWVLRYFGWWFILLGFVLLVLVLGVTWSR YGRLRIGGPDAEPEFDTFSWLSMVFTVGFGASILIWGVGEPVSIVQQPPPEPWPVGGASAKSLALAFMFVHEVFPGLAMW YLPVALAFGIIVYTRGIGEYKVSTMLAGIMPAGDHPVVLWAVDVAAIIATIGGIATTLGFSSQTMAAILGGVFGLQSAWL TYGIFAAIGAVFLVDVWLGLRSGIRNAARATMLLIGVAMAVLVVVGPTLFTFQLGLDATGVWLNNVVRLMLYTDPTAAGH WAANWTGFWWAWWAAWSIFVGSFVARVSKGRTVREMFIVLVVAPGVLSWVQHTLIGGWVLAPDYVGPVGNALSANGIPAA IARALSITPYGSVLALLFVLVIAGYIITSLDSAVFMIAAITLGDEDPNPRNRACWGLLLAAFGVMSLELSSFEAIEALSP VLALPFTLFLLVIVYASYVAAREYARDRDDVAVSPGGLLSSRSSASDTDPEAGSGTDAAPTGDD
Sequences:
NA
Specific function: NA
COG id: COG1292
COG function: function code M; Choline-glycine betaine transporter
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA