Definition | Halobacterium sp. NRC-1 chromosome, complete genome. |
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Accession | NC_002607 |
Length | 2,014,239 |
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The map label for this gene is gspE2
Identifier: 15789975
GI number:
Start: 623369
End: 625054
Strand: Reverse
Name: gspE2
Synonym: VNG0823G
Alternate gene names: NA
Gene position: NA
Preceding gene: 15789976
Following gene: 15789974
Centisome position: NA
GC content: NA
Gene sequence:
>1686_bases ATGGTCACACGACTGAACGCTCCAGTAGGAGCGATGGCTGGGGATCTCTTCGCGGGCCTGGATGGCGGGTTTGATGCGCT ACAGCGGCGCGCGAGCCGGATCGTCGAGGTGTTGCGCGGAACCGCCGTCGACGTTCCACCGTACGACCCACAGGCCCACG GCCCGCTGGTCGAGTTTGACGGGGTGGCGGACTACGAGGAGGTCGACCGGTACTGGGTCAACGCCCCCTACGCGTTCGTG TTCATCGGGTTCGACGCCGAATCCGACACCCACTACTATCACGTCGTGGAGCCACACCTGGATGACTTCGAGCAGACGGT GTTGGACCAGCTCTACGACGACATCCGGGACGCGCTCATCTACGATGCCACCACCGATCCCGACGACCGCGAGGCGGTCC TGATCGCGCAGATGCAGCGCCTCCTCTCGGAGTACAGCATCGACGTGACGCCGAACGCGTTCCACCGGCTGTTTTACTAC TTACACCGCACCTTCGAGGGGTTCGAGAAGCTCGACCCCGTGATGCAGGACCCCCACATCGAGGACGTGTCGTGCGACGG CTACGGGCTGCCGCTGTTCGTCTACCACACCGACTACACGGACATCGAGACCAACATCACCTACGAGCAACAGGAGTTGG ACAGCTTCGTCGTGCGCCTCGCCCAGCAGTCCGGCCGCCACATCTCCATCGGCGATCCGGTCACCGAAACCACCCTGCCG GACGGATCGCGCGCGGAGCTCGCGCTCGGCGAGGAGGTCACCCCGAGGGGGTCGGCGTTCACCATCCGGAAGTACAGCGA GGAGCCGTTCACGCCCGCAACCCTGGTCGACTACGACACGTTCAGCCTCGACCAGATGGCGTACCTCTGGCTGGCCATCG AATCCAACAAGAGCCTGCTTTTCGCGGGCGGTACCGCCTCGGGGAAGACCACGTCGATGAACGCCGTGTCGATGTTCGTG CCGCCGCGGGCGAAGATCCTCACCATCGAGGACACCCGCGAGCTTGCGCTGTACCACGACAACTGGCTGTCGTCGGTGAC CCGGGGGGCGGACGGCGGCGGCGGAGACACCATCACGATGTACGATCTGCTGCGGTCGGCGCTCCGCCACCGCCCCGAGT ACATCATCGTCGGCGAGGTGCGCGGCGAGGAAGCGATGACGCTGTTCCAGGCGATGAACACGGGCCACACGACGTATTCG ACGATGCACGCCGACAGCGTGCAGACGGTCATCAACCGCCTCGAAAACGACCCCATCAACGTCCCGCGGGCGATGATCCA GAGCCTGGATATCCTGTGCGTGCAGACGCTCACGCACGTCGGTGACGAGCGCGTTCGCCGCAGCAGCGTGATCGCGGAGA TCGAGGGGATCGACCAGCGCACCGGCGACCTCGACTACTCCACGGCGTTCGAATGGGACCCCACGCGCGACGACTTCGAG CAGCGCGACTCGAACGTCCTCGACGAGATCCAGGACGAGCGCGGGTGGTCGCGAAGCGACCTGCTCCGGGAGCTCAGGAA CCGCAAGCGCGTCCTCCAGTATCTCGTCGAGCAGGACGTGACCGACTACCGCCGGTTCACGGCCCTGATCAACGAGTACT ACGCGCAGCCCGAGCGCGTGGTCGCCCGCGTCACCGACGCGCTCGATTCGGACGTCGCGGCCGCCGCGCCGGGGGTCGTG GAGTGA
Upstream 100 bases:
>100_bases CCGCGCCCCACGCGCCGTCGATCGCGCGCACGACCCCGGTGAGACCGGTGTTTCGAACGCGGGTGACTGAGATGCGTGCC ACAGCGCCGGACAGCTTTTT
Downstream 100 bases:
>100_bases TCACGGTGGCCGTGTGGCTGCTGCCGCTGGCCGCGGTGCTGGCAGTCGACTGCGTGGTCGGCGCGGCCGCCATCACCGGC GCGAACCGCGTCGATCGCGT
Product: type II secretion system protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>561_residues MVTRLNAPVGAMAGDLFAGLDGGFDALQRRASRIVEVLRGTAVDVPPYDPQAHGPLVEFDGVADYEEVDRYWVNAPYAFV FIGFDAESDTHYYHVVEPHLDDFEQTVLDQLYDDIRDALIYDATTDPDDREAVLIAQMQRLLSEYSIDVTPNAFHRLFYY LHRTFEGFEKLDPVMQDPHIEDVSCDGYGLPLFVYHTDYTDIETNITYEQQELDSFVVRLAQQSGRHISIGDPVTETTLP DGSRAELALGEEVTPRGSAFTIRKYSEEPFTPATLVDYDTFSLDQMAYLWLAIESNKSLLFAGGTASGKTTSMNAVSMFV PPRAKILTIEDTRELALYHDNWLSSVTRGADGGGGDTITMYDLLRSALRHRPEYIIVGEVRGEEAMTLFQAMNTGHTTYS TMHADSVQTVINRLENDPINVPRAMIQSLDILCVQTLTHVGDERVRRSSVIAEIEGIDQRTGDLDYSTAFEWDPTRDDFE QRDSNVLDEIQDERGWSRSDLLRELRNRKRVLQYLVEQDVTDYRRFTALINEYYAQPERVVARVTDALDSDVAAAAPGVV E
Sequences:
NA
Specific function: NA
COG id: COG0630
COG function: function code NU; Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA