Definition Rickettsia rickettsii str. 'Sheila Smith', complete genome.
Accession NC_009882
Length 1,257,710

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The map label for this gene is secD

Identifier: 157828752

GI number:

Start: 832661

End: 834217

Strand: Direct

Name: secD

Synonym: A1G_04940

Alternate gene names: NA

Gene position: NA

Preceding gene: 157828751

Following gene: 157828753

Centisome position: NA

GC content: NA

Gene sequence:

>1557_bases
GTGCAAAATCTTCCTAAGTGGAAAATTTTTCTTTCAATTATATGTACGGTTTTTGCGGTTATTTGTGCCTTACCTAATTT
CATGCAGGTACACTCTAAGTTTCTACCTCATGATTCAGTAAATCTAGGACTTGATCTTAGAGGAGGAGCCCATTTATTAC
TCGATGTTGATTTTGACACCTACTTAAATGATTCAATGGAAAATCTTGCCGACACTTTACGCAAAAATTTTCGTGAGGAT
AAAATCGGCTATAAAAATCTGTTAGTTAGACAAAATAGCATTCAATTAGAAGTAAGATCGCCTGAGAAATTAAAGCCGTT
AAAGAAAATAATTAATAAAATCGATCCAGAAATTATCGCTGAAGTAAATGAAAATAAAATAAAGCTTAGCTACAGCGAAT
CTAGATTAAATGACTTACTTAATAAGGTCGTAGACCAATCTATTGAGATCGTTCGCATGAGAGTTGATAGTACCGGCACT
AAAGAGCCGACCCTACAGAAACAAGGCGATAAGCATATATTACTGCAAGTTCCCGGTGAAGAAAATCCCTCTTACCTGAA
GAATATATTAGGGAAAACTGCAAAGCTAACTTTTCATTTAGTTGATGAAAATGCCAATATCGAAGAAGCGGTAAAAGGAC
ATGTTCCAGTAGGTTCAATGCTAGTTAAGGGAGATAACGAAAGTCATGGGGAGTATTATGTCGTTATAAAGAAAAAAGTT
GTTTTGGGTGGGGATAAGCTTACAACCGCTTCAGCTTCTTTTGACCAAAATTCGCAAGCGGTAGTTGCTTTTTCTTTCAA
CAATTTAGGTAGTAAAATATTTGGTGCAATAACTAAAAATAATACCGGTAAACGCCTTGCTATAGTTTTAGACAATAAAT
TACTAAGTGCTCCAATGATAAACGGAGCGATTATGGGCGGAAGCGGTATAATAACAGGAAATTTTACCGTTGAGTCGGCA
AATGAGCTTGCACTATTATTGCGAGCCGGTTCGCTTCCTGCCCCACTGAGAATTATTGAAGAGAGAAGTATAGGTCCAAA
TTTGGGTGCTGATTCTATAGAGTCGGGCAAAAAGGCAGGACTTATAGGATTTATAGCAGTGTGTGTATTTATGGTTTGGT
CTTACGGTGTGCTTGGTTTATTTGCCAATATAGCCTTAAGCCTTGCATTGTTATATATTTTAGCTTTACTTTCACTTTTC
CAAGCTACTTTAACTCTGCCGGGAATTGCAGGAATAATACTCACTATGGGTATGGCTGTTGATGCTAATGTATTGATTTA
CGAAAGAATTAAAGAGGAACTGCATAAAGGAGTGTCTAATCTTTATGCTATTAGAACCGGTTTTGAATCTGCGTTTGCCA
CTATCCTTGATGCTAACCTAACTACTTTAATCGTTGCTTTTTTACTTTATATATTTGGAGTAGGTGCAATCAAAGGTTTT
GCCGTTGCATTAACGATCGGGATTATATCTTCAATGTTTTCGGCGATTATCATTACTAAATTGTTAATAGATATTTGGGT
ACAATATTTTAAACCTAAAAAATTAGGGCTTGTGTAA

Upstream 100 bases:

>100_bases
GTACGTATTAAAGTTTTAAAAAGTGCTATTATCGATATAACTAGTCGTACAAAAGAAGTAGCAGTAAAAAAAGAAAACAA
AAAAAATAAGAAGGTAAGCG

Downstream 100 bases:

>100_bases
AAGAGTAGACTTTGTTGTATGGTCTTTTTATGTCATTCCCACGAAAGCGGGAATCCAGTAACCTTTAATGTCATCCCGCA
ACTTGATTGCGGGATCTCAG

Product: preprotein translocase subunit SecD

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>518_residues
MQNLPKWKIFLSIICTVFAVICALPNFMQVHSKFLPHDSVNLGLDLRGGAHLLLDVDFDTYLNDSMENLADTLRKNFRED
KIGYKNLLVRQNSIQLEVRSPEKLKPLKKIINKIDPEIIAEVNENKIKLSYSESRLNDLLNKVVDQSIEIVRMRVDSTGT
KEPTLQKQGDKHILLQVPGEENPSYLKNILGKTAKLTFHLVDENANIEEAVKGHVPVGSMLVKGDNESHGEYYVVIKKKV
VLGGDKLTTASASFDQNSQAVVAFSFNNLGSKIFGAITKNNTGKRLAIVLDNKLLSAPMINGAIMGGSGIITGNFTVESA
NELALLLRAGSLPAPLRIIEERSIGPNLGADSIESGKKAGLIGFIAVCVFMVWSYGVLGLFANIALSLALLYILALLSLF
QATLTLPGIAGIILTMGMAVDANVLIYERIKEELHKGVSNLYAIRTGFESAFATILDANLTTLIVAFLLYIFGVGAIKGF
AVALTIGIISSMFSAIIITKLLIDIWVQYFKPKKLGLV

Sequences:
NA

Specific function: NA

COG id: COG0342

COG function: function code U; Preprotein translocase subunit SecD

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA