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The map label for this gene is recJ [H]

Identifier: 157825818

GI number: 157825818

Start: 676653

End: 678416

Strand: Direct

Name: recJ [H]

Synonym: A1C_03765

Alternate gene names: 157825818

Gene position: 676653-678416 (Clockwise)

Preceding gene: 157825817

Following gene: 157825819

Centisome position: 54.97

GC content: 33.16

Gene sequence:

>1764_bases
ATGAAAACACAAACATCTATAAACGGTAAAATCTGGCAGCAGAAACTGATTCACGAAGATATAGTCACCGAGTTATGTCG
TAGTTTCAAAATTAGTGATTTACTTGCTAGGATAGTATCATTAAGAGTAAATAATCTAGAGGAAGTAGAAAATTTTTTGA
TACCGAAAATCAAAAATTTATTACCTGATCCTTTTCATCTACTCGATATGAAAAAGGCTGTAGATAGAACCGTTAAAGCT
ATTTTAAATAATCAAAAAATATGTATCTTTGCCGATTATGATGTAGACGGTGCTACTTCAGCTGCTTTACTTAAAAATGT
CTTTAGAGATTTAAATATAATATGTGATATTTATGTTCCTGATCGTATAGCTGAAGGATATGGTCCGACTCCTTTTGCTA
TGCAAAAAATTAAAGATAAAGATACAGAACTATTAATTACGGTTGACTGCGGTGCTATGGCATACGAAGCCATAAAATAC
GCAAAAGACCTTAACCTTGATGTTATAGTAATCGATCATCATATAGCTACGGAAATATTACCGGATGCAGTAGCGATAGT
CAATCCAAATCGTATTGATGAAAAAAGCGAATATAAACATTTGGCCGCCGTAGGAGTTGCGTTCTTATTTGCAACTGCAA
TATTATCGCATTTAAAGAAACAAAATTATTTCACGCAAACAATGCTTCAGCCTAATCTAATGAAATATCTAGATTTAGTG
GCTCTTGGTACTGTTTGCGATATGATGACATTAACAGGCTTAAATCGTGCATTTGTCTCAAGCGGTTTGAAAGTAATGCA
ACAACGACAAAATATTGGTATTAAAACATTATATGATATGGCAGGACTTAATGAAATACCGAAATGTTATCATTTAGGTT
TTATTTTAGGTCCACGTATCAATGCAGGCGGCAGAGTAGGAAAGTCAAGTTTGGGGGCTAATCTCCTCTCTACTAGTTGT
TCTAATGAAGCAAGTAAATTAGCTGAAGAACTCGAAAAACATAATAATGAGCGTAAAGTAATTGAGTTATTAATGATAGA
AGAGGCAACAGAAATTGCTTTAACTCAACAAGATAGTAGTTTATTATTTATCGTAAAAGAAGGATGGCATCCAGGCGTTA
TAGGAATTGTTGCCGGCAGATTAAAAGAAAAATTTGATAAGCCGGTAGCGGTTGTGGCTTTAAATGACGGGATTGGTAAA
GCTTCATGCCGTTCTATTTTAGGTATTGATTTCGGTGCTGAGATTATCAATGCTAAAAGCAAAGATTTGCTAATAGCAGG
CGGAGGTCATGCTATGGCTGCAGGTTTTACCGTAACTGCTGAAAAATTACAGGAATTGCAGAATTTTTTTAATAATGCTT
TTAGAATTAGTATAAATACACTAGAAAATTATAAGCATGCAGAATATGATATTGATTTAACGGTTGATGGTGTGAATTTC
CATTTAATGGAGGAATTAAACACTTTAGAGCCTTTCGGTCAAGGAAATCATGAGCCTATATTTAAATTCGATGATTTATT
TGTATTAAAAGCATATATCGTTGGAAGTAAGCACATTAAATGTATGCTGGTTCCAAATAAGCGAAGCTTTGGTAATAAAG
CCTTATCTGCTATTGCTTTTAATTCGGTAGGAACTTCATTTGAAGATGTTTTATTAAGCCCTAAAGCAAAAAATATTGCC
GCAATAGGAACGTTAAAAACCAATAATTGGCAAGATAATTATACTATTCAATTAATTATAAAAGATATACTTCTTAGAGA
GTAA

Upstream 100 bases:

>100_bases
TTTTAATTGGATTCAGTGATAAATCGAATTAGATAACACCGAGATATTTTTAGTATAAAAAGATGGATACCGTGGTCAAG
CCACGGTATGACAATGTAAA

Downstream 100 bases:

>100_bases
ATAACATTGCACACATGGATACCTGAACCATCATTGCGAGGCGCCGTAGGCCACTCGGCAATCTAGAAAAAATAATAAAA
AAATTCTGTAAATCAGAATT

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 587; Mature: 587

Protein sequence:

>587_residues
MKTQTSINGKIWQQKLIHEDIVTELCRSFKISDLLARIVSLRVNNLEEVENFLIPKIKNLLPDPFHLLDMKKAVDRTVKA
ILNNQKICIFADYDVDGATSAALLKNVFRDLNIICDIYVPDRIAEGYGPTPFAMQKIKDKDTELLITVDCGAMAYEAIKY
AKDLNLDVIVIDHHIATEILPDAVAIVNPNRIDEKSEYKHLAAVGVAFLFATAILSHLKKQNYFTQTMLQPNLMKYLDLV
ALGTVCDMMTLTGLNRAFVSSGLKVMQQRQNIGIKTLYDMAGLNEIPKCYHLGFILGPRINAGGRVGKSSLGANLLSTSC
SNEASKLAEELEKHNNERKVIELLMIEEATEIALTQQDSSLLFIVKEGWHPGVIGIVAGRLKEKFDKPVAVVALNDGIGK
ASCRSILGIDFGAEIINAKSKDLLIAGGGHAMAAGFTVTAEKLQELQNFFNNAFRISINTLENYKHAEYDIDLTVDGVNF
HLMEELNTLEPFGQGNHEPIFKFDDLFVLKAYIVGSKHIKCMLVPNKRSFGNKALSAIAFNSVGTSFEDVLLSPKAKNIA
AIGTLKTNNWQDNYTIQLIIKDILLRE

Sequences:

>Translated_587_residues
MKTQTSINGKIWQQKLIHEDIVTELCRSFKISDLLARIVSLRVNNLEEVENFLIPKIKNLLPDPFHLLDMKKAVDRTVKA
ILNNQKICIFADYDVDGATSAALLKNVFRDLNIICDIYVPDRIAEGYGPTPFAMQKIKDKDTELLITVDCGAMAYEAIKY
AKDLNLDVIVIDHHIATEILPDAVAIVNPNRIDEKSEYKHLAAVGVAFLFATAILSHLKKQNYFTQTMLQPNLMKYLDLV
ALGTVCDMMTLTGLNRAFVSSGLKVMQQRQNIGIKTLYDMAGLNEIPKCYHLGFILGPRINAGGRVGKSSLGANLLSTSC
SNEASKLAEELEKHNNERKVIELLMIEEATEIALTQQDSSLLFIVKEGWHPGVIGIVAGRLKEKFDKPVAVVALNDGIGK
ASCRSILGIDFGAEIINAKSKDLLIAGGGHAMAAGFTVTAEKLQELQNFFNNAFRISINTLENYKHAEYDIDLTVDGVNF
HLMEELNTLEPFGQGNHEPIFKFDDLFVLKAYIVGSKHIKCMLVPNKRSFGNKALSAIAFNSVGTSFEDVLLSPKAKNIA
AIGTLKTNNWQDNYTIQLIIKDILLRE
>Mature_587_residues
MKTQTSINGKIWQQKLIHEDIVTELCRSFKISDLLARIVSLRVNNLEEVENFLIPKIKNLLPDPFHLLDMKKAVDRTVKA
ILNNQKICIFADYDVDGATSAALLKNVFRDLNIICDIYVPDRIAEGYGPTPFAMQKIKDKDTELLITVDCGAMAYEAIKY
AKDLNLDVIVIDHHIATEILPDAVAIVNPNRIDEKSEYKHLAAVGVAFLFATAILSHLKKQNYFTQTMLQPNLMKYLDLV
ALGTVCDMMTLTGLNRAFVSSGLKVMQQRQNIGIKTLYDMAGLNEIPKCYHLGFILGPRINAGGRVGKSSLGANLLSTSC
SNEASKLAEELEKHNNERKVIELLMIEEATEIALTQQDSSLLFIVKEGWHPGVIGIVAGRLKEKFDKPVAVVALNDGIGK
ASCRSILGIDFGAEIINAKSKDLLIAGGGHAMAAGFTVTAEKLQELQNFFNNAFRISINTLENYKHAEYDIDLTVDGVNF
HLMEELNTLEPFGQGNHEPIFKFDDLFVLKAYIVGSKHIKCMLVPNKRSFGNKALSAIAFNSVGTSFEDVLLSPKAKNIA
AIGTLKTNNWQDNYTIQLIIKDILLRE

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=570, Percent_Identity=33.5087719298246, Blast_Score=254, Evalue=9e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.-

Molecular weight: Translated: 65155; Mature: 65155

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTQTSINGKIWQQKLIHEDIVTELCRSFKISDLLARIVSLRVNNLEEVENFLIPKIKNL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LPDPFHLLDMKKAVDRTVKAILNNQKICIFADYDVDGATSAALLKNVFRDLNIICDIYVP
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECC
DRIAEGYGPTPFAMQKIKDKDTELLITVDCGAMAYEAIKYAKDLNLDVIVIDHHIATEIL
HHHHCCCCCCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHCCCEEEEEECCHHHHHHC
PDAVAIVNPNRIDEKSEYKHLAAVGVAFLFATAILSHLKKQNYFTQTMLQPNLMKYLDLV
CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHH
ALGTVCDMMTLTGLNRAFVSSGLKVMQQRQNIGIKTLYDMAGLNEIPKCYHLGFILGPRI
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHEEEEEECCCC
NAGGRVGKSSLGANLLSTSCSNEASKLAEELEKHNNERKVIELLMIEEATEIALTQQDSS
CCCCCCCCHHHCCHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECCCC
LLFIVKEGWHPGVIGIVAGRLKEKFDKPVAVVALNDGIGKASCRSILGIDFGAEIINAKS
EEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHCCCC
KDLLIAGGGHAMAAGFTVTAEKLQELQNFFNNAFRISINTLENYKHAEYDIDLTVDGVNF
CCEEEECCCCEEECCEEEEHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEEEEEECCCCH
HLMEELNTLEPFGQGNHEPIFKFDDLFVLKAYIVGSKHIKCMLVPNKRSFGNKALSAIAF
HHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHH
NSVGTSFEDVLLSPKAKNIAAIGTLKTNNWQDNYTIQLIIKDILLRE
HCCCCCHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEEHHHHHCC
>Mature Secondary Structure
MKTQTSINGKIWQQKLIHEDIVTELCRSFKISDLLARIVSLRVNNLEEVENFLIPKIKNL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LPDPFHLLDMKKAVDRTVKAILNNQKICIFADYDVDGATSAALLKNVFRDLNIICDIYVP
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECC
DRIAEGYGPTPFAMQKIKDKDTELLITVDCGAMAYEAIKYAKDLNLDVIVIDHHIATEIL
HHHHCCCCCCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHCCCEEEEEECCHHHHHHC
PDAVAIVNPNRIDEKSEYKHLAAVGVAFLFATAILSHLKKQNYFTQTMLQPNLMKYLDLV
CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHH
ALGTVCDMMTLTGLNRAFVSSGLKVMQQRQNIGIKTLYDMAGLNEIPKCYHLGFILGPRI
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHEEEEEECCCC
NAGGRVGKSSLGANLLSTSCSNEASKLAEELEKHNNERKVIELLMIEEATEIALTQQDSS
CCCCCCCCHHHCCHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECCCC
LLFIVKEGWHPGVIGIVAGRLKEKFDKPVAVVALNDGIGKASCRSILGIDFGAEIINAKS
EEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHCCCC
KDLLIAGGGHAMAAGFTVTAEKLQELQNFFNNAFRISINTLENYKHAEYDIDLTVDGVNF
CCEEEECCCCEEECCEEEEHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEEEEEECCCCH
HLMEELNTLEPFGQGNHEPIFKFDDLFVLKAYIVGSKHIKCMLVPNKRSFGNKALSAIAF
HHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHH
NSVGTSFEDVLLSPKAKNIAAIGTLKTNNWQDNYTIQLIIKDILLRE
HCCCCCHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]