| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
Click here to switch to the map view.
The map label for this gene is 157825811
Identifier: 157825811
GI number: 157825811
Start: 672089
End: 672433
Strand: Direct
Name: 157825811
Synonym: A1C_03730
Alternate gene names: NA
Gene position: 672089-672433 (Clockwise)
Preceding gene: 157825810
Following gene: 157825812
Centisome position: 54.59
GC content: 26.38
Gene sequence:
>345_bases ATGGATTTAAATAATTCTATTGTTAAAATCGTAATATATACTGACAAGCTTTTTGAGCATTTCGTTACATATTATTGCAC TTCATATACACAATATGATTTAAACTTTAAAATATATTTAAAACCTGAAACGGTAAAATATAATCAGACTATAATTAATC AATATAGCAAAACATGTAAAGCCGTTTTCGGAAATAGTAAATGCCAAATAGATAAAGCTTTATATAGCGGTATATATAAT AATGTTAAAGAAATGCTCAAGGCAAGTTTAAAGATAAAGAAAACGGCTATTATGACGGAGGTCGAATTATATTCGGCAAA AATCATTTTAGCAGTACAGTTCTAA
Upstream 100 bases:
>100_bases GAATTCCGGTTTAGATGTCAAAGAAGCGGAATTTAACAATTCTGCACAAAATCATATAATCTTGGAAGGGTATTTTGAAG AAAACTGCATTATGACGACA
Downstream 100 bases:
>100_bases GCAATGTCAGTGATTTGATTATATTAGACGATATTATACAAGATTATGCTAAAGATACAGAGGAAGTAAACATTATTGCC GGATGTGATAAAAATTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MDLNNSIVKIVIYTDKLFEHFVTYYCTSYTQYDLNFKIYLKPETVKYNQTIINQYSKTCKAVFGNSKCQIDKALYSGIYN NVKEMLKASLKIKKTAIMTEVELYSAKIILAVQF
Sequences:
>Translated_114_residues MDLNNSIVKIVIYTDKLFEHFVTYYCTSYTQYDLNFKIYLKPETVKYNQTIINQYSKTCKAVFGNSKCQIDKALYSGIYN NVKEMLKASLKIKKTAIMTEVELYSAKIILAVQF >Mature_114_residues MDLNNSIVKIVIYTDKLFEHFVTYYCTSYTQYDLNFKIYLKPETVKYNQTIINQYSKTCKAVFGNSKCQIDKALYSGIYN NVKEMLKASLKIKKTAIMTEVELYSAKIILAVQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13298; Mature: 13298
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLNNSIVKIVIYTDKLFEHFVTYYCTSYTQYDLNFKIYLKPETVKYNQTIINQYSKTCK CCCCCCEEEEEEEEHHHHHHHHHHHHCCCEEEECEEEEEECCCCEEHHHHHHHHHHHHHH AVFGNSKCQIDKALYSGIYNNVKEMLKASLKIKKTAIMTEVELYSAKIILAVQF HHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC >Mature Secondary Structure MDLNNSIVKIVIYTDKLFEHFVTYYCTSYTQYDLNFKIYLKPETVKYNQTIINQYSKTCK CCCCCCEEEEEEEEHHHHHHHHHHHHCCCEEEECEEEEEECCCCEEHHHHHHHHHHHHHH AVFGNSKCQIDKALYSGIYNNVKEMLKASLKIKKTAIMTEVELYSAKIILAVQF HHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA