| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825808
Identifier: 157825808
GI number: 157825808
Start: 670773
End: 671345
Strand: Direct
Name: 157825808
Synonym: A1C_03715
Alternate gene names: NA
Gene position: 670773-671345 (Clockwise)
Preceding gene: 157825807
Following gene: 157825809
Centisome position: 54.49
GC content: 31.24
Gene sequence:
>573_bases ATGTATCATGATTTTATCTATAATTTTCGGCTCAGTTTGTATAAATTACTTATAAACGATAATGAAATAAACACTAAGAT TAACAAAATATATTTTGCCGTTGTTCAGGATGCAAAATGTCCGTTCTTACTTATTAATATATTGAATGTTAATAATGTAT CTACTAATGTACAAAATATAATACAGCTGGAATTTGAAAGATGTATTTTTACTAATGATAAAAATCGTAATATTGCTCTA AGCCTTGCTAGTAAAATAAGCGATCAAATAGAACATTACTCATTTGAAAATGTTGCATGGATAAAAGCAAATAAAATAGA GTTGCAAGCTAGCAAAGATTTAGTCAATACAAAACTGGTAATGAATTATCATGCGTTGTTGAAAAGCCATCTGTGTTCTA GTAGCGTGACAGGTGTGGTCTGTATGGATATCCAAGTCGTCATTGCGAGCGACATTTGGTCATGTGGCAATCAAGAAAAA CTTGTAAAAATGAATTTTCACGATATACGCATGCCGGAATTTAAGTTTTGCGGTCGGAAAGCCGTAATTGTCTACTTCTC ATGCTATAACTAA
Upstream 100 bases:
>100_bases CTAAAATGCGTATTTTTTAAAGAACGGAAATTTGAAATTAAACGGATTATTAATGTTGAAGCAAAAAGCAAATTTTTAAA TATAGTAGCGTTGGAAATAT
Downstream 100 bases:
>100_bases ATCAGGTCTAGAAGCAAGACATTTAGACTACAACTATGGCTGTCAAAAATATTTAATCAACAATGCAAAGTTAAGCAGTA CTAAATTTGAGCAATGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MYHDFIYNFRLSLYKLLINDNEINTKINKIYFAVVQDAKCPFLLINILNVNNVSTNVQNIIQLEFERCIFTNDKNRNIAL SLASKISDQIEHYSFENVAWIKANKIELQASKDLVNTKLVMNYHALLKSHLCSSSVTGVVCMDIQVVIASDIWSCGNQEK LVKMNFHDIRMPEFKFCGRKAVIVYFSCYN
Sequences:
>Translated_190_residues MYHDFIYNFRLSLYKLLINDNEINTKINKIYFAVVQDAKCPFLLINILNVNNVSTNVQNIIQLEFERCIFTNDKNRNIAL SLASKISDQIEHYSFENVAWIKANKIELQASKDLVNTKLVMNYHALLKSHLCSSSVTGVVCMDIQVVIASDIWSCGNQEK LVKMNFHDIRMPEFKFCGRKAVIVYFSCYN >Mature_190_residues MYHDFIYNFRLSLYKLLINDNEINTKINKIYFAVVQDAKCPFLLINILNVNNVSTNVQNIIQLEFERCIFTNDKNRNIAL SLASKISDQIEHYSFENVAWIKANKIELQASKDLVNTKLVMNYHALLKSHLCSSSVTGVVCMDIQVVIASDIWSCGNQEK LVKMNFHDIRMPEFKFCGRKAVIVYFSCYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22018; Mature: 22018
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHDFIYNFRLSLYKLLINDNEINTKINKIYFAVVQDAKCPFLLINILNVNNVSTNVQNI CCCHHHHHHHHEEEEEEECCCCCCCHHHEEEEEEEECCCCCEEEEEEEECCCCCCCHHHH IQLEFERCIFTNDKNRNIALSLASKISDQIEHYSFENVAWIKANKIELQASKDLVNTKLV HHHEEEEEEEECCCCCEEEEEEHHHHHHHHHHCCCCCEEEEEECEEEEEECCCHHHHHHH MNYHALLKSHLCSSSVTGVVCMDIQVVIASDIWSCGNQEKLVKMNFHDIRMPEFKFCGRK HHHHHHHHHHHCCCCCCEEEEEEEEEEEEHHHHCCCCCCEEEEECCCCCCCCCHHHCCCE AVIVYFSCYN EEEEEEEECC >Mature Secondary Structure MYHDFIYNFRLSLYKLLINDNEINTKINKIYFAVVQDAKCPFLLINILNVNNVSTNVQNI CCCHHHHHHHHEEEEEEECCCCCCCHHHEEEEEEEECCCCCEEEEEEEECCCCCCCHHHH IQLEFERCIFTNDKNRNIALSLASKISDQIEHYSFENVAWIKANKIELQASKDLVNTKLV HHHEEEEEEEECCCCCEEEEEEHHHHHHHHHHCCCCCEEEEEECEEEEEECCCHHHHHHH MNYHALLKSHLCSSSVTGVVCMDIQVVIASDIWSCGNQEKLVKMNFHDIRMPEFKFCGRK HHHHHHHHHHHCCCCCCEEEEEEEEEEEEHHHHCCCCCCEEEEECCCCCCCCCHHHCCCE AVIVYFSCYN EEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA