Definition | Rickettsia akari str. Hartford, complete genome. |
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Accession | NC_009881 |
Length | 1,231,060 |
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The map label for this gene is yleA [C]
Identifier: 157825701
GI number: 157825701
Start: 567323
End: 568573
Strand: Direct
Name: yleA [C]
Synonym: A1C_03135
Alternate gene names: 157825701
Gene position: 567323-568573 (Clockwise)
Preceding gene: 157825700
Following gene: 157825702
Centisome position: 46.08
GC content: 36.61
Gene sequence:
>1251_bases ATGAGCAATAATTTAAGGCAAGAAGTAATAACATTTGGCTGTAGACTTAATATTTACGAAAGTGAGATAATACGAAAAAA CTTGGCATTATCTGGTATCGATAATGTGGCAATATTCAATACTTGTGCAGTAACTAAAGCAGCTGAGAAACAAGCAAGAC AAGCTATCCGCAAGGCTAAAAAGAATAATCCCAATTTAAAAATTATCGTTACAGGTTGTAGTGCTCAAACAAGTCCGCAA ATGTACGGTAATATGCCGGAAGTTGACAAAGTTATAGGTAATGAAGAGAAGTTATTACATAATTACTACCAAATTACCGA TGAAAAAATAGCAGTTAACGATATAATGTCGGTGAAAGAGACGGTAGGTCATTTAGTAAGTAGCTTTGACGGTAAATCTC GTGCTTTTATTCAGGTACAAAACGGTTGTGATCATTTTTGTACTTTCTGTATTATCCCTTACGGTAGAGGTAAAAGTAGA TCAGTACCAATAGGCGCTATAGCAGAGCAGGTAAAGTATTTAGTACTAAACGGTTTTAAAGAAGTAGTTTTTACCGGTGT TGACGTTACCGCTTACGGTTCAGATTTACCCGGAAGCCCAACATTTGCACAAATGATTAAACGAGTTTTAAATTTAGTGC CTGAACTAAAAAGGCTTCGTTTATCTTCAATAGATGTTGCAGAAATAGATGATGAACTTTTTGAGCTTATAGCTTATAGT GAGAGGATAATGCCGCATTTTCATATTAGCTTGCAAGCAGGCGATGAGATGATATTAAAACGTATGAAAAGACGGCATAC TAGGGCAAAGGTAATAGAGTTTTGCCGGAAGCTGCGGGCAATAAGACCGGAAGTATCTTTTGGTGCGGATATTATAGCTG GTTTCCCGACTGAAACTCCTGAAATGTTTGACAATACAAGAAAATTAATTTCAGAAGCGGCATTACAATATTTACATGTT TTTCCTTATTCGGAAAGAGAAGGAACGCCTGCAGCACGTATGCCGCAAGTACCGAAAACTATAAGGAAAGAAAGAGCTGA AATTCTAAGACAAGAGGGGCAGAATCAGCTATCTGAGTTCTTTAAGAAGCATATAGGTCAGAAAGTAGAGTTATTGGTAG AGAATAATAATATCGCCCATACCGAAAATTTTATTCCGGTAAAGCTAGACACACCTTTAGAAATAGGGCAGATATTTAAA GCGAAGTTGATAGGTATAGAAGAGGGATATATGAAGTGTGTGTTGGTTTAA
Upstream 100 bases:
>100_bases ATGGTGGTATTTAAGCATGGCATCCTTACTATGAAAGAAGAAAACGGTAATATAATAATGCAAGGGTCTGCTAAATTAGT TGCTCAAGGGGAGTATTATT
Downstream 100 bases:
>100_bases TATGTCACCACGTGGTTTTGACCACGATATCCAGACAATTTTCAAAAAAACTGGACCCCGTGGTCAAGCCATTGGGTGAC AAAACAAAATAAAAAAAATC
Product: MiaB-like tRNA modifying enzyme
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MSNNLRQEVITFGCRLNIYESEIIRKNLALSGIDNVAIFNTCAVTKAAEKQARQAIRKAKKNNPNLKIIVTGCSAQTSPQ MYGNMPEVDKVIGNEEKLLHNYYQITDEKIAVNDIMSVKETVGHLVSSFDGKSRAFIQVQNGCDHFCTFCIIPYGRGKSR SVPIGAIAEQVKYLVLNGFKEVVFTGVDVTAYGSDLPGSPTFAQMIKRVLNLVPELKRLRLSSIDVAEIDDELFELIAYS ERIMPHFHISLQAGDEMILKRMKRRHTRAKVIEFCRKLRAIRPEVSFGADIIAGFPTETPEMFDNTRKLISEAALQYLHV FPYSEREGTPAARMPQVPKTIRKERAEILRQEGQNQLSEFFKKHIGQKVELLVENNNIAHTENFIPVKLDTPLEIGQIFK AKLIGIEEGYMKCVLV
Sequences:
>Translated_416_residues MSNNLRQEVITFGCRLNIYESEIIRKNLALSGIDNVAIFNTCAVTKAAEKQARQAIRKAKKNNPNLKIIVTGCSAQTSPQ MYGNMPEVDKVIGNEEKLLHNYYQITDEKIAVNDIMSVKETVGHLVSSFDGKSRAFIQVQNGCDHFCTFCIIPYGRGKSR SVPIGAIAEQVKYLVLNGFKEVVFTGVDVTAYGSDLPGSPTFAQMIKRVLNLVPELKRLRLSSIDVAEIDDELFELIAYS ERIMPHFHISLQAGDEMILKRMKRRHTRAKVIEFCRKLRAIRPEVSFGADIIAGFPTETPEMFDNTRKLISEAALQYLHV FPYSEREGTPAARMPQVPKTIRKERAEILRQEGQNQLSEFFKKHIGQKVELLVENNNIAHTENFIPVKLDTPLEIGQIFK AKLIGIEEGYMKCVLV >Mature_415_residues SNNLRQEVITFGCRLNIYESEIIRKNLALSGIDNVAIFNTCAVTKAAEKQARQAIRKAKKNNPNLKIIVTGCSAQTSPQM YGNMPEVDKVIGNEEKLLHNYYQITDEKIAVNDIMSVKETVGHLVSSFDGKSRAFIQVQNGCDHFCTFCIIPYGRGKSRS VPIGAIAEQVKYLVLNGFKEVVFTGVDVTAYGSDLPGSPTFAQMIKRVLNLVPELKRLRLSSIDVAEIDDELFELIAYSE RIMPHFHISLQAGDEMILKRMKRRHTRAKVIEFCRKLRAIRPEVSFGADIIAGFPTETPEMFDNTRKLISEAALQYLHVF PYSEREGTPAARMPQVPKTIRKERAEILRQEGQNQLSEFFKKHIGQKVELLVENNNIAHTENFIPVKLDTPLEIGQIFKA KLIGIEEGYMKCVLV
Specific function: Unknown
COG id: COG0621
COG function: function code J; 2-methylthioadenine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MTTase N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI28872784, Length=412, Percent_Identity=26.9417475728155, Blast_Score=142, Evalue=7e-34, Organism=Homo sapiens, GI28872782, Length=412, Percent_Identity=26.9417475728155, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI93277076, Length=390, Percent_Identity=26.9230769230769, Blast_Score=135, Evalue=1e-31, Organism=Escherichia coli, GI1786882, Length=423, Percent_Identity=29.5508274231678, Blast_Score=165, Evalue=5e-42, Organism=Escherichia coli, GI1787057, Length=391, Percent_Identity=29.923273657289, Blast_Score=155, Evalue=6e-39, Organism=Caenorhabditis elegans, GI17553146, Length=424, Percent_Identity=26.1792452830189, Blast_Score=150, Evalue=8e-37, Organism=Caenorhabditis elegans, GI71996771, Length=249, Percent_Identity=25.7028112449799, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI21356207, Length=427, Percent_Identity=26.6978922716628, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI19922432, Length=365, Percent_Identity=27.1232876712329, Blast_Score=132, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR020612 - InterPro: IPR013848 - InterPro: IPR006467 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM; PF00919 UPF0004 [H]
EC number: NA
Molecular weight: Translated: 47007; Mature: 46876
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS01278 UPF0004
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNNLRQEVITFGCRLNIYESEIIRKNLALSGIDNVAIFNTCAVTKAAEKQARQAIRKAK CCCHHHHHHHHHHCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KNNPNLKIIVTGCSAQTSPQMYGNMPEVDKVIGNEEKLLHNYYQITDEKIAVNDIMSVKE CCCCCEEEEEECCCCCCCHHHCCCCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHH TVGHLVSSFDGKSRAFIQVQNGCDHFCTFCIIPYGRGKSRSVPIGAIAEQVKYLVLNGFK HHHHHHHHCCCCCEEEEEECCCCHHEEHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH EVVFTGVDVTAYGSDLPGSPTFAQMIKRVLNLVPELKRLRLSSIDVAEIDDELFELIAYS HHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ERIMPHFHISLQAGDEMILKRMKRRHTRAKVIEFCRKLRAIRPEVSFGADIIAGFPTETP HHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEECCCCCCH EMFDNTRKLISEAALQYLHVFPYSEREGTPAARMPQVPKTIRKERAEILRQEGQNQLSEF HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHH FKKHIGQKVELLVENNNIAHTENFIPVKLDTPLEIGQIFKAKLIGIEEGYMKCVLV HHHHCCCEEEEEEECCCEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEC >Mature Secondary Structure SNNLRQEVITFGCRLNIYESEIIRKNLALSGIDNVAIFNTCAVTKAAEKQARQAIRKAK CCHHHHHHHHHHCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KNNPNLKIIVTGCSAQTSPQMYGNMPEVDKVIGNEEKLLHNYYQITDEKIAVNDIMSVKE CCCCCEEEEEECCCCCCCHHHCCCCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHH TVGHLVSSFDGKSRAFIQVQNGCDHFCTFCIIPYGRGKSRSVPIGAIAEQVKYLVLNGFK HHHHHHHHCCCCCEEEEEECCCCHHEEHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH EVVFTGVDVTAYGSDLPGSPTFAQMIKRVLNLVPELKRLRLSSIDVAEIDDELFELIAYS HHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ERIMPHFHISLQAGDEMILKRMKRRHTRAKVIEFCRKLRAIRPEVSFGADIIAGFPTETP HHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEECCCCCCH EMFDNTRKLISEAALQYLHVFPYSEREGTPAARMPQVPKTIRKERAEILRQEGQNQLSEF HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHH FKKHIGQKVELLVENNNIAHTENFIPVKLDTPLEIGQIFKAKLIGIEEGYMKCVLV HHHHCCCEEEEEEECCCEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]