Definition Rickettsia akari str. Hartford, complete genome.
Accession NC_009881
Length 1,231,060

Click here to switch to the map view.

The map label for this gene is 157825670

Identifier: 157825670

GI number: 157825670

Start: 533895

End: 534890

Strand: Reverse

Name: 157825670

Synonym: A1C_02960

Alternate gene names: NA

Gene position: 534890-533895 (Counterclockwise)

Preceding gene: 157825678

Following gene: 157825669

Centisome position: 43.45

GC content: 29.62

Gene sequence:

>996_bases
ATGCAGAAATTTTTATCTTTAATCATTGTCATCCTAATACTTTACAATATAGTAAAGTTAAAAATATCTCCCGACAACAA
TAATCCTACAACTATAGAGCAAACGGCTTCAAATAATTCATCTACCGATGAAAACCAAGCTAGTATCAATAAGGAACCAC
CTGTTTCATTAAACGGTAATTTATTTGAACGTACGGTTTCAAAAATAGTGATAAATGCTCTTAAAACCGAAGAAGGGAAA
GCATTTTTTGAAAATATTTTACAACCGTTAAATGGACCTATTAATCCTAATGATTACACTATTGAAGTACGTAAGGATTT
AGTCAAAACACTATTCAAAATTAATACGCTCGGTAGCGGTAATATCGGTCCCGCTTCTTGCGGACATGTAGTTACCGTAT
TTTATCAAATATCAGATATGAACAATACTTTAATATCTGAAGATACTAAAACTTTTACTTTAGGCTCTGCTCCTGTAATG
CTTGGCTTAGATAATGTAATAATTGGTATGATGGTAGGAGAAGCACGAGAAGCTATTATTCCGGCCAAATATGCCGTTAA
TAATAGTAATAATATTATCTTCGATGATGCTTATAATTATAAAGTTAATGTAATTTTAAAATCCATATTACCGAAAAATT
TTGTTAAAAATAATGAAGTAAAAATTTATGATGATGAGATAGCTTATCGTGTTCCTTTATTATGTGGTGAAAAAGTACGC
TTTAATGCTAAAATTACTCGCTTATCAAACGGTAAAATACTATATGATTCTAAAGCAAAAGGACAACAAATAGAGATGAA
AATTGGCGATATTACATATCCTTTAATTTTTTCTTACGCCTTGCAAGGTAAAGTAACGGTTGGCACACGCAGTGTTATTG
CAGAAGGAAAAACTTTTAAAGCCTTAGGTTCTAATATAAATAAAATTATTTCTCATGAATTATTACCGATAAATGAATAT
CTTTTACTTGAACTTAATGATTTTAAACAAAATTAA

Upstream 100 bases:

>100_bases
CGTATATATGATACGTGAGCAAAGGCGAGTCATGTAAAATTCGCTTGTATTGAGATTTCTGAAATAGCTACAGCCAATTT
TTCAAATTAAATGAGTATAT

Downstream 100 bases:

>100_bases
ATAAATATGAAACAAACTAAAATATCGGATAATAAAAAACAAAAAAATTATATTTTATTATCTCTCCTTGTAATAATGAT
AATAATTGTATATCTTGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MQKFLSLIIVILILYNIVKLKISPDNNNPTTIEQTASNNSSTDENQASINKEPPVSLNGNLFERTVSKIVINALKTEEGK
AFFENILQPLNGPINPNDYTIEVRKDLVKTLFKINTLGSGNIGPASCGHVVTVFYQISDMNNTLISEDTKTFTLGSAPVM
LGLDNVIIGMMVGEAREAIIPAKYAVNNSNNIIFDDAYNYKVNVILKSILPKNFVKNNEVKIYDDEIAYRVPLLCGEKVR
FNAKITRLSNGKILYDSKAKGQQIEMKIGDITYPLIFSYALQGKVTVGTRSVIAEGKTFKALGSNINKIISHELLPINEY
LLLELNDFKQN

Sequences:

>Translated_331_residues
MQKFLSLIIVILILYNIVKLKISPDNNNPTTIEQTASNNSSTDENQASINKEPPVSLNGNLFERTVSKIVINALKTEEGK
AFFENILQPLNGPINPNDYTIEVRKDLVKTLFKINTLGSGNIGPASCGHVVTVFYQISDMNNTLISEDTKTFTLGSAPVM
LGLDNVIIGMMVGEAREAIIPAKYAVNNSNNIIFDDAYNYKVNVILKSILPKNFVKNNEVKIYDDEIAYRVPLLCGEKVR
FNAKITRLSNGKILYDSKAKGQQIEMKIGDITYPLIFSYALQGKVTVGTRSVIAEGKTFKALGSNINKIISHELLPINEY
LLLELNDFKQN
>Mature_331_residues
MQKFLSLIIVILILYNIVKLKISPDNNNPTTIEQTASNNSSTDENQASINKEPPVSLNGNLFERTVSKIVINALKTEEGK
AFFENILQPLNGPINPNDYTIEVRKDLVKTLFKINTLGSGNIGPASCGHVVTVFYQISDMNNTLISEDTKTFTLGSAPVM
LGLDNVIIGMMVGEAREAIIPAKYAVNNSNNIIFDDAYNYKVNVILKSILPKNFVKNNEVKIYDDEIAYRVPLLCGEKVR
FNAKITRLSNGKILYDSKAKGQQIEMKIGDITYPLIFSYALQGKVTVGTRSVIAEGKTFKALGSNINKIISHELLPINEY
LLLELNDFKQN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase FKBP-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001179 [H]

Pfam domain/function: PF00254 FKBP_C [H]

EC number: NA

Molecular weight: Translated: 36768; Mature: 36768

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: PS50059 FKBP_PPIASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKFLSLIIVILILYNIVKLKISPDNNNPTTIEQTASNNSSTDENQASINKEPPVSLNGN
CHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCH
LFERTVSKIVINALKTEEGKAFFENILQPLNGPINPNDYTIEVRKDLVKTLFKINTLGSG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHCCCCCC
NIGPASCGHVVTVFYQISDMNNTLISEDTKTFTLGSAPVMLGLDNVIIGMMVGEAREAII
CCCCCCCCCEEEEEEEEECCCCCEECCCCCEEEECCCCEEEEHHHHHEEEHHCCHHHHCC
PAKYAVNNSNNIIFDDAYNYKVNVILKSILPKNFVKNNEVKIYDDEIAYRVPLLCGEKVR
CCEEEECCCCCEEEECCCCEEEEEHHHHHCCHHHCCCCCEEEEECCEEEEECCEECCEEE
FNAKITRLSNGKILYDSKAKGQQIEMKIGDITYPLIFSYALQGKVTVGTRSVIAEGKTFK
EEEEEEEECCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCEEEECCHHHHHCCCCHH
ALGSNINKIISHELLPINEYLLLELNDFKQN
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MQKFLSLIIVILILYNIVKLKISPDNNNPTTIEQTASNNSSTDENQASINKEPPVSLNGN
CHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCH
LFERTVSKIVINALKTEEGKAFFENILQPLNGPINPNDYTIEVRKDLVKTLFKINTLGSG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHCCCCCC
NIGPASCGHVVTVFYQISDMNNTLISEDTKTFTLGSAPVMLGLDNVIIGMMVGEAREAII
CCCCCCCCCEEEEEEEEECCCCCEECCCCCEEEECCCCEEEEHHHHHEEEHHCCHHHHCC
PAKYAVNNSNNIIFDDAYNYKVNVILKSILPKNFVKNNEVKIYDDEIAYRVPLLCGEKVR
CCEEEECCCCCEEEECCCCEEEEEHHHHHCCHHHCCCCCEEEEECCEEEEECCEECCEEE
FNAKITRLSNGKILYDSKAKGQQIEMKIGDITYPLIFSYALQGKVTVGTRSVIAEGKTFK
EEEEEEEECCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCEEEECCHHHHHCCCCHH
ALGSNINKIISHELLPINEYLLLELNDFKQN
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]