Definition | Rickettsia akari str. Hartford, complete genome. |
---|---|
Accession | NC_009881 |
Length | 1,231,060 |
Click here to switch to the map view.
The map label for this gene is 157825670
Identifier: 157825670
GI number: 157825670
Start: 533895
End: 534890
Strand: Reverse
Name: 157825670
Synonym: A1C_02960
Alternate gene names: NA
Gene position: 534890-533895 (Counterclockwise)
Preceding gene: 157825678
Following gene: 157825669
Centisome position: 43.45
GC content: 29.62
Gene sequence:
>996_bases ATGCAGAAATTTTTATCTTTAATCATTGTCATCCTAATACTTTACAATATAGTAAAGTTAAAAATATCTCCCGACAACAA TAATCCTACAACTATAGAGCAAACGGCTTCAAATAATTCATCTACCGATGAAAACCAAGCTAGTATCAATAAGGAACCAC CTGTTTCATTAAACGGTAATTTATTTGAACGTACGGTTTCAAAAATAGTGATAAATGCTCTTAAAACCGAAGAAGGGAAA GCATTTTTTGAAAATATTTTACAACCGTTAAATGGACCTATTAATCCTAATGATTACACTATTGAAGTACGTAAGGATTT AGTCAAAACACTATTCAAAATTAATACGCTCGGTAGCGGTAATATCGGTCCCGCTTCTTGCGGACATGTAGTTACCGTAT TTTATCAAATATCAGATATGAACAATACTTTAATATCTGAAGATACTAAAACTTTTACTTTAGGCTCTGCTCCTGTAATG CTTGGCTTAGATAATGTAATAATTGGTATGATGGTAGGAGAAGCACGAGAAGCTATTATTCCGGCCAAATATGCCGTTAA TAATAGTAATAATATTATCTTCGATGATGCTTATAATTATAAAGTTAATGTAATTTTAAAATCCATATTACCGAAAAATT TTGTTAAAAATAATGAAGTAAAAATTTATGATGATGAGATAGCTTATCGTGTTCCTTTATTATGTGGTGAAAAAGTACGC TTTAATGCTAAAATTACTCGCTTATCAAACGGTAAAATACTATATGATTCTAAAGCAAAAGGACAACAAATAGAGATGAA AATTGGCGATATTACATATCCTTTAATTTTTTCTTACGCCTTGCAAGGTAAAGTAACGGTTGGCACACGCAGTGTTATTG CAGAAGGAAAAACTTTTAAAGCCTTAGGTTCTAATATAAATAAAATTATTTCTCATGAATTATTACCGATAAATGAATAT CTTTTACTTGAACTTAATGATTTTAAACAAAATTAA
Upstream 100 bases:
>100_bases CGTATATATGATACGTGAGCAAAGGCGAGTCATGTAAAATTCGCTTGTATTGAGATTTCTGAAATAGCTACAGCCAATTT TTCAAATTAAATGAGTATAT
Downstream 100 bases:
>100_bases ATAAATATGAAACAAACTAAAATATCGGATAATAAAAAACAAAAAAATTATATTTTATTATCTCTCCTTGTAATAATGAT AATAATTGTATATCTTGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MQKFLSLIIVILILYNIVKLKISPDNNNPTTIEQTASNNSSTDENQASINKEPPVSLNGNLFERTVSKIVINALKTEEGK AFFENILQPLNGPINPNDYTIEVRKDLVKTLFKINTLGSGNIGPASCGHVVTVFYQISDMNNTLISEDTKTFTLGSAPVM LGLDNVIIGMMVGEAREAIIPAKYAVNNSNNIIFDDAYNYKVNVILKSILPKNFVKNNEVKIYDDEIAYRVPLLCGEKVR FNAKITRLSNGKILYDSKAKGQQIEMKIGDITYPLIFSYALQGKVTVGTRSVIAEGKTFKALGSNINKIISHELLPINEY LLLELNDFKQN
Sequences:
>Translated_331_residues MQKFLSLIIVILILYNIVKLKISPDNNNPTTIEQTASNNSSTDENQASINKEPPVSLNGNLFERTVSKIVINALKTEEGK AFFENILQPLNGPINPNDYTIEVRKDLVKTLFKINTLGSGNIGPASCGHVVTVFYQISDMNNTLISEDTKTFTLGSAPVM LGLDNVIIGMMVGEAREAIIPAKYAVNNSNNIIFDDAYNYKVNVILKSILPKNFVKNNEVKIYDDEIAYRVPLLCGEKVR FNAKITRLSNGKILYDSKAKGQQIEMKIGDITYPLIFSYALQGKVTVGTRSVIAEGKTFKALGSNINKIISHELLPINEY LLLELNDFKQN >Mature_331_residues MQKFLSLIIVILILYNIVKLKISPDNNNPTTIEQTASNNSSTDENQASINKEPPVSLNGNLFERTVSKIVINALKTEEGK AFFENILQPLNGPINPNDYTIEVRKDLVKTLFKINTLGSGNIGPASCGHVVTVFYQISDMNNTLISEDTKTFTLGSAPVM LGLDNVIIGMMVGEAREAIIPAKYAVNNSNNIIFDDAYNYKVNVILKSILPKNFVKNNEVKIYDDEIAYRVPLLCGEKVR FNAKITRLSNGKILYDSKAKGQQIEMKIGDITYPLIFSYALQGKVTVGTRSVIAEGKTFKALGSNINKIISHELLPINEY LLLELNDFKQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PPIase FKBP-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001179 [H]
Pfam domain/function: PF00254 FKBP_C [H]
EC number: NA
Molecular weight: Translated: 36768; Mature: 36768
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: PS50059 FKBP_PPIASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKFLSLIIVILILYNIVKLKISPDNNNPTTIEQTASNNSSTDENQASINKEPPVSLNGN CHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCH LFERTVSKIVINALKTEEGKAFFENILQPLNGPINPNDYTIEVRKDLVKTLFKINTLGSG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHCCCCCC NIGPASCGHVVTVFYQISDMNNTLISEDTKTFTLGSAPVMLGLDNVIIGMMVGEAREAII CCCCCCCCCEEEEEEEEECCCCCEECCCCCEEEECCCCEEEEHHHHHEEEHHCCHHHHCC PAKYAVNNSNNIIFDDAYNYKVNVILKSILPKNFVKNNEVKIYDDEIAYRVPLLCGEKVR CCEEEECCCCCEEEECCCCEEEEEHHHHHCCHHHCCCCCEEEEECCEEEEECCEECCEEE FNAKITRLSNGKILYDSKAKGQQIEMKIGDITYPLIFSYALQGKVTVGTRSVIAEGKTFK EEEEEEEECCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCEEEECCHHHHHCCCCHH ALGSNINKIISHELLPINEYLLLELNDFKQN HHHHHHHHHHHHCCCCCCCEEEEEEECCCCC >Mature Secondary Structure MQKFLSLIIVILILYNIVKLKISPDNNNPTTIEQTASNNSSTDENQASINKEPPVSLNGN CHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCH LFERTVSKIVINALKTEEGKAFFENILQPLNGPINPNDYTIEVRKDLVKTLFKINTLGSG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHCCCCCC NIGPASCGHVVTVFYQISDMNNTLISEDTKTFTLGSAPVMLGLDNVIIGMMVGEAREAII CCCCCCCCCEEEEEEEEECCCCCEECCCCCEEEECCCCEEEEHHHHHEEEHHCCHHHHCC PAKYAVNNSNNIIFDDAYNYKVNVILKSILPKNFVKNNEVKIYDDEIAYRVPLLCGEKVR CCEEEECCCCCEEEECCCCEEEEEHHHHHCCHHHCCCCCEEEEECCEEEEECCEECCEEE FNAKITRLSNGKILYDSKAKGQQIEMKIGDITYPLIFSYALQGKVTVGTRSVIAEGKTFK EEEEEEEECCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCEEEECCHHHHHCCCCHH ALGSNINKIISHELLPINEYLLLELNDFKQN HHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]