Definition | Rickettsia akari str. Hartford, complete genome. |
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Accession | NC_009881 |
Length | 1,231,060 |
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The map label for this gene is efeU [H]
Identifier: 157825667
GI number: 157825667
Start: 532428
End: 533276
Strand: Reverse
Name: efeU [H]
Synonym: A1C_02945
Alternate gene names: 157825667
Gene position: 533276-532428 (Counterclockwise)
Preceding gene: 157825668
Following gene: 157825666
Centisome position: 43.32
GC content: 30.15
Gene sequence:
>849_bases ATGTTTAAAATTGCTTTAGTAGTGTTTCGTGAATGTTTAGAAATATCCTTATTACTTGGTTTAATACTCGCCGTAACAAA ACAAATAGCAAAATCTCGTCTTTATATTATTGCCGGAGTAATGCTTGGGGTAGTATTTGCTTCAATTTTTGCATTTTTTG CCCGTAAATTATCTTTATCTTTTGGCGGAATAGGTGACGAACTATTTGATTCCGGCATTATGATACTAATAACAATTTTG ATTAGCTGGACAATAATATGGATGCAAGGTTACGGTATAAAAGTAAAGCAATATATAAATGACTTATCAGTAAAAATTCA TGAAGGTAAAGCCAGTTATTTCATGTTAGTTTTTTTAGTTGCTACTACTATCTTACGAGAAGGTGCAGAAATTATTATTT TAGTATATAGCATATCTTCAGTTGAAACAATATCAAGCAGTATTTACTTGCAAGGAGTGATAATAGGTGCTACAAGTGGC TTCTTACTTGGTTTAGTAATATATTTCGGTTTAATTAAGATTGCTAATCAAAAATATATTTTTAAAATCTCTACTGTGTT GTTGATGCTAATAGCAGGTGGATTTGCAGCAAGTGCTGCAGGTATTTTAACCTCTTCCGGTCTAGTTATGTTTTTATCCG ATCAACTTTGGGATAGTTCATGGTTAGTAGCAGATAGAAGTATGATAGGTAAAATCGTACATATTGTTACCGGTTATATT GCAAGACCTAACGGGCTACAAGTACTTGCCTATTTTACTACTATATTACTGATAAATATTTTTATACAAATAAAATTAAG ATATTCAAAAAATAACTTAATATCAGTACAAAAAAATGAATCAAATTAA
Upstream 100 bases:
>100_bases TATACTTGCACCGCTTAAACCCGGAAAATATGAGATTTTTGGGGATTTTCATCAAGATACGGCTCAGGGTATTATAATTG TTAATGATTAGATAAAAAAT
Downstream 100 bases:
>100_bases TTTTATCAAAGAGAACAATTAAATTAAATATGTTAAAACTTTTATCAGAAATTGGTCCGGTAATAGCGTTTTTTGCAGGC TTTTTTTATGGAGGCGGTAT
Product: FTR1 family protein
Products: NA
Alternate protein names: Fe(2+) ion permease efeU; Ferrous iron uptake protein [H]
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MFKIALVVFRECLEISLLLGLILAVTKQIAKSRLYIIAGVMLGVVFASIFAFFARKLSLSFGGIGDELFDSGIMILITIL ISWTIIWMQGYGIKVKQYINDLSVKIHEGKASYFMLVFLVATTILREGAEIIILVYSISSVETISSSIYLQGVIIGATSG FLLGLVIYFGLIKIANQKYIFKISTVLLMLIAGGFAASAAGILTSSGLVMFLSDQLWDSSWLVADRSMIGKIVHIVTGYI ARPNGLQVLAYFTTILLINIFIQIKLRYSKNNLISVQKNESN
Sequences:
>Translated_282_residues MFKIALVVFRECLEISLLLGLILAVTKQIAKSRLYIIAGVMLGVVFASIFAFFARKLSLSFGGIGDELFDSGIMILITIL ISWTIIWMQGYGIKVKQYINDLSVKIHEGKASYFMLVFLVATTILREGAEIIILVYSISSVETISSSIYLQGVIIGATSG FLLGLVIYFGLIKIANQKYIFKISTVLLMLIAGGFAASAAGILTSSGLVMFLSDQLWDSSWLVADRSMIGKIVHIVTGYI ARPNGLQVLAYFTTILLINIFIQIKLRYSKNNLISVQKNESN >Mature_282_residues MFKIALVVFRECLEISLLLGLILAVTKQIAKSRLYIIAGVMLGVVFASIFAFFARKLSLSFGGIGDELFDSGIMILITIL ISWTIIWMQGYGIKVKQYINDLSVKIHEGKASYFMLVFLVATTILREGAEIIILVYSISSVETISSSIYLQGVIIGATSG FLLGLVIYFGLIKIANQKYIFKISTVLLMLIAGGFAASAAGILTSSGLVMFLSDQLWDSSWLVADRSMIGKIVHIVTGYI ARPNGLQVLAYFTTILLINIFIQIKLRYSKNNLISVQKNESN
Specific function: Functions only as an uptake system for Fe(2+) ion acquisition [H]
COG id: COG0672
COG function: function code P; High-affinity Fe2+/Pb2+ permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004923 [H]
Pfam domain/function: PF03239 FTR1 [H]
EC number: NA
Molecular weight: Translated: 31049; Mature: 31049
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKIALVVFRECLEISLLLGLILAVTKQIAKSRLYIIAGVMLGVVFASIFAFFARKLSLS CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGGIGDELFDSGIMILITILISWTIIWMQGYGIKVKQYINDLSVKIHEGKASYFMLVFLV CCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHEEEEECCCHHHHHHHHHH ATTILREGAEIIILVYSISSVETISSSIYLQGVIIGATSGFLLGLVIYFGLIKIANQKYI HHHHHHCCCEEEEEEEECCHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCHH FKISTVLLMLIAGGFAASAAGILTSSGLVMFLSDQLWDSSWLVADRSMIGKIVHIVTGYI HHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEHHHCCCCCEEHHHHHHHHHHHHHHHHH ARPNGLQVLAYFTTILLINIFIQIKLRYSKNNLISVQKNESN CCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCC >Mature Secondary Structure MFKIALVVFRECLEISLLLGLILAVTKQIAKSRLYIIAGVMLGVVFASIFAFFARKLSLS CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGGIGDELFDSGIMILITILISWTIIWMQGYGIKVKQYINDLSVKIHEGKASYFMLVFLV CCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHEEEEECCCHHHHHHHHHH ATTILREGAEIIILVYSISSVETISSSIYLQGVIIGATSGFLLGLVIYFGLIKIANQKYI HHHHHHCCCEEEEEEEECCHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCHH FKISTVLLMLIAGGFAASAAGILTSSGLVMFLSDQLWDSSWLVADRSMIGKIVHIVTGYI HHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEHHHCCCCCEEHHHHHHHHHHHHHHHHH ARPNGLQVLAYFTTILLINIFIQIKLRYSKNNLISVQKNESN CCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA